RNA–Protein interactions for RNA: ENST00000289957.2

CHRNB3-201, Transcript of cholinergic receptor nicotinic beta 3 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB3, Length 2,294 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB3-201ENST00000289957 A2ML1A8K2U0 1454 aa16.26■□□□□ 0.19
CHRNB3-201ENST00000289957 PRAG1Q86YV5 1406 aa16.26■□□□□ 0.19
CHRNB3-201ENST00000289957 IFT172Q9UG01 1749 aa16.25■□□□□ 0.19
CHRNB3-201ENST00000289957 NEXMIFQ5QGS0 1516 aa16.25■□□□□ 0.19
CHRNB3-201ENST00000289957 PPLO60437 1756 aa16.24■□□□□ 0.19
CHRNB3-201ENST00000289957 MYO3AQ8NEV4 1616 aa16.23■□□□□ 0.19
CHRNB3-201ENST00000289957 UHRF1BP1Q6BDS2 1440 aa16.23■□□□□ 0.19
CHRNB3-201ENST00000289957 UBR1Q8IWV7 1749 aa16.23■□□□□ 0.19
CHRNB3-201ENST00000289957 CFAP70Q5T0N1 1121 aa16.21■□□□□ 0.19
CHRNB3-201ENST00000289957 NEURL4Q96JN8 1562 aa16.21■□□□□ 0.18
CHRNB3-201ENST00000289957 TRPM1Q7Z4N2 1603 aa16.2■□□□□ 0.18
CHRNB3-201ENST00000289957 LTKP29376 864 aa16.19■□□□□ 0.18
CHRNB3-201ENST00000289957 RIMS2Q9UQ26 1411 aa16.18■□□□□ 0.18
CHRNB3-201ENST00000289957 NLRP1Q9C000 1473 aa16.18■□□□□ 0.18
CHRNB3-201ENST00000289957 ZFYVE9O95405 1425 aa16.17■□□□□ 0.18
CHRNB3-201ENST00000289957 MYOM2P54296 1465 aa16.17■□□□□ 0.18
CHRNB3-201ENST00000289957 CEP170BQ9Y4F5 1589 aaPredicted RBP16.17■□□□□ 0.18
CHRNB3-201ENST00000289957 TMEM132EQ6IEE7 984 aa16.17■□□□□ 0.18
CHRNB3-201ENST00000289957 ROCK2O75116 1388 aaKnown RBP16.17■□□□□ 0.18
CHRNB3-201ENST00000289957 RALGAPBQ86X10 1494 aa16.17■□□□□ 0.18
CHRNB3-201ENST00000289957 PIK3C2GO75747 1445 aa16.16■□□□□ 0.18
CHRNB3-201ENST00000289957 NRXN1Q9ULB1 1477 aa16.16■□□□□ 0.18
CHRNB3-201ENST00000289957 HSPA5P11021 654 aaKnown RBP16.15■□□□□ 0.18
CHRNB3-201ENST00000289957 TMEM2Q9UHN6 1383 aa16.15■□□□□ 0.18
CHRNB3-201ENST00000289957 CARD11Q9BXL7 1154 aa16.15■□□□□ 0.18
CHRNB3-201ENST00000289957 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
CHRNB3-201ENST00000289957 SETD1BQ9UPS6 1966 aaKnown RBP16.12■□□□□ 0.17
CHRNB3-201ENST00000289957 VGFO15240 615 aaPredicted RBP16.12■□□□□ 0.17
CHRNB3-201ENST00000289957 HSPA2P54652 639 aa16.11■□□□□ 0.17
CHRNB3-201ENST00000289957 TXNDC2Q86VQ3 553 aa16.11■□□□□ 0.17
CHRNB3-201ENST00000289957 USP47Q96K76 1375 aa16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 NRXN3Q9Y4C0 1643 aa16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 YTHDC1Q96MU7 727 aaKnown RBP16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 C11orf95C9JLR9 678 aaPredicted RBP16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 ZNF142P52746 1687 aaPredicted RBP16.1■□□□□ 0.17
CHRNB3-201ENST00000289957 IQGAP1P46940 1657 aa16.09■□□□□ 0.17
CHRNB3-201ENST00000289957 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
CHRNB3-201ENST00000289957 SLC26A8Q96RN1 970 aa16.08■□□□□ 0.17
CHRNB3-201ENST00000289957 ST20-MTHFSA0A0A6YYL1 179 aa16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 EIF4G2P78344 907 aaKnown RBP eCLIP16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 THEMISQ8N1K5 641 aaPredicted RBP16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 BCANQ96GW7 911 aa16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 GPRASP1Q5JY77 1395 aa16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 ARHGAP23Q9P227 1491 aa16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 ADGRB1O14514 1584 aa16.08■□□□□ 0.16
CHRNB3-201ENST00000289957 SLIT1O75093 1534 aa16.07■□□□□ 0.16
CHRNB3-201ENST00000289957 STK26Q9P289 416 aa16.07■□□□□ 0.16
CHRNB3-201ENST00000289957 ALKQ9UM73 1620 aa16.07■□□□□ 0.16
CHRNB3-201ENST00000289957 TRAK1Q9UPV9 953 aa16.06■□□□□ 0.16
CHRNB3-201ENST00000289957 METP08581 1390 aa16.06■□□□□ 0.16
CHRNB3-201ENST00000289957 SETD1AO15047 1707 aaKnown RBP16.05■□□□□ 0.16
CHRNB3-201ENST00000289957 NCKAP5LQ9HCH0 1330 aa16.05■□□□□ 0.16
CHRNB3-201ENST00000289957 STAC3Q96MF2 364 aa16.04■□□□□ 0.16
CHRNB3-201ENST00000289957 ADAMTS13Q76LX8 1427 aa16.04■□□□□ 0.16
CHRNB3-201ENST00000289957 KIAA1210Q9ULL0 1709 aa16.04■□□□□ 0.16
CHRNB3-201ENST00000289957 SCAF11Q99590 1463 aaKnown RBP16.03■□□□□ 0.16
CHRNB3-201ENST00000289957 LMTK3Q96Q04 1460 aa16.03■□□□□ 0.16
CHRNB3-201ENST00000289957 SAFB2Q14151 953 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHRNB3-201ENST00000289957 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.02■□□□□ 0.16
CHRNB3-201ENST00000289957 EID1Q9Y6B2 187 aa16.02■□□□□ 0.16
CHRNB3-201ENST00000289957 PLEKHG1Q9ULL1 1385 aa16.01■□□□□ 0.15
CHRNB3-201ENST00000289957 SETBP1Q9Y6X0 1596 aa16.01■□□□□ 0.15
CHRNB3-201ENST00000289957 WASHC2AQ641Q2 1341 aa16■□□□□ 0.15
CHRNB3-201ENST00000289957 LAMC1P11047 1609 aa15.99■□□□□ 0.15
CHRNB3-201ENST00000289957 MYT1Q01538 1121 aa15.99■□□□□ 0.15
CHRNB3-201ENST00000289957 ANKLE2Q86XL3 938 aa15.99■□□□□ 0.15
CHRNB3-201ENST00000289957 TESK2Q96S53 571 aa15.99■□□□□ 0.15
CHRNB3-201ENST00000289957 POLR3GLQ9BT43 218 aa15.98■□□□□ 0.15
CHRNB3-201ENST00000289957 PTPRUQ92729 1446 aa15.98■□□□□ 0.15
CHRNB3-201ENST00000289957 YTHDC2Q9H6S0 1430 aaKnown RBP15.98■□□□□ 0.15
CHRNB3-201ENST00000289957 WAPLQ7Z5K2 1190 aa15.97■□□□□ 0.15
CHRNB3-201ENST00000289957 DISP3Q9P2K9 1392 aa15.97■□□□□ 0.15
CHRNB3-201ENST00000289957 PLEKHH1Q9ULM0 1364 aa15.97■□□□□ 0.15
CHRNB3-201ENST00000289957 MED14O60244 1454 aa15.97■□□□□ 0.15
CHRNB3-201ENST00000289957 HDGFP51858 240 aaKnown RBP15.96■□□□□ 0.15
CHRNB3-201ENST00000289957 ARHGEF28Q8N1W1 1705 aaKnown RBP15.96■□□□□ 0.15
CHRNB3-201ENST00000289957 RBM33Q96EV2 1170 aaKnown RBP15.96■□□□□ 0.14
CHRNB3-201ENST00000289957 KIF7Q2M1P5 1343 aa15.95■□□□□ 0.14
CHRNB3-201ENST00000289957 DDX10Q13206 875 aaKnown RBP15.94■□□□□ 0.14
CHRNB3-201ENST00000289957 PRAM1Q96QH2 718 aa15.94■□□□□ 0.14
CHRNB3-201ENST00000289957 POLR1AO95602 1720 aaPredicted RBP15.94■□□□□ 0.14
CHRNB3-201ENST00000289957 NPHP4O75161 1426 aaPredicted RBP15.93■□□□□ 0.14
CHRNB3-201ENST00000289957 ROBO2Q9HCK4 1378 aa15.92■□□□□ 0.14
CHRNB3-201ENST00000289957 STRCQ7RTU9 1775 aa15.92■□□□□ 0.14
CHRNB3-201ENST00000289957 CENPJQ9HC77 1338 aaPredicted RBP15.91■□□□□ 0.14
CHRNB3-201ENST00000289957 QRICH2Q9H0J4 1663 aa15.91■□□□□ 0.14
CHRNB3-201ENST00000289957 LRPPRCP42704 1394 aaKnown RBP15.91■□□□□ 0.14
CHRNB3-201ENST00000289957 CCDC7Q96M83 1385 aa15.91■□□□□ 0.14
CHRNB3-201ENST00000289957 MINK1Q8N4C8 1332 aaPredicted RBP15.9■□□□□ 0.14
CHRNB3-201ENST00000289957 AMOTL2Q9Y2J4 779 aa15.9■□□□□ 0.14
CHRNB3-201ENST00000289957 TBX22Q9Y458 520 aa15.9■□□□□ 0.14
CHRNB3-201ENST00000289957 KCNA6P17658 529 aa15.89■□□□□ 0.13
CHRNB3-201ENST00000289957 EIF3AQ14152 1382 aaKnown RBP15.88■□□□□ 0.13
CHRNB3-201ENST00000289957 POGKQ9P215 609 aa15.87■□□□□ 0.13
CHRNB3-201ENST00000289957 ABCC11Q96J66 1382 aa15.87■□□□□ 0.13
CHRNB3-201ENST00000289957 TULP4Q9NRJ4 1543 aa15.86■□□□□ 0.13
CHRNB3-201ENST00000289957 SUPT16HQ9Y5B9 1047 aaKnown RBP15.84■□□□□ 0.13
CHRNB3-201ENST00000289957 DIP2AQ14689 1571 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms