RNA–Protein interactions for RNA: ENST00000285176.13

CCDC144B-201, Transcript of coiled-coil domain containing 144B (pseudogene), humanhuman

BASIC

Gene CCDC144B, Length 4,310 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144B-201ENST00000285176 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
CCDC144B-201ENST00000285176 ZMYM3Q14202 1370 aa12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 LTV1Q96GA3 475 aaPredicted RBP12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 LAS1LQ9Y4W2 734 aaKnown RBP12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 RTEL1-TNFRSF6BF6WH68 1400 aa12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 NPATQ14207 1427 aa12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 CABP1Q9NZU7 370 aa12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 DISP3Q9P2K9 1392 aa12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 GCC2Q8IWJ2 1684 aa12.01□□□□□ -0.49
CCDC144B-201ENST00000285176 NEFMP07197 916 aa12□□□□□ -0.49
CCDC144B-201ENST00000285176 EVC2Q86UK5 1308 aa12□□□□□ -0.49
CCDC144B-201ENST00000285176 ARHGEF5Q12774 1597 aa11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 CANXP27824 592 aaKnown RBP11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 HAP1P54257 671 aaPredicted RBP11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 U2AF1L5P0DN76 240 aaPredicted RBP11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 U2AF1Q01081 240 aaKnown RBP eCLIP11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 ZFYVE16Q7Z3T8 1539 aa11.99□□□□□ -0.49
CCDC144B-201ENST00000285176 COL17A1Q9UMD9 1497 aaPredicted RBP11.98□□□□□ -0.49
CCDC144B-201ENST00000285176 MYT1Q01538 1121 aa11.98□□□□□ -0.49
CCDC144B-201ENST00000285176 PLA2R1Q13018 1463 aa11.98□□□□□ -0.49
CCDC144B-201ENST00000285176 THEMISQ8N1K5 641 aaPredicted RBP11.98□□□□□ -0.49
CCDC144B-201ENST00000285176 CDK19Q9BWU1 502 aa11.98□□□□□ -0.49
CCDC144B-201ENST00000285176 NEO1Q92859 1461 aa11.97□□□□□ -0.49
CCDC144B-201ENST00000285176 ADGBQ8N7X0 1667 aa11.97□□□□□ -0.49
CCDC144B-201ENST00000285176 ATP10AO60312 1499 aa11.97□□□□□ -0.49
CCDC144B-201ENST00000285176 CNTLNQ9NXG0 1405 aa11.96□□□□□ -0.49
CCDC144B-201ENST00000285176 CCER2I3L3R5 266 aa11.96□□□□□ -0.5
CCDC144B-201ENST00000285176 PRAG1Q86YV5 1406 aa11.96□□□□□ -0.5
CCDC144B-201ENST00000285176 TERF2IPQ9NYB0 399 aa11.95□□□□□ -0.5
CCDC144B-201ENST00000285176 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.95□□□□□ -0.5
CCDC144B-201ENST00000285176 TNRQ92752 1358 aa11.95□□□□□ -0.5
CCDC144B-201ENST00000285176 NLRP13Q86W25 1043 aa11.94□□□□□ -0.5
CCDC144B-201ENST00000285176 CFAP53Q96M91 514 aa11.94□□□□□ -0.5
CCDC144B-201ENST00000285176 C14orf93Q9H972 538 aaKnown RBP11.94□□□□□ -0.5
CCDC144B-201ENST00000285176 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
CCDC144B-201ENST00000285176 AMOTL2Q9Y2J4 779 aa11.94□□□□□ -0.5
CCDC144B-201ENST00000285176 LTKP29376 864 aa11.94□□□□□ -0.5
CCDC144B-201ENST00000285176 MAST1Q9Y2H9 1570 aa11.93□□□□□ -0.5
CCDC144B-201ENST00000285176 TESK2Q96S53 571 aa11.93□□□□□ -0.5
CCDC144B-201ENST00000285176 ANKLE2Q86XL3 938 aa11.93□□□□□ -0.5
CCDC144B-201ENST00000285176 RALBP1Q15311 655 aa11.92□□□□□ -0.5
CCDC144B-201ENST00000285176 ESCO1Q5FWF5 840 aa11.92□□□□□ -0.5
CCDC144B-201ENST00000285176 PROSER2Q86WR7 435 aaPredicted RBP11.92□□□□□ -0.5
CCDC144B-201ENST00000285176 MYBBP1AQ9BQG0 1328 aaKnown RBP11.91□□□□□ -0.5
CCDC144B-201ENST00000285176 HMOX1P09601 288 aa11.91□□□□□ -0.5
CCDC144B-201ENST00000285176 MTHFSP49914 203 aa11.91□□□□□ -0.5
CCDC144B-201ENST00000285176 PRDM15P57071 1507 aaPredicted RBP11.91□□□□□ -0.5
CCDC144B-201ENST00000285176 MLH3Q9UHC1 1453 aa11.91□□□□□ -0.5
CCDC144B-201ENST00000285176 HECW2Q9P2P5 1572 aa11.9□□□□□ -0.5
CCDC144B-201ENST00000285176 RRS1Q15050 365 aaKnown RBP11.9□□□□□ -0.5
CCDC144B-201ENST00000285176 ADAMTS8Q9UP79 889 aa11.9□□□□□ -0.5
CCDC144B-201ENST00000285176 APAF1O14727 1248 aa11.9□□□□□ -0.51
CCDC144B-201ENST00000285176 RTL5Q5HYW3 569 aaPredicted RBP11.9□□□□□ -0.51
CCDC144B-201ENST00000285176 CGNL1Q0VF96 1302 aa11.89□□□□□ -0.51
CCDC144B-201ENST00000285176 FRAT1Q92837 279 aaPredicted RBP11.89□□□□□ -0.51
CCDC144B-201ENST00000285176 ZRANB1Q9UGI0 708 aa11.89□□□□□ -0.51
CCDC144B-201ENST00000285176 MAPK8IP3Q9UPT6 1336 aa11.89□□□□□ -0.51
CCDC144B-201ENST00000285176 RPGRIP1LQ68CZ1 1315 aa11.88□□□□□ -0.51
CCDC144B-201ENST00000285176 RIMS2Q9UQ26 1411 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 PSME1Q06323 249 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 CDCA7LQ96GN5 454 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 CROCC2H7BZ55 1655 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 NUDT16Q96DE0 195 aaKnown RBP11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 ELL2O00472 640 aaPredicted RBP11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 FOXO3O43524 673 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 KCNA6P17658 529 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 PPP2R1AP30153 589 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 BCL2L13Q9BXK5 485 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 NUDCQ9Y266 331 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 NME9Q86XW9 330 aa11.87□□□□□ -0.51
CCDC144B-201ENST00000285176 NLRP6P59044 892 aa11.86□□□□□ -0.51
CCDC144B-201ENST00000285176 AMPHP49418 695 aa11.86□□□□□ -0.51
CCDC144B-201ENST00000285176 STAC3Q96MF2 364 aa11.86□□□□□ -0.51
CCDC144B-201ENST00000285176 PLIN1O60240 522 aa11.86□□□□□ -0.51
CCDC144B-201ENST00000285176 COG3Q96JB2 828 aa11.86□□□□□ -0.51
CCDC144B-201ENST00000285176 UHRF1BP1Q6BDS2 1440 aa11.86□□□□□ -0.51
CCDC144B-201ENST00000285176 B4GALNT3Q6L9W6 998 aa11.85□□□□□ -0.51
CCDC144B-201ENST00000285176 KIDINS220Q9ULH0 1771 aa11.85□□□□□ -0.51
CCDC144B-201ENST00000285176 DIP2BQ9P265 1576 aa11.85□□□□□ -0.51
CCDC144B-201ENST00000285176 RALGAPBQ86X10 1494 aa11.85□□□□□ -0.51
CCDC144B-201ENST00000285176 TCERG1O14776 1098 aaKnown RBP11.85□□□□□ -0.51
CCDC144B-201ENST00000285176 NSD3Q9BZ95 1437 aa11.85□□□□□ -0.51
CCDC144B-201ENST00000285176 CARD14Q9BXL6 1004 aa11.84□□□□□ -0.51
CCDC144B-201ENST00000285176 PLEKHH1Q9ULM0 1364 aa11.84□□□□□ -0.51
CCDC144B-201ENST00000285176 SCAF11Q99590 1463 aaKnown RBP11.84□□□□□ -0.51
CCDC144B-201ENST00000285176 ABTB2Q8N961 1025 aa11.84□□□□□ -0.51
CCDC144B-201ENST00000285176 SPATA31E1Q6ZUB1 1445 aa11.83□□□□□ -0.52
CCDC144B-201ENST00000285176 NPM2Q86SE8 214 aaKnown RBP11.83□□□□□ -0.52
CCDC144B-201ENST00000285176 ZBTB47Q9UFB7 747 aaPredicted RBP11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 CEP152O94986 1710 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 ABCA6Q8N139 1617 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 CSB-PGBD3P0DP91 1061 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 USP35Q9P2H5 1018 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 ATF3P18847 181 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 DDX17Q92841 729 aaKnown RBP11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 CCDC136Q96JN2 1154 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 ABCC3O15438 1527 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 CCDC61Q9Y6R9 512 aa11.82□□□□□ -0.52
CCDC144B-201ENST00000285176 PLXNC1O60486 1568 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms