RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 MAP3K4Q9Y6R4 1608 aa26.18■■□□□ 1.78
BRAF-201ENST00000288602 SCAF11Q99590 1463 aaKnown RBP26.18■■□□□ 1.78
BRAF-201ENST00000288602 FAM69CQ0P6D2 419 aa26.17■■□□□ 1.78
BRAF-201ENST00000288602 KTN1Q86UP2 1357 aaKnown RBP26.17■■□□□ 1.78
BRAF-201ENST00000288602 YEATS2Q9ULM3 1422 aa26.16■■□□□ 1.78
BRAF-201ENST00000288602 DIP2CQ9Y2E4 1556 aa26.15■■□□□ 1.78
BRAF-201ENST00000288602 RICTORQ6R327 1708 aa26.15■■□□□ 1.78
BRAF-201ENST00000288602 ABCC3O15438 1527 aa26.14■■□□□ 1.78
BRAF-201ENST00000288602 PARD3Q8TEW0 1356 aa26.13■■□□□ 1.77
BRAF-201ENST00000288602 NEURL4Q96JN8 1562 aa26.13■■□□□ 1.77
BRAF-201ENST00000288602 BRD4O60885 1362 aaPredicted RBP26.12■■□□□ 1.77
BRAF-201ENST00000288602 NOS1P29475 1434 aa26.12■■□□□ 1.77
BRAF-201ENST00000288602 MYOM2P54296 1465 aa26.11■■□□□ 1.77
BRAF-201ENST00000288602 IFT172Q9UG01 1749 aa26.1■■□□□ 1.77
BRAF-201ENST00000288602 ADGRB3O60242 1522 aa26.08■■□□□ 1.77
BRAF-201ENST00000288602 NUTM2DQ5VT03 806 aaPredicted RBP26.08■■□□□ 1.77
BRAF-201ENST00000288602 NLRP13Q86W25 1043 aa26.08■■□□□ 1.77
BRAF-201ENST00000288602 KIAA1210Q9ULL0 1709 aa26.07■■□□□ 1.76
BRAF-201ENST00000288602 SIGLEC1Q9BZZ2 1709 aa26.07■■□□□ 1.76
BRAF-201ENST00000288602 CAMSAP1Q5T5Y3 1602 aa26.07■■□□□ 1.76
BRAF-201ENST00000288602 TSPOAP1O95153 1857 aa26.07■■□□□ 1.76
BRAF-201ENST00000288602 EIF3AQ14152 1382 aaKnown RBP26.06■■□□□ 1.76
BRAF-201ENST00000288602 GLI2P10070 1586 aa26.05■■□□□ 1.76
BRAF-201ENST00000288602 LRPPRCP42704 1394 aaKnown RBP26.04■■□□□ 1.76
BRAF-201ENST00000288602 SENP3Q9H4L4 574 aaPredicted RBP26.03■■□□□ 1.76
BRAF-201ENST00000288602 NRXN1Q9ULB1 1477 aa26.02■■□□□ 1.76
BRAF-201ENST00000288602 DIP2BQ9P265 1576 aa26.01■■□□□ 1.75
BRAF-201ENST00000288602 CDCA8Q53HL2 280 aa26.01■■□□□ 1.75
BRAF-201ENST00000288602 TMEM132EQ6IEE7 984 aa26■■□□□ 1.75
BRAF-201ENST00000288602 KNSTRNQ9Y448 316 aa26■■□□□ 1.75
BRAF-201ENST00000288602 SALL2Q9Y467 1007 aaPredicted RBP26■■□□□ 1.75
BRAF-201ENST00000288602 TRAK1Q9UPV9 953 aa25.99■■□□□ 1.75
BRAF-201ENST00000288602 PPLO60437 1756 aa25.99■■□□□ 1.75
BRAF-201ENST00000288602 SYNMO15061 1565 aa25.98■■□□□ 1.75
BRAF-201ENST00000288602 PIK3C2GO75747 1445 aa25.96■■□□□ 1.75
BRAF-201ENST00000288602 IDI1Q13907 227 aa25.96■■□□□ 1.75
BRAF-201ENST00000288602 C14orf93Q9H972 538 aaKnown RBP25.95■■□□□ 1.74
BRAF-201ENST00000288602 ERVK-7P63135 1459 aa25.95■■□□□ 1.74
BRAF-201ENST00000288602 MYOM1P52179 1685 aa25.95■■□□□ 1.74
BRAF-201ENST00000288602 AMER1Q5JTC6 1135 aaPredicted RBP25.94■■□□□ 1.74
BRAF-201ENST00000288602 NUDCQ9Y266 331 aa25.94■■□□□ 1.74
BRAF-201ENST00000288602 SMG6Q86US8 1419 aaKnown RBP25.94■■□□□ 1.74
BRAF-201ENST00000288602 TSHZ2Q9NRE2 1034 aa25.93■■□□□ 1.74
BRAF-201ENST00000288602 KDM5AP29375 1690 aaKnown RBP25.92■■□□□ 1.74
BRAF-201ENST00000288602 RPGRIP1LQ68CZ1 1315 aa25.91■■□□□ 1.74
BRAF-201ENST00000288602 PIK3C2BO00750 1634 aa25.91■■□□□ 1.74
BRAF-201ENST00000288602 FBXO31Q5XUX0 539 aaPredicted RBP25.91■■□□□ 1.74
BRAF-201ENST00000288602 CENPJQ9HC77 1338 aaPredicted RBP25.91■■□□□ 1.74
BRAF-201ENST00000288602 ARHGAP31Q2M1Z3 1444 aa25.89■■□□□ 1.74
BRAF-201ENST00000288602 ZC3H13Q5T200 1668 aaKnown RBP25.88■■□□□ 1.73
BRAF-201ENST00000288602 PPP2R1AP30153 589 aa25.88■■□□□ 1.73
BRAF-201ENST00000288602 SETBP1Q9Y6X0 1596 aa25.87■■□□□ 1.73
BRAF-201ENST00000288602 ZMYM4Q5VZL5 1548 aa25.87■■□□□ 1.73
BRAF-201ENST00000288602 ADGRB1O14514 1584 aa25.87■■□□□ 1.73
BRAF-201ENST00000288602 VGFO15240 615 aaPredicted RBP25.86■■□□□ 1.73
BRAF-201ENST00000288602 NEXMIFQ5QGS0 1516 aa25.85■■□□□ 1.73
BRAF-201ENST00000288602 ASXL1Q8IXJ9 1541 aa25.85■■□□□ 1.73
BRAF-201ENST00000288602 CARD14Q9BXL6 1004 aa25.85■■□□□ 1.73
BRAF-201ENST00000288602 MLECQ14165 292 aa25.84■■□□□ 1.73
BRAF-201ENST00000288602 MYO3AQ8NEV4 1616 aa25.84■■□□□ 1.73
BRAF-201ENST00000288602 SLC52A1Q9NWF4 448 aa25.83■■□□□ 1.73
BRAF-201ENST00000288602 MYO5BQ9ULV0 1848 aa25.83■■□□□ 1.72
BRAF-201ENST00000288602 PREX1Q8TCU6 1659 aa25.82■■□□□ 1.72
BRAF-201ENST00000288602 SLC24A1O60721 1099 aa25.82■■□□□ 1.72
BRAF-201ENST00000288602 ADAMTS8Q9UP79 889 aa25.81■■□□□ 1.72
BRAF-201ENST00000288602 SBNO2Q9Y2G9 1366 aa25.8■■□□□ 1.72
BRAF-201ENST00000288602 QRICH2Q9H0J4 1663 aa25.79■■□□□ 1.72
BRAF-201ENST00000288602 SAFB2Q14151 953 aaKnown RBP eCLIP25.79■■□□□ 1.721e-6■■■□□ 18
BRAF-201ENST00000288602 PPP4R2Q9NY27 417 aa25.78■■□□□ 1.72
BRAF-201ENST00000288602 CDCA7LQ96GN5 454 aa25.77■■□□□ 1.72
BRAF-201ENST00000288602 SLC12A5Q9H2X9 1139 aa25.77■■□□□ 1.72
BRAF-201ENST00000288602 STK26Q9P289 416 aa25.77■■□□□ 1.72
BRAF-201ENST00000288602 B4GALNT3Q6L9W6 998 aa25.77■■□□□ 1.72
BRAF-201ENST00000288602 ERICH6BQ5W0A0 696 aa25.76■■□□□ 1.71
BRAF-201ENST00000288602 BLMP54132 1417 aaPredicted RBP25.75■■□□□ 1.71
BRAF-201ENST00000288602 TMEM131LA2VDJ0 1609 aa25.74■■□□□ 1.71
BRAF-201ENST00000288602 WDR43Q15061 677 aaKnown RBP eCLIP25.73■■□□□ 1.71
BRAF-201ENST00000288602 STAG3Q9UJ98 1225 aa25.73■■□□□ 1.71
BRAF-201ENST00000288602 NPC1L1Q9UHC9 1359 aa25.72■■□□□ 1.71
BRAF-201ENST00000288602 KIF13AQ9H1H9 1805 aa25.72■■□□□ 1.71
BRAF-201ENST00000288602 RNF123Q5XPI4 1314 aa25.71■■□□□ 1.71
BRAF-201ENST00000288602 CLTCQ00610 1675 aaKnown RBP25.7■■□□□ 1.71
BRAF-201ENST00000288602 ARHGEF28Q8N1W1 1705 aaKnown RBP25.69■■□□□ 1.7
BRAF-201ENST00000288602 CABP2Q9NPB3 220 aa25.68■■□□□ 1.7
BRAF-201ENST00000288602 NSD3Q9BZ95 1437 aa25.67■■□□□ 1.7
BRAF-201ENST00000288602 TNNT2P45379 298 aaPredicted RBP25.67■■□□□ 1.7
BRAF-201ENST00000288602 ZFYVE9O95405 1425 aa25.66■■□□□ 1.7
BRAF-201ENST00000288602 AGLP35573 1532 aa25.66■■□□□ 1.7
BRAF-201ENST00000288602 REREQ9P2R6 1566 aa25.66■■□□□ 1.7
BRAF-201ENST00000288602 PDE3BQ13370 1112 aa25.65■■□□□ 1.7
BRAF-201ENST00000288602 EVC2Q86UK5 1308 aa25.65■■□□□ 1.7
BRAF-201ENST00000288602 CCDC146Q8IYE0 955 aa25.64■■□□□ 1.7
BRAF-201ENST00000288602 INSRP06213 1382 aa25.64■■□□□ 1.7
BRAF-201ENST00000288602 TULP4Q9NRJ4 1543 aa25.64■■□□□ 1.7
BRAF-201ENST00000288602 RCAN3Q9UKA8 241 aa25.64■■□□□ 1.69
BRAF-201ENST00000288602 PPP6R1Q9UPN7 881 aa25.61■■□□□ 1.69
BRAF-201ENST00000288602 PLEKHH1Q9ULM0 1364 aa25.6■■□□□ 1.69
BRAF-201ENST00000288602 MORC1Q86VD1 984 aa25.6■■□□□ 1.69
BRAF-201ENST00000288602 PRAM1Q96QH2 718 aa25.6■■□□□ 1.69
BRAF-201ENST00000288602 MINK1Q8N4C8 1332 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms