RNA–Protein interactions for RNA: ENST00000290158.8

KPNB1-201, Transcript of karyopherin subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNB1, Length 6,139 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-201ENST00000290158 TTC5Q8N0Z6 440 aa12.49□□□□□ -0.41
KPNB1-201ENST00000290158 TOMM22Q9NS69 142 aa12.49□□□□□ -0.41
KPNB1-201ENST00000290158 VPS53Q5VIR6 699 aa12.48□□□□□ -0.41
KPNB1-201ENST00000290158 EVC2Q86UK5 1308 aa12.47□□□□□ -0.41
KPNB1-201ENST00000290158 RAD21O60216 631 aa12.47□□□□□ -0.41
KPNB1-201ENST00000290158 EIF2S2P20042 333 aaKnown RBP12.47□□□□□ -0.41
KPNB1-201ENST00000290158 PPP1R1BQ9UD71 204 aaPredicted RBP12.47□□□□□ -0.41
KPNB1-201ENST00000290158 BRPF3Q9ULD4 1205 aa12.47□□□□□ -0.41
KPNB1-201ENST00000290158 RRP9O43818 475 aaKnown RBP12.47□□□□□ -0.41
KPNB1-201ENST00000290158 NFKBIBQ15653 356 aa12.47□□□□□ -0.41
KPNB1-201ENST00000290158 CENPQQ7L2Z9 268 aaPredicted RBP12.47□□□□□ -0.41
KPNB1-201ENST00000290158 GPATCH3Q96I76 525 aa12.46□□□□□ -0.41
KPNB1-201ENST00000290158 ELL2O00472 640 aaPredicted RBP12.46□□□□□ -0.41
KPNB1-201ENST00000290158 PDE3BQ13370 1112 aa12.46□□□□□ -0.41
KPNB1-201ENST00000290158 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.45□□□□□ -0.423e-6■□□□□ 8.2
KPNB1-201ENST00000290158 R3HCC1Q9Y3T6 440 aaKnown RBP12.45□□□□□ -0.42
KPNB1-201ENST00000290158 DCAF8L1A6NGE4 600 aa12.45□□□□□ -0.42
KPNB1-201ENST00000290158 PLIN1O60240 522 aa12.45□□□□□ -0.42
KPNB1-201ENST00000290158 RALBP1Q15311 655 aa12.45□□□□□ -0.42
KPNB1-201ENST00000290158 MRE11P49959 708 aa12.45□□□□□ -0.42
KPNB1-201ENST00000290158 KIF16BQ96L93 1317 aa12.45□□□□□ -0.42
KPNB1-201ENST00000290158 RASSF8Q8NHQ8 419 aa12.44□□□□□ -0.42
KPNB1-201ENST00000290158 PRG4Q92954 1404 aaPredicted RBP12.44□□□□□ -0.42
KPNB1-201ENST00000290158 ST18O60284 1047 aa12.44□□□□□ -0.42
KPNB1-201ENST00000290158 TEFQ10587 303 aa12.44□□□□□ -0.42
KPNB1-201ENST00000290158 MRC2Q9UBG0 1479 aa12.44□□□□□ -0.42
KPNB1-201ENST00000290158 CCAR2Q8N163 923 aaKnown RBP12.44□□□□□ -0.42
KPNB1-201ENST00000290158 LMOD3Q0VAK6 560 aa12.44□□□□□ -0.42
KPNB1-201ENST00000290158 WWC1Q8IX03 1113 aa12.43□□□□□ -0.42
KPNB1-201ENST00000290158 PANK3Q9H999 370 aa12.43□□□□□ -0.42
KPNB1-201ENST00000290158 ZNF644Q9H582 1327 aaPredicted RBP12.43□□□□□ -0.42
KPNB1-201ENST00000290158 TPM3P06753 285 aa12.43□□□□□ -0.42
KPNB1-201ENST00000290158 UBE2Q2Q8WVN8 375 aa12.43□□□□□ -0.42
KPNB1-201ENST00000290158 PES1O00541 588 aaKnown RBP12.43□□□□□ -0.42
KPNB1-201ENST00000290158 ESCO1Q5FWF5 840 aa12.43□□□□□ -0.42
KPNB1-201ENST00000290158 ZNF592Q92610 1267 aa12.43□□□□□ -0.42
KPNB1-201ENST00000290158 STRN4Q9NRL3 753 aa12.42□□□□□ -0.42
KPNB1-201ENST00000290158 CHMP5Q9NZZ3 219 aa12.42□□□□□ -0.42
KPNB1-201ENST00000290158 PROSER2Q86WR7 435 aaPredicted RBP12.42□□□□□ -0.42
KPNB1-201ENST00000290158 TRIM34Q9BYJ4 488 aa12.42□□□□□ -0.42
KPNB1-201ENST00000290158 CWC15Q9P013 229 aaKnown RBP12.41□□□□□ -0.42
KPNB1-201ENST00000290158 ST20-MTHFSA0A0A6YYL1 179 aa12.41□□□□□ -0.42
KPNB1-201ENST00000290158 DIAPH3Q9NSV4 1193 aa12.4□□□□□ -0.42
KPNB1-201ENST00000290158 NLRP2Q9NX02 1062 aa12.4□□□□□ -0.42
KPNB1-201ENST00000290158 BCL2L13Q9BXK5 485 aa12.4□□□□□ -0.42
KPNB1-201ENST00000290158 CGNL1Q0VF96 1302 aa12.4□□□□□ -0.42
KPNB1-201ENST00000290158 SF3B2Q13435 895 aaKnown RBP12.4□□□□□ -0.42
KPNB1-201ENST00000290158 CHMP4AQ9BY43 222 aa12.4□□□□□ -0.43
KPNB1-201ENST00000290158 GRIN2BQ13224 1484 aa12.39□□□□□ -0.43
KPNB1-201ENST00000290158 TXNDC2Q86VQ3 553 aa12.39□□□□□ -0.43
KPNB1-201ENST00000290158 ARGLU1Q9NWB6 273 aaPredicted RBP12.39□□□□□ -0.43
KPNB1-201ENST00000290158 GOLGA6L19H0YKK7 550 aa12.39□□□□□ -0.43
KPNB1-201ENST00000290158 CCDC39Q9UFE4 941 aa12.39□□□□□ -0.43
KPNB1-201ENST00000290158 CCDC34Q96HJ3 373 aa12.38□□□□□ -0.43
KPNB1-201ENST00000290158 TMEM132EQ6IEE7 984 aa12.38□□□□□ -0.43
KPNB1-201ENST00000290158 SAMD1Q6SPF0 538 aaPredicted RBP12.38□□□□□ -0.43
KPNB1-201ENST00000290158 AFAP1Q8N556 730 aa12.38□□□□□ -0.43
KPNB1-201ENST00000290158 RILPL2Q969X0 211 aa12.38□□□□□ -0.43
KPNB1-201ENST00000290158 CABP2Q9NPB3 220 aa12.38□□□□□ -0.43
KPNB1-201ENST00000290158 CWC22Q9HCG8 908 aaKnown RBP12.38□□□□□ -0.43
KPNB1-201ENST00000290158 SNAPC4Q5SXM2 1469 aa12.37□□□□□ -0.43
KPNB1-201ENST00000290158 RRP1P56182 461 aaKnown RBP12.37□□□□□ -0.43
KPNB1-201ENST00000290158 EXOC6Q8TAG9 804 aa12.37□□□□□ -0.43
KPNB1-201ENST00000290158 CTDP1Q9Y5B0 961 aaPredicted RBP12.37□□□□□ -0.43
KPNB1-201ENST00000290158 FAM177BA6PVY3 158 aa12.37□□□□□ -0.43
KPNB1-201ENST00000290158 VPS37DQ86XT2 251 aa12.37□□□□□ -0.43
KPNB1-201ENST00000290158 RBM10P98175 930 aaKnown RBP12.37□□□□□ -0.43
KPNB1-201ENST00000290158 ZBED9Q6R2W3 1325 aa12.37□□□□□ -0.43
KPNB1-201ENST00000290158 HMMRO75330 724 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 ATP6V1DQ9Y5K8 247 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 CCDC70Q6NSX1 233 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 NOL10Q9BSC4 688 aaKnown RBP12.36□□□□□ -0.43
KPNB1-201ENST00000290158 MARCH6O60337 910 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 KIF15Q9NS87 1388 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 FOSBP53539 338 aa12.36□□□□□ -0.43
KPNB1-201ENST00000290158 NASPP49321 788 aaPredicted RBP12.35□□□□□ -0.43
KPNB1-201ENST00000290158 TAF3Q5VWG9 929 aa12.35□□□□□ -0.43
KPNB1-201ENST00000290158 CENPJQ9HC77 1338 aaPredicted RBP12.35□□□□□ -0.43
KPNB1-201ENST00000290158 BECN2A8MW95 431 aa12.35□□□□□ -0.43
KPNB1-201ENST00000290158 HMOX1P09601 288 aa12.35□□□□□ -0.43
KPNB1-201ENST00000290158 IGF1RP08069 1367 aa12.35□□□□□ -0.43
KPNB1-201ENST00000290158 HDAC5Q9UQL6 1122 aa12.34□□□□□ -0.43
KPNB1-201ENST00000290158 SYNJ2O15056 1496 aa12.34□□□□□ -0.43
KPNB1-201ENST00000290158 DHX57Q6P158 1386 aaKnown RBP12.34□□□□□ -0.43
KPNB1-201ENST00000290158 HMGN5P82970 282 aaKnown RBP12.34□□□□□ -0.43
KPNB1-201ENST00000290158 ABTB2Q8N961 1025 aa12.34□□□□□ -0.43
KPNB1-201ENST00000290158 RBM33Q96EV2 1170 aaKnown RBP12.34□□□□□ -0.43
KPNB1-201ENST00000290158 H3BQV1 296 aa12.33□□□□□ -0.44
KPNB1-201ENST00000290158 IFFO2Q5TF58 517 aa12.33□□□□□ -0.44
KPNB1-201ENST00000290158 AIMP1Q12904 312 aaKnown RBP12.33□□□□□ -0.44
KPNB1-201ENST00000290158 SF3A1Q15459 793 aaKnown RBP12.33□□□□□ -0.44
KPNB1-201ENST00000290158 TPD52L1Q16890 204 aaPredicted RBP12.33□□□□□ -0.44
KPNB1-201ENST00000290158 NEXNQ0ZGT2 675 aa12.33□□□□□ -0.44
KPNB1-201ENST00000290158 ACBD3Q9H3P7 528 aa12.33□□□□□ -0.44
KPNB1-201ENST00000290158 C9orf78Q9NZ63 289 aaPredicted RBP12.33□□□□□ -0.44
KPNB1-201ENST00000290158 RBM42Q9BTD8 480 aaKnown RBP12.33□□□□□ -0.44
KPNB1-201ENST00000290158 ANKRD45Q5TZF3 282 aa12.32□□□□□ -0.44
KPNB1-201ENST00000290158 CRBNQ96SW2 442 aa12.32□□□□□ -0.44
KPNB1-201ENST00000290158 IFT140Q96RY7 1462 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms