RNA–Protein interactions for RNA: ENST00000278947.5

SCN2B-201, Transcript of sodium voltage-gated channel beta subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN2B, Length 5,826 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2B-201ENST00000278947 NAP1L2Q9ULW6 460 aaPredicted RBP16.5■□□□□ 0.23
SCN2B-201ENST00000278947 PANK3Q9H999 370 aa16.49■□□□□ 0.23
SCN2B-201ENST00000278947 HFM1A2PYH4 1435 aa16.48■□□□□ 0.23
SCN2B-201ENST00000278947 USP47Q96K76 1375 aa16.48■□□□□ 0.23
SCN2B-201ENST00000278947 RAPGEF3O95398 923 aa16.48■□□□□ 0.23
SCN2B-201ENST00000278947 RAPGEF4Q8WZA2 1011 aa16.48■□□□□ 0.23
SCN2B-201ENST00000278947 ZNF771Q7L3S4 317 aaPredicted RBP16.47■□□□□ 0.23
SCN2B-201ENST00000278947 KIAA1211Q6ZU35 1233 aa16.46■□□□□ 0.23
SCN2B-201ENST00000278947 ITPRIPQ8IWB1 547 aa16.46■□□□□ 0.22
SCN2B-201ENST00000278947 MYBBP1AQ9BQG0 1328 aaKnown RBP16.45■□□□□ 0.22
SCN2B-201ENST00000278947 RPGRIP1LQ68CZ1 1315 aa16.45■□□□□ 0.22
SCN2B-201ENST00000278947 SMC4Q9NTJ3 1288 aa16.45■□□□□ 0.22
SCN2B-201ENST00000278947 URB2Q14146 1524 aaKnown RBP16.45■□□□□ 0.22
SCN2B-201ENST00000278947 WASHC2AQ641Q2 1341 aa16.45■□□□□ 0.22
SCN2B-201ENST00000278947 PKNOX2Q96KN3 472 aa16.45■□□□□ 0.22
SCN2B-201ENST00000278947 SYAP1Q96A49 352 aaPredicted RBP16.44■□□□□ 0.22
SCN2B-201ENST00000278947 ESCO1Q5FWF5 840 aa16.44■□□□□ 0.22
SCN2B-201ENST00000278947 DIAPH1O60610 1272 aaKnown RBP16.43■□□□□ 0.22
SCN2B-201ENST00000278947 RWDD1Q9H446 243 aaPredicted RBP16.43■□□□□ 0.22
SCN2B-201ENST00000278947 DMRT2Q9Y5R5 561 aa16.43■□□□□ 0.22
SCN2B-201ENST00000278947 SF3B2Q13435 895 aaKnown RBP16.43■□□□□ 0.22
SCN2B-201ENST00000278947 PLB1Q6P1J6 1458 aa16.42■□□□□ 0.22
SCN2B-201ENST00000278947 TCERG1O14776 1098 aaKnown RBP16.42■□□□□ 0.22
SCN2B-201ENST00000278947 SYTL4Q96C24 671 aaPredicted RBP16.42■□□□□ 0.22
SCN2B-201ENST00000278947 HMGB2P26583 209 aaKnown RBP16.42■□□□□ 0.22
SCN2B-201ENST00000278947 PDE3BQ13370 1112 aa16.42■□□□□ 0.22
SCN2B-201ENST00000278947 AKNAQ7Z591 1439 aa16.42■□□□□ 0.22
SCN2B-201ENST00000278947 SUPT6HQ7KZ85 1726 aaKnown RBP16.42■□□□□ 0.22
SCN2B-201ENST00000278947 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
SCN2B-201ENST00000278947 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
SCN2B-201ENST00000278947 KIF14Q15058 1648 aa16.41■□□□□ 0.22
SCN2B-201ENST00000278947 ARAP1Q96P48 1450 aa16.41■□□□□ 0.22
SCN2B-201ENST00000278947 USP35Q9P2H5 1018 aa16.41■□□□□ 0.22
SCN2B-201ENST00000278947 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
SCN2B-201ENST00000278947 UNC13AQ9UPW8 1703 aa16.4■□□□□ 0.22
SCN2B-201ENST00000278947 TEX14Q8IWB6 1497 aa16.39■□□□□ 0.22
SCN2B-201ENST00000278947 SLC4A10Q6U841 1118 aa16.39■□□□□ 0.22
SCN2B-201ENST00000278947 EPRSP07814 1512 aaKnown RBP16.39■□□□□ 0.21
SCN2B-201ENST00000278947 NLRP2Q9NX02 1062 aa16.39■□□□□ 0.21
SCN2B-201ENST00000278947 ADGRL1O94910 1474 aa16.39■□□□□ 0.21
SCN2B-201ENST00000278947 NLRP6P59044 892 aa16.39■□□□□ 0.21
SCN2B-201ENST00000278947 SMG6Q86US8 1419 aaKnown RBP16.38■□□□□ 0.21
SCN2B-201ENST00000278947 GSE1Q14687 1217 aa16.38■□□□□ 0.21
SCN2B-201ENST00000278947 PMFBP1Q8TBY8 1022 aa16.38■□□□□ 0.21
SCN2B-201ENST00000278947 PODXL2Q9NZ53 605 aa16.38■□□□□ 0.21
SCN2B-201ENST00000278947 CCDC146Q8IYE0 955 aa16.38■□□□□ 0.21
SCN2B-201ENST00000278947 NGEFQ8N5V2 710 aa16.38■□□□□ 0.21
SCN2B-201ENST00000278947 DDX58O95786 925 aaKnown RBP16.37■□□□□ 0.21
SCN2B-201ENST00000278947 RCAN3Q9UKA8 241 aa16.37■□□□□ 0.21
SCN2B-201ENST00000278947 CCDC141Q6ZP82 1450 aa16.37■□□□□ 0.21
SCN2B-201ENST00000278947 DENND4BO75064 1496 aaPredicted RBP16.36■□□□□ 0.21
SCN2B-201ENST00000278947 ABTB2Q8N961 1025 aa16.36■□□□□ 0.21
SCN2B-201ENST00000278947 APBB1O00213 710 aa16.35■□□□□ 0.21
SCN2B-201ENST00000278947 APPP05067 770 aa16.35■□□□□ 0.21
SCN2B-201ENST00000278947 ZNF692Q9BU19 519 aaPredicted RBP16.35■□□□□ 0.21
SCN2B-201ENST00000278947 TPM4P67936 248 aa16.34■□□□□ 0.21
SCN2B-201ENST00000278947 FAM13BQ9NYF5 915 aa16.34■□□□□ 0.21
SCN2B-201ENST00000278947 GNL2Q13823 731 aaKnown RBP16.34■□□□□ 0.21
SCN2B-201ENST00000278947 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
SCN2B-201ENST00000278947 ANKRD30BQ9BXX2 1392 aa16.33■□□□□ 0.21
SCN2B-201ENST00000278947 DAPK1P53355 1430 aa16.33■□□□□ 0.2
SCN2B-201ENST00000278947 ZNF608Q9ULD9 1512 aaPredicted RBP16.33■□□□□ 0.2
SCN2B-201ENST00000278947 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
SCN2B-201ENST00000278947 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
SCN2B-201ENST00000278947 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
SCN2B-201ENST00000278947 TIAM1Q13009 1591 aa16.31■□□□□ 0.2
SCN2B-201ENST00000278947 KIAA1107Q9UPP5 1409 aa16.31■□□□□ 0.2
SCN2B-201ENST00000278947 PRAM1Q96QH2 718 aa16.31■□□□□ 0.2
SCN2B-201ENST00000278947 PRKCSHP14314 528 aaPredicted RBP16.31■□□□□ 0.2
SCN2B-201ENST00000278947 ARHGEF11O15085 1522 aa16.31■□□□□ 0.2
SCN2B-201ENST00000278947 CDK13Q14004 1512 aaKnown RBP16.31■□□□□ 0.2
SCN2B-201ENST00000278947 LRRFIP1Q32MZ4 808 aaKnown RBP16.31■□□□□ 0.2
SCN2B-201ENST00000278947 PIP4K2BP78356 416 aa16.3■□□□□ 0.2
SCN2B-201ENST00000278947 CLSTN1O94985 981 aa16.3■□□□□ 0.2
SCN2B-201ENST00000278947 HTATSF1O43719 755 aaKnown RBP16.3■□□□□ 0.2
SCN2B-201ENST00000278947 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
SCN2B-201ENST00000278947 ERBINQ96RT1 1412 aa16.29■□□□□ 0.2
SCN2B-201ENST00000278947 E9PSI1 815 aa16.29■□□□□ 0.2
SCN2B-201ENST00000278947 PLEKHO1Q53GL0 409 aaPredicted RBP16.29■□□□□ 0.2
SCN2B-201ENST00000278947 CFAP70Q5T0N1 1121 aa16.29■□□□□ 0.2
SCN2B-201ENST00000278947 NUTM2BA6NNL0 878 aaPredicted RBP16.29■□□□□ 0.2
SCN2B-201ENST00000278947 NUTM2EB1AL46 878 aaPredicted RBP16.29■□□□□ 0.2
SCN2B-201ENST00000278947 NUTM2AQ8IVF1 878 aaPredicted RBP16.29■□□□□ 0.2
SCN2B-201ENST00000278947 AMOTL1Q8IY63 956 aa16.28■□□□□ 0.2
SCN2B-201ENST00000278947 RTEL1-TNFRSF6BF6WH68 1400 aa16.27■□□□□ 0.2
SCN2B-201ENST00000278947 TATP17735 454 aaPredicted RBP16.27■□□□□ 0.2
SCN2B-201ENST00000278947 NUTM2GQ5VZR2 741 aa16.27■□□□□ 0.2
SCN2B-201ENST00000278947 PATL2C9JE40 543 aaKnown RBP16.27■□□□□ 0.2
SCN2B-201ENST00000278947 EIF2S2P20042 333 aaKnown RBP16.27■□□□□ 0.19
SCN2B-201ENST00000278947 MFAP1P55081 439 aaKnown RBP16.27■□□□□ 0.19
SCN2B-201ENST00000278947 KLHL34Q8N239 644 aa16.26■□□□□ 0.19
SCN2B-201ENST00000278947 DDX11L8A8MPP1 907 aa16.26■□□□□ 0.19
SCN2B-201ENST00000278947 GAS2L2Q8NHY3 880 aa16.26■□□□□ 0.19
SCN2B-201ENST00000278947 RRP7AQ9Y3A4 280 aaKnown RBP16.26■□□□□ 0.19
SCN2B-201ENST00000278947 ROCK1Q13464 1354 aa16.26■□□□□ 0.19
SCN2B-201ENST00000278947 FANCAO15360 1455 aa16.26■□□□□ 0.19
SCN2B-201ENST00000278947 TRIM34Q9BYJ4 488 aa16.25■□□□□ 0.19
SCN2B-201ENST00000278947 STRN4Q9NRL3 753 aa16.25■□□□□ 0.19
SCN2B-201ENST00000278947 C9orf78Q9NZ63 289 aaPredicted RBP16.25■□□□□ 0.19
SCN2B-201ENST00000278947 GPS2Q13227 327 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms