RNA–Protein interactions for RNA: ENST00000286301.7

CSF1R-201, Transcript of colony stimulating factor 1 receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSF1R, Length 3,989 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-201ENST00000286301 A2MP01023 1474 aa12.27□□□□□ -0.45
CSF1R-201ENST00000286301 SPATA31E1Q6ZUB1 1445 aa12.27□□□□□ -0.45
CSF1R-201ENST00000286301 ZBTB47Q9UFB7 747 aaPredicted RBP12.27□□□□□ -0.45
CSF1R-201ENST00000286301 SLC24A1O60721 1099 aa12.27□□□□□ -0.45
CSF1R-201ENST00000286301 CFAP53Q96M91 514 aa12.27□□□□□ -0.45
CSF1R-201ENST00000286301 NOP58Q9Y2X3 529 aaKnown RBP12.27□□□□□ -0.45
CSF1R-201ENST00000286301 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.26□□□□□ -0.45
CSF1R-201ENST00000286301 DAXXQ9UER7 740 aaPredicted RBP12.25□□□□□ -0.45
CSF1R-201ENST00000286301 APAF1O14727 1248 aa12.24□□□□□ -0.45
CSF1R-201ENST00000286301 U2AF1L5P0DN76 240 aaPredicted RBP12.24□□□□□ -0.45
CSF1R-201ENST00000286301 U2AF1Q01081 240 aaKnown RBP eCLIP12.24□□□□□ -0.45
CSF1R-201ENST00000286301 UHRF1BP1LA0JNW5 1464 aa12.24□□□□□ -0.45
CSF1R-201ENST00000286301 PPP2R1AP30153 589 aa12.24□□□□□ -0.45
CSF1R-201ENST00000286301 STAC3Q96MF2 364 aa12.24□□□□□ -0.45
CSF1R-201ENST00000286301 PLA2R1Q13018 1463 aa12.24□□□□□ -0.45
CSF1R-201ENST00000286301 NOS1P29475 1434 aa12.24□□□□□ -0.45
CSF1R-201ENST00000286301 FRAT1Q92837 279 aaPredicted RBP12.23□□□□□ -0.45
CSF1R-201ENST00000286301 BRD4O60885 1362 aaPredicted RBP12.23□□□□□ -0.45
CSF1R-201ENST00000286301 ZNF518AQ6AHZ1 1483 aa12.23□□□□□ -0.45
CSF1R-201ENST00000286301 ATP7AQ04656 1500 aa12.23□□□□□ -0.45
CSF1R-201ENST00000286301 PAK3O75914 559 aaPredicted RBP12.22□□□□□ -0.45
CSF1R-201ENST00000286301 EVC2Q86UK5 1308 aa12.22□□□□□ -0.45
CSF1R-201ENST00000286301 C14orf37Q86TY3 774 aa12.22□□□□□ -0.45
CSF1R-201ENST00000286301 PRAM1Q96QH2 718 aa12.22□□□□□ -0.45
CSF1R-201ENST00000286301 CLASP1Q7Z460 1538 aa12.22□□□□□ -0.45
CSF1R-201ENST00000286301 UHRF1BP1Q6BDS2 1440 aa12.21□□□□□ -0.45
CSF1R-201ENST00000286301 ABCC1P33527 1531 aa12.21□□□□□ -0.45
CSF1R-201ENST00000286301 RTEL1-TNFRSF6BF6WH68 1400 aa12.21□□□□□ -0.45
CSF1R-201ENST00000286301 GGNBP2Q9H3C7 697 aa12.21□□□□□ -0.45
CSF1R-201ENST00000286301 LAS1LQ9Y4W2 734 aaKnown RBP12.21□□□□□ -0.46
CSF1R-201ENST00000286301 FANCIQ9NVI1 1328 aa12.2□□□□□ -0.46
CSF1R-201ENST00000286301 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.2□□□□□ -0.46
CSF1R-201ENST00000286301 EXOC6Q8TAG9 804 aa12.2□□□□□ -0.46
CSF1R-201ENST00000286301 CROCC2H7BZ55 1655 aa12.19□□□□□ -0.46
CSF1R-201ENST00000286301 ZBTB7CA1YPR0 619 aa12.19□□□□□ -0.46
CSF1R-201ENST00000286301 HDGFL2Q7Z4V5 671 aaPredicted RBP12.19□□□□□ -0.46
CSF1R-201ENST00000286301 GOLGA2Q08379 1002 aa12.19□□□□□ -0.46
CSF1R-201ENST00000286301 SLC52A1Q9NWF4 448 aa12.19□□□□□ -0.46
CSF1R-201ENST00000286301 UGGT1Q9NYU2 1555 aa12.18□□□□□ -0.46
CSF1R-201ENST00000286301 MAST1Q9Y2H9 1570 aa12.18□□□□□ -0.46
CSF1R-201ENST00000286301 PER1O15534 1290 aaPredicted RBP12.18□□□□□ -0.46
CSF1R-201ENST00000286301 SHROOM2Q13796 1616 aa12.18□□□□□ -0.46
CSF1R-201ENST00000286301 MAPK8IP3Q9UPT6 1336 aa12.18□□□□□ -0.46
CSF1R-201ENST00000286301 CGNL1Q0VF96 1302 aa12.17□□□□□ -0.46
CSF1R-201ENST00000286301 TERF2IPQ9NYB0 399 aa12.17□□□□□ -0.46
CSF1R-201ENST00000286301 MTHFSP49914 203 aa12.17□□□□□ -0.46
CSF1R-201ENST00000286301 WAPLQ7Z5K2 1190 aa12.17□□□□□ -0.46
CSF1R-201ENST00000286301 TXNDC2Q86VQ3 553 aa12.16□□□□□ -0.46
CSF1R-201ENST00000286301 SCAF11Q99590 1463 aaKnown RBP12.16□□□□□ -0.46
CSF1R-201ENST00000286301 CEBPAP49715 358 aaPredicted RBP12.16□□□□□ -0.46
CSF1R-201ENST00000286301 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
CSF1R-201ENST00000286301 RRP1P56182 461 aaKnown RBP12.16□□□□□ -0.46
CSF1R-201ENST00000286301 BCL2L13Q9BXK5 485 aa12.16□□□□□ -0.46
CSF1R-201ENST00000286301 ATP10AO60312 1499 aa12.16□□□□□ -0.46
CSF1R-201ENST00000286301 C14orf93Q9H972 538 aaKnown RBP12.15□□□□□ -0.46
CSF1R-201ENST00000286301 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
CSF1R-201ENST00000286301 RGS3P49796 1198 aa12.14□□□□□ -0.47
CSF1R-201ENST00000286301 YEATS2Q9ULM3 1422 aa12.14□□□□□ -0.47
CSF1R-201ENST00000286301 CABP1Q9NZU7 370 aa12.13□□□□□ -0.47
CSF1R-201ENST00000286301 POGZQ7Z3K3 1410 aa12.13□□□□□ -0.47
CSF1R-201ENST00000286301 AMER1Q5JTC6 1135 aaPredicted RBP12.13□□□□□ -0.47
CSF1R-201ENST00000286301 ZFYVE16Q7Z3T8 1539 aa12.13□□□□□ -0.47
CSF1R-201ENST00000286301 KDM5CP41229 1560 aa12.13□□□□□ -0.47
CSF1R-201ENST00000286301 CLUAP1Q96AJ1 413 aa12.12□□□□□ -0.47
CSF1R-201ENST00000286301 SLC26A8Q96RN1 970 aa12.12□□□□□ -0.47
CSF1R-201ENST00000286301 BCORL1Q5H9F3 1711 aa12.12□□□□□ -0.47
CSF1R-201ENST00000286301 RPGRIP1LQ68CZ1 1315 aa12.12□□□□□ -0.47
CSF1R-201ENST00000286301 KDM5DQ9BY66 1539 aa12.12□□□□□ -0.47
CSF1R-201ENST00000286301 LMOD2Q6P5Q4 547 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 CRBNQ96SW2 442 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 NPATQ14207 1427 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 ERICH6BQ5W0A0 696 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 CDK19Q9BWU1 502 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 CARD14Q9BXL6 1004 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 NSD3Q9BZ95 1437 aa12.11□□□□□ -0.47
CSF1R-201ENST00000286301 FBLN1P23142 703 aa12.1□□□□□ -0.47
CSF1R-201ENST00000286301 EID1Q9Y6B2 187 aa12.1□□□□□ -0.47
CSF1R-201ENST00000286301 GPRASP1Q5JY77 1395 aa12.1□□□□□ -0.47
CSF1R-201ENST00000286301 COL17A1Q9UMD9 1497 aaPredicted RBP12.09□□□□□ -0.47
CSF1R-201ENST00000286301 PARD3Q8TEW0 1356 aa12.09□□□□□ -0.47
CSF1R-201ENST00000286301 PLXNC1O60486 1568 aa12.08□□□□□ -0.48
CSF1R-201ENST00000286301 TCP11L2Q8N4U5 519 aa12.08□□□□□ -0.48
CSF1R-201ENST00000286301 SMG6Q86US8 1419 aaKnown RBP12.08□□□□□ -0.48
CSF1R-201ENST00000286301 FTSJ3Q8IY81 847 aaKnown RBP12.08□□□□□ -0.48
CSF1R-201ENST00000286301 HMOX1P09601 288 aa12.07□□□□□ -0.48
CSF1R-201ENST00000286301 IQGAP3Q86VI3 1631 aa12.06□□□□□ -0.48
CSF1R-201ENST00000286301 TSPOAP1O95153 1857 aa12.06□□□□□ -0.48
CSF1R-201ENST00000286301 ELL2O00472 640 aaPredicted RBP12.06□□□□□ -0.48
CSF1R-201ENST00000286301 NGDNQ8NEJ9 315 aaKnown RBP12.06□□□□□ -0.48
CSF1R-201ENST00000286301 PRDM15P57071 1507 aaPredicted RBP12.05□□□□□ -0.48
CSF1R-201ENST00000286301 BCAR3O75815 825 aa12.05□□□□□ -0.48
CSF1R-201ENST00000286301 SKAP1Q86WV1 359 aa12.05□□□□□ -0.48
CSF1R-201ENST00000286301 UNC13BO14795 1591 aa12.05□□□□□ -0.48
CSF1R-201ENST00000286301 EIF2AK4Q9P2K8 1649 aaKnown RBP12.04□□□□□ -0.48
CSF1R-201ENST00000286301 E9PSI1 815 aa12.04□□□□□ -0.48
CSF1R-201ENST00000286301 C20orf194Q5TEA3 1177 aa12.04□□□□□ -0.48
CSF1R-201ENST00000286301 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.04□□□□□ -0.48
CSF1R-201ENST00000286301 PMFBP1Q8TBY8 1022 aa12.04□□□□□ -0.48
CSF1R-201ENST00000286301 RUNDC1Q96C34 613 aa12.04□□□□□ -0.48
CSF1R-201ENST00000286301 BRPF3Q9ULD4 1205 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms