RNA–Protein interactions for RNA: ENST00000281821.6

EPHA4-201, Transcript of EPH receptor A4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHA4, Length 6,346 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-201ENST00000281821 ZBTB47Q9UFB7 747 aaPredicted RBP10.29□□□□□ -0.76
EPHA4-201ENST00000281821 PIK3R4Q99570 1358 aa10.29□□□□□ -0.76
EPHA4-201ENST00000281821 CFAP70Q5T0N1 1121 aa10.29□□□□□ -0.76
EPHA4-201ENST00000281821 DIP2BQ9P265 1576 aa10.29□□□□□ -0.76
EPHA4-201ENST00000281821 SAFB2Q14151 953 aaKnown RBP eCLIP10.28□□□□□ -0.76
EPHA4-201ENST00000281821 PTPRKQ15262 1439 aa10.28□□□□□ -0.76
EPHA4-201ENST00000281821 YEATS2Q9ULM3 1422 aa10.28□□□□□ -0.76
EPHA4-201ENST00000281821 CHMP4BQ9H444 224 aaKnown RBP10.28□□□□□ -0.76
EPHA4-201ENST00000281821 LMOD3Q0VAK6 560 aa10.27□□□□□ -0.76
EPHA4-201ENST00000281821 FBXO31Q5XUX0 539 aaPredicted RBP10.27□□□□□ -0.76
EPHA4-201ENST00000281821 TOM1O60784 492 aa10.27□□□□□ -0.77
EPHA4-201ENST00000281821 MINK1Q8N4C8 1332 aaPredicted RBP10.27□□□□□ -0.77
EPHA4-201ENST00000281821 NLRP13Q86W25 1043 aa10.26□□□□□ -0.77
EPHA4-201ENST00000281821 CCDC61Q9Y6R9 512 aa10.26□□□□□ -0.77
EPHA4-201ENST00000281821 PAK3O75914 559 aaPredicted RBP10.26□□□□□ -0.77
EPHA4-201ENST00000281821 NUTM2DQ5VT03 806 aaPredicted RBP10.26□□□□□ -0.77
EPHA4-201ENST00000281821 TMEM2Q9UHN6 1383 aa10.25□□□□□ -0.77
EPHA4-201ENST00000281821 ADGBQ8N7X0 1667 aa10.25□□□□□ -0.77
EPHA4-201ENST00000281821 MSH6P52701 1360 aa10.25□□□□□ -0.77
EPHA4-201ENST00000281821 PZPP20742 1482 aa10.25□□□□□ -0.77
EPHA4-201ENST00000281821 ZMYM4Q5VZL5 1548 aa10.25□□□□□ -0.77
EPHA4-201ENST00000281821 CANXP27824 592 aaKnown RBP10.25□□□□□ -0.77
EPHA4-201ENST00000281821 CEBPAP49715 358 aaPredicted RBP10.25□□□□□ -0.77
EPHA4-201ENST00000281821 MS4A1P11836 297 aa10.25□□□□□ -0.77
EPHA4-201ENST00000281821 SCAF11Q99590 1463 aaKnown RBP10.25□□□□□ -0.77
EPHA4-201ENST00000281821 EIF2AK4Q9P2K8 1649 aaKnown RBP10.24□□□□□ -0.77
EPHA4-201ENST00000281821 KCNA6P17658 529 aa10.24□□□□□ -0.77
EPHA4-201ENST00000281821 CSB-PGBD3P0DP91 1061 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 SLC26A8Q96RN1 970 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 PRAM1Q96QH2 718 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 AMOTL2Q9Y2J4 779 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 NOS1P29475 1434 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 AMPHP49418 695 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 LMTK2Q8IWU2 1503 aa10.23□□□□□ -0.77
EPHA4-201ENST00000281821 ARHGEF40Q8TER5 1519 aa10.22□□□□□ -0.77
EPHA4-201ENST00000281821 KCNH5Q8NCM2 988 aa10.22□□□□□ -0.77
EPHA4-201ENST00000281821 C19orf44Q9H6X5 657 aa10.22□□□□□ -0.77
EPHA4-201ENST00000281821 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
EPHA4-201ENST00000281821 KDM5CP41229 1560 aa10.21□□□□□ -0.77
EPHA4-201ENST00000281821 PTPRTO14522 1441 aa10.21□□□□□ -0.77
EPHA4-201ENST00000281821 ZFYVE9O95405 1425 aa10.21□□□□□ -0.78
EPHA4-201ENST00000281821 BRD4O60885 1362 aaPredicted RBP10.21□□□□□ -0.78
EPHA4-201ENST00000281821 SENP3Q9H4L4 574 aaPredicted RBP10.2□□□□□ -0.78
EPHA4-201ENST00000281821 NSD2O96028 1365 aa10.2□□□□□ -0.78
EPHA4-201ENST00000281821 PPM1GO15355 546 aaPredicted RBP10.2□□□□□ -0.78
EPHA4-201ENST00000281821 HDAC5Q9UQL6 1122 aa10.2□□□□□ -0.78
EPHA4-201ENST00000281821 RTF1Q92541 710 aaKnown RBP10.2□□□□□ -0.78
EPHA4-201ENST00000281821 ERVK-7P63135 1459 aa10.19□□□□□ -0.78
EPHA4-201ENST00000281821 PLEKHG1Q9ULL1 1385 aa10.19□□□□□ -0.78
EPHA4-201ENST00000281821 A2ML1A8K2U0 1454 aa10.19□□□□□ -0.78
EPHA4-201ENST00000281821 GCC2Q8IWJ2 1684 aa10.19□□□□□ -0.78
EPHA4-201ENST00000281821 EFCAB6Q5THR3 1501 aa10.19□□□□□ -0.78
EPHA4-201ENST00000281821 TMEM132EQ6IEE7 984 aa10.19□□□□□ -0.78
EPHA4-201ENST00000281821 NPHP3Q7Z494 1330 aa10.18□□□□□ -0.78
EPHA4-201ENST00000281821 ABCC3O15438 1527 aa10.18□□□□□ -0.78
EPHA4-201ENST00000281821 MYBBP1AQ9BQG0 1328 aaKnown RBP10.18□□□□□ -0.78
EPHA4-201ENST00000281821 ABCC11Q96J66 1382 aa10.18□□□□□ -0.78
EPHA4-201ENST00000281821 WASLO00401 505 aaPredicted RBP10.18□□□□□ -0.78
EPHA4-201ENST00000281821 CCDC7Q96M83 1385 aa10.18□□□□□ -0.78
EPHA4-201ENST00000281821 REREQ9P2R6 1566 aa10.18□□□□□ -0.78
EPHA4-201ENST00000281821 ESCO1Q5FWF5 840 aa10.18□□□□□ -0.78
EPHA4-201ENST00000281821 RALGAPBQ86X10 1494 aa10.17□□□□□ -0.78
EPHA4-201ENST00000281821 PHF8Q9UPP1 1060 aa10.17□□□□□ -0.78
EPHA4-201ENST00000281821 CDC42BPAQ5VT25 1732 aa10.17□□□□□ -0.78
EPHA4-201ENST00000281821 HNRNPUQ00839 825 aaKnown RBP eCLIP10.17□□□□□ -0.78
EPHA4-201ENST00000281821 U2SURPO15042 1029 aaKnown RBP10.17□□□□□ -0.78
EPHA4-201ENST00000281821 TTC21AQ8NDW8 1320 aa10.17□□□□□ -0.78
EPHA4-201ENST00000281821 CDK19Q9BWU1 502 aa10.17□□□□□ -0.78
EPHA4-201ENST00000281821 ADGRF5Q8IZF2 1346 aa10.16□□□□□ -0.78
EPHA4-201ENST00000281821 FAM9BQ8IZU0 186 aa10.16□□□□□ -0.78
EPHA4-201ENST00000281821 TRPM2O94759 1503 aa10.16□□□□□ -0.78
EPHA4-201ENST00000281821 PANK3Q9H999 370 aa10.16□□□□□ -0.78
EPHA4-201ENST00000281821 SMG6Q86US8 1419 aaKnown RBP10.16□□□□□ -0.78
EPHA4-201ENST00000281821 SBNO2Q9Y2G9 1366 aa10.16□□□□□ -0.78
EPHA4-201ENST00000281821 NLRP6P59044 892 aa10.15□□□□□ -0.78
EPHA4-201ENST00000281821 INO80Q9ULG1 1556 aaPredicted RBP10.15□□□□□ -0.78
EPHA4-201ENST00000281821 PRDM15P57071 1507 aaPredicted RBP10.15□□□□□ -0.78
EPHA4-201ENST00000281821 PDE3BQ13370 1112 aa10.15□□□□□ -0.78
EPHA4-201ENST00000281821 NUDT16Q96DE0 195 aaKnown RBP10.15□□□□□ -0.78
EPHA4-201ENST00000281821 A0A0G2JS52 829 aa10.15□□□□□ -0.78
EPHA4-201ENST00000281821 PRAG1Q86YV5 1406 aa10.15□□□□□ -0.78
EPHA4-201ENST00000281821 MYOM2P54296 1465 aa10.15□□□□□ -0.78
EPHA4-201ENST00000281821 TET3O43151 1660 aa10.15□□□□□ -0.79
EPHA4-201ENST00000281821 EVA1CP58658 441 aa10.15□□□□□ -0.79
EPHA4-201ENST00000281821 CC2D1BQ5T0F9 858 aaKnown RBP10.14□□□□□ -0.79
EPHA4-201ENST00000281821 MEX3CQ5U5Q3 659 aaKnown RBP10.14□□□□□ -0.79
EPHA4-201ENST00000281821 NPHP4O75161 1426 aaPredicted RBP10.14□□□□□ -0.79
EPHA4-201ENST00000281821 EIF5BO60841 1220 aaKnown RBP10.14□□□□□ -0.79
EPHA4-201ENST00000281821 DIP2CQ9Y2E4 1556 aa10.14□□□□□ -0.79
EPHA4-201ENST00000281821 HIRIP3Q9BW71 556 aaPredicted RBP10.14□□□□□ -0.79
EPHA4-201ENST00000281821 U2AF1L5P0DN76 240 aaPredicted RBP10.13□□□□□ -0.79
EPHA4-201ENST00000281821 U2AF1Q01081 240 aaKnown RBP eCLIP10.13□□□□□ -0.79
EPHA4-201ENST00000281821 MYH16Q9H6N6 1097 aa10.13□□□□□ -0.79
EPHA4-201ENST00000281821 UGGT1Q9NYU2 1555 aa10.13□□□□□ -0.79
EPHA4-201ENST00000281821 MAP3K4Q9Y6R4 1608 aa10.13□□□□□ -0.79
EPHA4-201ENST00000281821 NBPF1Q3BBV0 1214 aa10.13□□□□□ -0.79
EPHA4-201ENST00000281821 NBPF8Q3BBV2 869 aa10.12□□□□□ -0.79
EPHA4-201ENST00000281821 KIF7Q2M1P5 1343 aa10.12□□□□□ -0.79
EPHA4-201ENST00000281821 RAPGEF4Q8WZA2 1011 aa10.12□□□□□ -0.79
EPHA4-201ENST00000281821 CCDC9Q9Y3X0 531 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms