RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 ANKRD45Q5TZF3 282 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 SYNJ2O15056 1496 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 PPP2R1AP30153 589 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 CGNL1Q0VF96 1302 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 TRIM6-TRIM34B2RNG4 842 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 ABCC5O15440 1437 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 NAP1L5Q96NT1 182 aaPredicted RBP6.05□□□□□ -1.44
UBR1-201ENST00000290650 RWDD1Q9H446 243 aaPredicted RBP6.05□□□□□ -1.44
UBR1-201ENST00000290650 C1orf115Q9H7X2 142 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 TULP1O00294 542 aaPredicted RBP6.05□□□□□ -1.44
UBR1-201ENST00000290650 TROQ12816 1431 aaPredicted RBP6.05□□□□□ -1.44
UBR1-201ENST00000290650 C20orf194Q5TEA3 1177 aa6.05□□□□□ -1.44
UBR1-201ENST00000290650 PNISRQ8TF01 805 aaKnown RBP6.04□□□□□ -1.44
UBR1-201ENST00000290650 EVC2Q86UK5 1308 aa6.04□□□□□ -1.44
UBR1-201ENST00000290650 CSB-PGBD3P0DP91 1061 aa6.04□□□□□ -1.44
UBR1-201ENST00000290650 PNNQ9H307 717 aaKnown RBP6.04□□□□□ -1.44
UBR1-201ENST00000290650 KAT6BQ8WYB5 2073 aa6.04□□□□□ -1.44
UBR1-201ENST00000290650 PTMAP06454 111 aaKnown RBP6.04□□□□□ -1.44
UBR1-201ENST00000290650 FBLN1P23142 703 aa6.04□□□□□ -1.44
UBR1-201ENST00000290650 GOLGA6L22H0YM25 854 aa6.04□□□□□ -1.44
UBR1-201ENST00000290650 IFT140Q96RY7 1462 aa6.04□□□□□ -1.44
UBR1-201ENST00000290650 EIF2S2P20042 333 aaKnown RBP6.03□□□□□ -1.44
UBR1-201ENST00000290650 CHMP3Q9Y3E7 222 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 IPO8O15397 1037 aaKnown RBP6.03□□□□□ -1.44
UBR1-201ENST00000290650 PMFBP1Q8TBY8 1022 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 RBM33Q96EV2 1170 aaKnown RBP6.03□□□□□ -1.44
UBR1-201ENST00000290650 PRAM1Q96QH2 718 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 VGFO15240 615 aaPredicted RBP6.03□□□□□ -1.44
UBR1-201ENST00000290650 PDE3BQ13370 1112 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 LNPKQ9C0E8 428 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 E9PSI1 815 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 FGD1P98174 961 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 LAMC3Q9Y6N6 1575 aa6.03□□□□□ -1.44
UBR1-201ENST00000290650 TXNDC2Q86VQ3 553 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 ANKRD30BQ9BXX2 1392 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 DNTTIP2Q5QJE6 756 aaKnown RBP6.02□□□□□ -1.45
UBR1-201ENST00000290650 TCP11L2Q8N4U5 519 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 CENPQQ7L2Z9 268 aaPredicted RBP6.02□□□□□ -1.45
UBR1-201ENST00000290650 COG3Q96JB2 828 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 MS4A1P11836 297 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 RILPL2Q969X0 211 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.02□□□□□ -1.45
UBR1-201ENST00000290650 FAM161AQ3B820 660 aa6.02□□□□□ -1.45
UBR1-201ENST00000290650 DIAPH1O60610 1272 aaKnown RBP6.01□□□□□ -1.45
UBR1-201ENST00000290650 HDGFP51858 240 aaKnown RBP6.01□□□□□ -1.45
UBR1-201ENST00000290650 THUMPD2Q9BTF0 503 aaKnown RBP6.01□□□□□ -1.45
UBR1-201ENST00000290650 RRS1Q15050 365 aaKnown RBP6.01□□□□□ -1.45
UBR1-201ENST00000290650 ZKSCAN2Q63HK3 967 aa6.01□□□□□ -1.45
UBR1-201ENST00000290650 GRIN2AQ12879 1464 aa6.01□□□□□ -1.45
UBR1-201ENST00000290650 MIA2Q96PC5 1412 aa6.01□□□□□ -1.45
UBR1-201ENST00000290650 ERBINQ96RT1 1412 aa6.01□□□□□ -1.45
UBR1-201ENST00000290650 NPHP1O15259 732 aa6□□□□□ -1.45
UBR1-201ENST00000290650 RUNDC1Q96C34 613 aa6□□□□□ -1.45
UBR1-201ENST00000290650 EID1Q9Y6B2 187 aa6□□□□□ -1.45
UBR1-201ENST00000290650 MAGI1Q96QZ7 1491 aaPredicted RBP6□□□□□ -1.45
UBR1-201ENST00000290650 WAPLQ7Z5K2 1190 aa6□□□□□ -1.45
UBR1-201ENST00000290650 CABP1Q9NZU7 370 aa6□□□□□ -1.45
UBR1-201ENST00000290650 BRD4O60885 1362 aaPredicted RBP6□□□□□ -1.45
UBR1-201ENST00000290650 KIAA0586Q9BVV6 1533 aa6□□□□□ -1.45
UBR1-201ENST00000290650 IL27Q8NEV9 243 aa6□□□□□ -1.45
UBR1-201ENST00000290650 STK31Q9BXU1 1019 aa6□□□□□ -1.45
UBR1-201ENST00000290650 EXOSC9Q06265 439 aaKnown RBP5.99□□□□□ -1.45
UBR1-201ENST00000290650 DZIP1LQ8IYY4 767 aaKnown RBP5.99□□□□□ -1.45
UBR1-201ENST00000290650 ANO8Q9HCE9 1232 aaPredicted RBP5.99□□□□□ -1.45
UBR1-201ENST00000290650 KIF14Q15058 1648 aa5.99□□□□□ -1.45
UBR1-201ENST00000290650 DISP3Q9P2K9 1392 aa5.99□□□□□ -1.45
UBR1-201ENST00000290650 MIS18AQ9NYP9 233 aa5.99□□□□□ -1.45
UBR1-201ENST00000290650 ADGRF5Q8IZF2 1346 aa5.99□□□□□ -1.45
UBR1-201ENST00000290650 SLC26A8Q96RN1 970 aa5.99□□□□□ -1.45
UBR1-201ENST00000290650 PRKAR2BP31323 418 aa5.99□□□□□ -1.45
UBR1-201ENST00000290650 XPCQ01831 940 aaPredicted RBP5.99□□□□□ -1.45
UBR1-201ENST00000290650 PLEKHH2Q8IVE3 1493 aa5.98□□□□□ -1.45
UBR1-201ENST00000290650 DCTN1Q14203 1278 aa5.98□□□□□ -1.45
UBR1-201ENST00000290650 FBXO31Q5XUX0 539 aaPredicted RBP5.98□□□□□ -1.45
UBR1-201ENST00000290650 CDK19Q9BWU1 502 aa5.98□□□□□ -1.45
UBR1-201ENST00000290650 NCOA1Q15788 1441 aa5.98□□□□□ -1.45
UBR1-201ENST00000290650 CFAP43Q8NDM7 1665 aa5.98□□□□□ -1.45
UBR1-201ENST00000290650 NOB1Q9ULX3 412 aaKnown RBP5.98□□□□□ -1.45
UBR1-201ENST00000290650 RAPGEF6Q8TEU7 1601 aa5.98□□□□□ -1.45
UBR1-201ENST00000290650 AIMP1Q12904 312 aaKnown RBP5.97□□□□□ -1.45
UBR1-201ENST00000290650 UGGT2Q9NYU1 1516 aa5.97□□□□□ -1.45
UBR1-201ENST00000290650 PBRM1Q86U86 1689 aa5.96□□□□□ -1.45
UBR1-201ENST00000290650 KIAA1211Q6ZU35 1233 aa5.96□□□□□ -1.45
UBR1-201ENST00000290650 NSD3Q9BZ95 1437 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 GPATCH8Q9UKJ3 1502 aaKnown RBP5.96□□□□□ -1.46
UBR1-201ENST00000290650 CALD1Q05682 793 aaKnown RBP5.96□□□□□ -1.46
UBR1-201ENST00000290650 CCDC141Q6ZP82 1450 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 FOSBP53539 338 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 PSME1Q06323 249 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 FKBP5Q13451 457 aaPredicted RBP5.96□□□□□ -1.46
UBR1-201ENST00000290650 BCL11BQ9C0K0 894 aaPredicted RBP5.96□□□□□ -1.46
UBR1-201ENST00000290650 USP35Q9P2H5 1018 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 TSPYL4Q9UJ04 414 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 PDZRN3Q9UPQ7 1066 aa5.96□□□□□ -1.46
UBR1-201ENST00000290650 CHMP4BQ9H444 224 aaKnown RBP5.96□□□□□ -1.46
UBR1-201ENST00000290650 RPRD2Q5VT52 1461 aaKnown RBP5.95□□□□□ -1.46
UBR1-201ENST00000290650 MAP4K4O95819 1239 aaPredicted RBP5.95□□□□□ -1.46
UBR1-201ENST00000290650 NUP153P49790 1475 aaKnown RBP5.95□□□□□ -1.46
UBR1-201ENST00000290650 KDM6BO15054 1643 aa5.95□□□□□ -1.46
UBR1-201ENST00000290650 FRAT2O75474 233 aaPredicted RBP5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms