RNA–Protein interactions for RNA: ENST00000289577.9

TMED4-201, Transcript of transmembrane p24 trafficking protein 4, humanhuman

TSL 2 BASIC

Gene TMED4, Length 2,203 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-201ENST00000289577 ASXL1Q8IXJ9 1541 aa26.62■■□□□ 1.85
TMED4-201ENST00000289577 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.62■■□□□ 1.85
TMED4-201ENST00000289577 NPC1L1Q9UHC9 1359 aa26.62■■□□□ 1.85
TMED4-201ENST00000289577 FAM161AQ3B820 660 aa26.61■■□□□ 1.85
TMED4-201ENST00000289577 TRMT2AQ8IZ69 625 aaKnown RBP26.61■■□□□ 1.85
TMED4-201ENST00000289577 SLFN5Q08AF3 891 aa26.61■■□□□ 1.85
TMED4-201ENST00000289577 CDCA8Q53HL2 280 aa26.61■■□□□ 1.85
TMED4-201ENST00000289577 SCAPERQ9BY12 1400 aa26.6■■□□□ 1.85
TMED4-201ENST00000289577 C8orf34Q49A92 452 aa26.59■■□□□ 1.85
TMED4-201ENST00000289577 SCAF11Q99590 1463 aaKnown RBP26.59■■□□□ 1.85
TMED4-201ENST00000289577 SPHKAPQ2M3C7 1700 aa26.59■■□□□ 1.85
TMED4-201ENST00000289577 IL27Q8NEV9 243 aa26.59■■□□□ 1.85
TMED4-201ENST00000289577 MYOM1P52179 1685 aa26.57■■□□□ 1.84
TMED4-201ENST00000289577 STAC3Q96MF2 364 aa26.57■■□□□ 1.84
TMED4-201ENST00000289577 ABCC2Q92887 1545 aa26.57■■□□□ 1.84
TMED4-201ENST00000289577 TRPM2O94759 1503 aa26.56■■□□□ 1.84
TMED4-201ENST00000289577 CEP152O94986 1710 aa26.54■■□□□ 1.84
TMED4-201ENST00000289577 NFKBIBQ15653 356 aa26.54■■□□□ 1.84
TMED4-201ENST00000289577 EIF3AQ14152 1382 aaKnown RBP26.54■■□□□ 1.84
TMED4-201ENST00000289577 SHROOM2Q13796 1616 aa26.54■■□□□ 1.84
TMED4-201ENST00000289577 PLCH2O75038 1416 aa26.53■■□□□ 1.84
TMED4-201ENST00000289577 PTPRTO14522 1441 aa26.52■■□□□ 1.84
TMED4-201ENST00000289577 NKTRP30414 1462 aaKnown RBP26.51■■□□□ 1.83
TMED4-201ENST00000289577 GSE1Q14687 1217 aa26.5■■□□□ 1.83
TMED4-201ENST00000289577 ABCC1P33527 1531 aa26.5■■□□□ 1.83
TMED4-201ENST00000289577 SLC4A3P48751 1232 aa26.49■■□□□ 1.83
TMED4-201ENST00000289577 DAXXQ9UER7 740 aaPredicted RBP26.48■■□□□ 1.83
TMED4-201ENST00000289577 KIAA1210Q9ULL0 1709 aa26.48■■□□□ 1.83
TMED4-201ENST00000289577 CLTCL1P53675 1640 aa26.47■■□□□ 1.83
TMED4-201ENST00000289577 KDM5AP29375 1690 aaKnown RBP26.46■■□□□ 1.83
TMED4-201ENST00000289577 SPINK5Q9NQ38 1064 aaPredicted RBP26.46■■□□□ 1.83
TMED4-201ENST00000289577 EFCAB2Q5VUJ9 269 aa26.46■■□□□ 1.83
TMED4-201ENST00000289577 TRAPPC8Q9Y2L5 1435 aa26.46■■□□□ 1.83
TMED4-201ENST00000289577 CCDC146Q8IYE0 955 aa26.44■■□□□ 1.82
TMED4-201ENST00000289577 APAF1O14727 1248 aa26.43■■□□□ 1.82
TMED4-201ENST00000289577 NGEFQ8N5V2 710 aa26.43■■□□□ 1.82
TMED4-201ENST00000289577 CHD1O14646 1710 aa26.43■■□□□ 1.82
TMED4-201ENST00000289577 E9PSI1 815 aa26.43■■□□□ 1.82
TMED4-201ENST00000289577 DEPDC5O75140 1603 aa26.42■■□□□ 1.82
TMED4-201ENST00000289577 RTEL1-TNFRSF6BF6WH68 1400 aa26.42■■□□□ 1.82
TMED4-201ENST00000289577 NEURL4Q96JN8 1562 aa26.41■■□□□ 1.82
TMED4-201ENST00000289577 RGS3P49796 1198 aa26.41■■□□□ 1.82
TMED4-201ENST00000289577 VIRMAQ69YN4 1812 aaKnown RBP26.4■■□□□ 1.82
TMED4-201ENST00000289577 BCAR3O75815 825 aa26.39■■□□□ 1.82
TMED4-201ENST00000289577 TET3O43151 1660 aa26.39■■□□□ 1.82
TMED4-201ENST00000289577 SLC24A1O60721 1099 aa26.38■■□□□ 1.81
TMED4-201ENST00000289577 ERCC6L2Q5T890 1561 aa26.38■■□□□ 1.81
TMED4-201ENST00000289577 ZFYVE16Q7Z3T8 1539 aa26.37■■□□□ 1.81
TMED4-201ENST00000289577 ERVK-7P63135 1459 aa26.36■■□□□ 1.81
TMED4-201ENST00000289577 PDE3AQ14432 1141 aa26.36■■□□□ 1.81
TMED4-201ENST00000289577 FRAT1Q92837 279 aaPredicted RBP26.36■■□□□ 1.81
TMED4-201ENST00000289577 NINLQ9Y2I6 1382 aa26.36■■□□□ 1.81
TMED4-201ENST00000289577 RTN4Q9NQC3 1192 aaKnown RBP26.35■■□□□ 1.81
TMED4-201ENST00000289577 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
TMED4-201ENST00000289577 CGNL1Q0VF96 1302 aa26.35■■□□□ 1.81
TMED4-201ENST00000289577 VWDEQ8N2E2 1590 aa26.34■■□□□ 1.81
TMED4-201ENST00000289577 ZCCHC11Q5TAX3 1644 aaKnown RBP26.34■■□□□ 1.81
TMED4-201ENST00000289577 IGHDP01880 384 aa26.34■■□□□ 1.81
TMED4-201ENST00000289577 DMRT2Q9Y5R5 561 aa26.34■■□□□ 1.81
TMED4-201ENST00000289577 ANO8Q9HCE9 1232 aaPredicted RBP26.33■■□□□ 1.81
TMED4-201ENST00000289577 USP19O94966 1318 aa26.32■■□□□ 1.8
TMED4-201ENST00000289577 CARD14Q9BXL6 1004 aa26.32■■□□□ 1.8
TMED4-201ENST00000289577 MYOM2P54296 1465 aa26.32■■□□□ 1.8
TMED4-201ENST00000289577 BRPF3Q9ULD4 1205 aa26.31■■□□□ 1.8
TMED4-201ENST00000289577 ARAP3Q8WWN8 1544 aa26.31■■□□□ 1.8
TMED4-201ENST00000289577 MAP3K4Q9Y6R4 1608 aa26.31■■□□□ 1.8
TMED4-201ENST00000289577 POLR3AO14802 1390 aaPredicted RBP26.3■■□□□ 1.8
TMED4-201ENST00000289577 FRAT2O75474 233 aaPredicted RBP26.29■■□□□ 1.8
TMED4-201ENST00000289577 ABCA6Q8N139 1617 aa26.29■■□□□ 1.8
TMED4-201ENST00000289577 UHRF1BP1LA0JNW5 1464 aa26.29■■□□□ 1.8
TMED4-201ENST00000289577 MAPK8IP3Q9UPT6 1336 aa26.28■■□□□ 1.8
TMED4-201ENST00000289577 CENPJQ9HC77 1338 aaPredicted RBP26.27■■□□□ 1.8
TMED4-201ENST00000289577 CLUAP1Q96AJ1 413 aa26.27■■□□□ 1.8
TMED4-201ENST00000289577 WWC1Q8IX03 1113 aa26.26■■□□□ 1.79
TMED4-201ENST00000289577 AFAP1Q8N556 730 aa26.26■■□□□ 1.79
TMED4-201ENST00000289577 MYO3AQ8NEV4 1616 aa26.26■■□□□ 1.79
TMED4-201ENST00000289577 CFAP70Q5T0N1 1121 aa26.25■■□□□ 1.79
TMED4-201ENST00000289577 KANK1Q14678 1352 aa26.25■■□□□ 1.79
TMED4-201ENST00000289577 SBNO2Q9Y2G9 1366 aa26.24■■□□□ 1.79
TMED4-201ENST00000289577 IFT172Q9UG01 1749 aa26.22■■□□□ 1.79
TMED4-201ENST00000289577 SHPRHQ149N8 1683 aa26.22■■□□□ 1.79
TMED4-201ENST00000289577 INO80Q9ULG1 1556 aaPredicted RBP26.22■■□□□ 1.79
TMED4-201ENST00000289577 PANK1Q8TE04 598 aa26.21■■□□□ 1.79
TMED4-201ENST00000289577 AAMPQ13685 434 aa26.2■■□□□ 1.79
TMED4-201ENST00000289577 COG6Q9Y2V7 657 aa26.2■■□□□ 1.79
TMED4-201ENST00000289577 NLRP1Q9C000 1473 aa26.2■■□□□ 1.79
TMED4-201ENST00000289577 NRXN1Q9ULB1 1477 aa26.2■■□□□ 1.79
TMED4-201ENST00000289577 ADGRF5Q8IZF2 1346 aa26.2■■□□□ 1.79
TMED4-201ENST00000289577 ATP7AQ04656 1500 aa26.2■■□□□ 1.78
TMED4-201ENST00000289577 SEC24BO95487 1268 aa26.18■■□□□ 1.78
TMED4-201ENST00000289577 ZMYM3Q14202 1370 aa26.18■■□□□ 1.78
TMED4-201ENST00000289577 KIF1BO60333 1816 aa26.18■■□□□ 1.78
TMED4-201ENST00000289577 MROH1Q8NDA8 1641 aa26.18■■□□□ 1.78
TMED4-201ENST00000289577 PHF23Q9BUL5 403 aaPredicted RBP26.18■■□□□ 1.78
TMED4-201ENST00000289577 IQSEC2Q5JU85 1478 aa26.17■■□□□ 1.78
TMED4-201ENST00000289577 UGGT1Q9NYU2 1555 aa26.17■■□□□ 1.78
TMED4-201ENST00000289577 CANXP27824 592 aaKnown RBP26.16■■□□□ 1.78
TMED4-201ENST00000289577 RARSP54136 660 aaKnown RBP26.15■■□□□ 1.78
TMED4-201ENST00000289577 BECN1Q14457 450 aa26.14■■□□□ 1.78
TMED4-201ENST00000289577 PMFBP1Q8TBY8 1022 aa26.14■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms