RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 EIF2AK4Q9P2K8 1649 aaKnown RBP9.94□□□□□ -0.82
TRIM6-201ENST00000278302 UHRF1BP1LA0JNW5 1464 aa9.94□□□□□ -0.82
TRIM6-201ENST00000278302 COL17A1Q9UMD9 1497 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-201ENST00000278302 ABCC1P33527 1531 aa9.94□□□□□ -0.82
TRIM6-201ENST00000278302 HSP90AA2PQ14568 343 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-201ENST00000278302 ATP10AO60312 1499 aa9.94□□□□□ -0.82
TRIM6-201ENST00000278302 PRDM15P57071 1507 aaPredicted RBP9.94□□□□□ -0.82
TRIM6-201ENST00000278302 MAGI2Q86UL8 1455 aa9.93□□□□□ -0.82
TRIM6-201ENST00000278302 KANK1Q14678 1352 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 KIF3BO15066 747 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 RRP1P56182 461 aaKnown RBP9.92□□□□□ -0.82
TRIM6-201ENST00000278302 CLASP1Q7Z460 1538 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 MS4A1P11836 297 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 RCAN3Q9UKA8 241 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 KNSTRNQ9Y448 316 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 LAMC1P11047 1609 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 PDE3BQ13370 1112 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 POGKQ9P215 609 aa9.92□□□□□ -0.82
TRIM6-201ENST00000278302 RTEL1-TNFRSF6BF6WH68 1400 aa9.91□□□□□ -0.82
TRIM6-201ENST00000278302 CDCA8Q53HL2 280 aa9.91□□□□□ -0.82
TRIM6-201ENST00000278302 PLIN1O60240 522 aa9.9□□□□□ -0.83
TRIM6-201ENST00000278302 STAC3Q96MF2 364 aa9.9□□□□□ -0.83
TRIM6-201ENST00000278302 CDCA7LQ96GN5 454 aa9.89□□□□□ -0.83
TRIM6-201ENST00000278302 HSP90AA1P07900 732 aaKnown RBP9.89□□□□□ -0.83
TRIM6-201ENST00000278302 SCAPERQ9BY12 1400 aa9.88□□□□□ -0.83
TRIM6-201ENST00000278302 FANCAO15360 1455 aa9.88□□□□□ -0.83
TRIM6-201ENST00000278302 WDR7Q9Y4E6 1490 aa9.88□□□□□ -0.83
TRIM6-201ENST00000278302 WDR43Q15061 677 aaKnown RBP eCLIP9.88□□□□□ -0.83
TRIM6-201ENST00000278302 ZFYVE16Q7Z3T8 1539 aa9.87□□□□□ -0.83
TRIM6-201ENST00000278302 A0A0U1RQG5 324 aaPredicted RBP9.87□□□□□ -0.83
TRIM6-201ENST00000278302 PNNQ9H307 717 aaKnown RBP9.87□□□□□ -0.83
TRIM6-201ENST00000278302 TRPM2O94759 1503 aa9.87□□□□□ -0.83
TRIM6-201ENST00000278302 ADAMTS8Q9UP79 889 aa9.86□□□□□ -0.83
TRIM6-201ENST00000278302 ARAP3Q8WWN8 1544 aa9.86□□□□□ -0.83
TRIM6-201ENST00000278302 NPM1P06748 294 aaKnown RBP eCLIP9.86□□□□□ -0.83
TRIM6-201ENST00000278302 SCAF11Q99590 1463 aaKnown RBP9.86□□□□□ -0.83
TRIM6-201ENST00000278302 PTPRTO14522 1441 aa9.86□□□□□ -0.83
TRIM6-201ENST00000278302 ATP7AQ04656 1500 aa9.86□□□□□ -0.83
TRIM6-201ENST00000278302 CHGAP10645 457 aaKnown RBP9.86□□□□□ -0.83
TRIM6-201ENST00000278302 PPP2R1AP30153 589 aa9.86□□□□□ -0.83
TRIM6-201ENST00000278302 ADGRL1O94910 1474 aa9.86□□□□□ -0.83
TRIM6-201ENST00000278302 MADDQ8WXG6 1647 aa9.85□□□□□ -0.83
TRIM6-201ENST00000278302 EIF3AQ14152 1382 aaKnown RBP9.85□□□□□ -0.83
TRIM6-201ENST00000278302 RRP9O43818 475 aaKnown RBP9.85□□□□□ -0.83
TRIM6-201ENST00000278302 RNF17Q9BXT8 1623 aaKnown RBP9.85□□□□□ -0.83
TRIM6-201ENST00000278302 SPHKAPQ2M3C7 1700 aa9.85□□□□□ -0.83
TRIM6-201ENST00000278302 CFAP70Q5T0N1 1121 aa9.85□□□□□ -0.83
TRIM6-201ENST00000278302 CLTCL1P53675 1640 aa9.85□□□□□ -0.83
TRIM6-201ENST00000278302 CEP152O94986 1710 aa9.84□□□□□ -0.83
TRIM6-201ENST00000278302 TET3O43151 1660 aa9.84□□□□□ -0.83
TRIM6-201ENST00000278302 BLMP54132 1417 aaPredicted RBP9.83□□□□□ -0.84
TRIM6-201ENST00000278302 INSRP06213 1382 aa9.83□□□□□ -0.84
TRIM6-201ENST00000278302 AMER1Q5JTC6 1135 aaPredicted RBP9.83□□□□□ -0.84
TRIM6-201ENST00000278302 CRBNQ96SW2 442 aa9.83□□□□□ -0.84
TRIM6-201ENST00000278302 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 ASXL2Q76L83 1435 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 IQGAP1P46940 1657 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 PANK2Q9BZ23 570 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 ADGRF5Q8IZF2 1346 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 DEPDC5O75140 1603 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 ABCA9Q8IUA7 1624 aa9.82□□□□□ -0.84
TRIM6-201ENST00000278302 SLKQ9H2G2 1235 aaPredicted RBP9.82□□□□□ -0.84
TRIM6-201ENST00000278302 INO80Q9ULG1 1556 aaPredicted RBP9.81□□□□□ -0.84
TRIM6-201ENST00000278302 RGS3P49796 1198 aa9.8□□□□□ -0.84
TRIM6-201ENST00000278302 GGT6Q6P531 493 aa9.8□□□□□ -0.84
TRIM6-201ENST00000278302 C8orf34Q49A92 452 aa9.8□□□□□ -0.84
TRIM6-201ENST00000278302 ZMYM4Q5VZL5 1548 aa9.8□□□□□ -0.84
TRIM6-201ENST00000278302 ASXL1Q8IXJ9 1541 aa9.8□□□□□ -0.84
TRIM6-201ENST00000278302 GZF1Q9H116 711 aaPredicted RBP9.8□□□□□ -0.84
TRIM6-201ENST00000278302 UGGT1Q9NYU2 1555 aa9.8□□□□□ -0.84
TRIM6-201ENST00000278302 SYNMO15061 1565 aa9.79□□□□□ -0.84
TRIM6-201ENST00000278302 XRCC6P12956 609 aaKnown RBP eCLIP9.79□□□□□ -0.84
TRIM6-201ENST00000278302 C20orf194Q5TEA3 1177 aa9.79□□□□□ -0.84
TRIM6-201ENST00000278302 GOLGA2Q08379 1002 aa9.79□□□□□ -0.84
TRIM6-201ENST00000278302 CCDC146Q8IYE0 955 aa9.79□□□□□ -0.84
TRIM6-201ENST00000278302 VWDEQ8N2E2 1590 aa9.79□□□□□ -0.84
TRIM6-201ENST00000278302 CLCN1P35523 988 aa9.78□□□□□ -0.84
TRIM6-201ENST00000278302 FAM161AQ3B820 660 aa9.78□□□□□ -0.84
TRIM6-201ENST00000278302 L1TD1Q5T7N2 865 aaKnown RBP9.78□□□□□ -0.84
TRIM6-201ENST00000278302 RBM10P98175 930 aaKnown RBP9.78□□□□□ -0.84
TRIM6-201ENST00000278302 TRAK1Q9UPV9 953 aa9.77□□□□□ -0.84
TRIM6-201ENST00000278302 KIF1BO60333 1816 aa9.77□□□□□ -0.85
TRIM6-201ENST00000278302 KDM5AP29375 1690 aaKnown RBP9.77□□□□□ -0.85
TRIM6-201ENST00000278302 ZNF518AQ6AHZ1 1483 aa9.77□□□□□ -0.85
TRIM6-201ENST00000278302 PLEKHH1Q9ULM0 1364 aa9.77□□□□□ -0.85
TRIM6-201ENST00000278302 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.77□□□□□ -0.85
TRIM6-201ENST00000278302 MAP3K4Q9Y6R4 1608 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 DUSP27Q5VZP5 1158 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 OSCARQ8IYS5 282 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 MYOM2P54296 1465 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 KIAA1210Q9ULL0 1709 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 PIK3C2GO75747 1445 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 NPC1L1Q9UHC9 1359 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 CENPJQ9HC77 1338 aaPredicted RBP9.76□□□□□ -0.85
TRIM6-201ENST00000278302 APAF1O14727 1248 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 NOS1P29475 1434 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 MROH1Q8NDA8 1641 aa9.76□□□□□ -0.85
TRIM6-201ENST00000278302 EFCAB6Q5THR3 1501 aa9.75□□□□□ -0.85
TRIM6-201ENST00000278302 CARD14Q9BXL6 1004 aa9.75□□□□□ -0.85
TRIM6-201ENST00000278302 CD109Q6YHK3 1445 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms