RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 PATL2C9JE40 543 aaKnown RBP16.59■□□□□ 0.25
NOTCH1-201ENST00000277541 MROH2BQ7Z745 1585 aa16.59■□□□□ 0.25
NOTCH1-201ENST00000277541 SASS6Q6UVJ0 657 aa16.58■□□□□ 0.25
NOTCH1-201ENST00000277541 CDR1P51861 262 aa16.58■□□□□ 0.24
NOTCH1-201ENST00000277541 MNS1Q8NEH6 495 aa16.58■□□□□ 0.24
NOTCH1-201ENST00000277541 HMGN5P82970 282 aaKnown RBP16.58■□□□□ 0.24
NOTCH1-201ENST00000277541 RRP12Q5JTH9 1297 aaKnown RBP16.57■□□□□ 0.24
NOTCH1-201ENST00000277541 C22orf23Q9BZE7 217 aa16.57■□□□□ 0.24
NOTCH1-201ENST00000277541 AKAP17AQ02040 695 aaKnown RBP16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 INTS3Q68E01 1043 aaKnown RBP16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 BICD2Q8TD16 824 aa16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 LETM1O95202 739 aaPredicted RBP16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 COG6Q9Y2V7 657 aa16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 PANK3Q9H999 370 aa16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 R3HCC1Q9Y3T6 440 aaKnown RBP16.56■□□□□ 0.24
NOTCH1-201ENST00000277541 RAPGEF2Q9Y4G8 1499 aa16.55■□□□□ 0.24
NOTCH1-201ENST00000277541 CNTLNQ9NXG0 1405 aa16.55■□□□□ 0.24
NOTCH1-201ENST00000277541 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
NOTCH1-201ENST00000277541 CCDC173Q0VFZ6 552 aa16.55■□□□□ 0.24
NOTCH1-201ENST00000277541 ZNF330Q9Y3S2 320 aaPredicted RBP16.55■□□□□ 0.24
NOTCH1-201ENST00000277541 RNF20Q5VTR2 975 aa16.54■□□□□ 0.24
NOTCH1-201ENST00000277541 PRM3Q9NNZ6 103 aa16.54■□□□□ 0.24
NOTCH1-201ENST00000277541 TRIM29Q14134 588 aa16.54■□□□□ 0.24
NOTCH1-201ENST00000277541 CSB-PGBD3P0DP91 1061 aa16.54■□□□□ 0.24
NOTCH1-201ENST00000277541 BCL2L13Q9BXK5 485 aa16.54■□□□□ 0.24
NOTCH1-201ENST00000277541 GGT6Q6P531 493 aa16.53■□□□□ 0.24
NOTCH1-201ENST00000277541 TOMM22Q9NS69 142 aa16.53■□□□□ 0.24
NOTCH1-201ENST00000277541 ANO2Q9NQ90 1003 aa16.53■□□□□ 0.24
NOTCH1-201ENST00000277541 ST20-MTHFSA0A0A6YYL1 179 aa16.53■□□□□ 0.24
NOTCH1-201ENST00000277541 RSPH4AQ5TD94 716 aa16.52■□□□□ 0.24
NOTCH1-201ENST00000277541 DZIP1LQ8IYY4 767 aaKnown RBP16.52■□□□□ 0.24
NOTCH1-201ENST00000277541 CPLX2Q6PUV4 134 aaKnown RBP16.52■□□□□ 0.24
NOTCH1-201ENST00000277541 CCP110O43303 1012 aa16.52■□□□□ 0.24
NOTCH1-201ENST00000277541 MARCH6O60337 910 aa16.52■□□□□ 0.24
NOTCH1-201ENST00000277541 DCTN1Q14203 1278 aa16.52■□□□□ 0.23
NOTCH1-201ENST00000277541 APPP05067 770 aa16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 PCMTD1Q96MG8 357 aaPredicted RBP16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 RDXP35241 583 aaKnown RBP16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 SYNE3Q6ZMZ3 975 aa16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 ERCC4Q92889 916 aaPredicted RBP16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 RRP9O43818 475 aaKnown RBP16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 SMC3Q9UQE7 1217 aa16.51■□□□□ 0.23
NOTCH1-201ENST00000277541 MLECQ14165 292 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 CCDC73Q6ZRK6 1079 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 TRAK2O60296 914 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 FHOD3Q2V2M9 1422 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 H0YHG0 523 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 MBD3O95983 291 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 VPS53Q5VIR6 699 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 BRPF3Q9ULD4 1205 aa16.5■□□□□ 0.23
NOTCH1-201ENST00000277541 CCDC47Q96A33 483 aaKnown RBP16.49■□□□□ 0.23
NOTCH1-201ENST00000277541 CCDC191Q8NCU4 936 aa16.49■□□□□ 0.23
NOTCH1-201ENST00000277541 TAF3Q5VWG9 929 aa16.48■□□□□ 0.23
NOTCH1-201ENST00000277541 EFCAB2Q5VUJ9 269 aa16.48■□□□□ 0.23
NOTCH1-201ENST00000277541 CPLX1O14810 134 aa16.48■□□□□ 0.23
NOTCH1-201ENST00000277541 LEKR1Q6ZMV7 388 aa16.48■□□□□ 0.23
NOTCH1-201ENST00000277541 VPS37CA5D8V6 355 aaPredicted RBP16.48■□□□□ 0.23
NOTCH1-201ENST00000277541 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.48■□□□□ 0.23
NOTCH1-201ENST00000277541 KIF7Q2M1P5 1343 aa16.47■□□□□ 0.23
NOTCH1-201ENST00000277541 AMPHP49418 695 aa16.47■□□□□ 0.23
NOTCH1-201ENST00000277541 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.46■□□□□ 0.23
NOTCH1-201ENST00000277541 TSPY26PQ9H489 355 aa16.46■□□□□ 0.23
NOTCH1-201ENST00000277541 NINLQ9Y2I6 1382 aa16.46■□□□□ 0.23
NOTCH1-201ENST00000277541 PDS5BQ9NTI5 1447 aa16.45■□□□□ 0.22
NOTCH1-201ENST00000277541 OLFM4Q6UX06 510 aa16.45■□□□□ 0.22
NOTCH1-201ENST00000277541 DHX8Q14562 1220 aaKnown RBP16.45■□□□□ 0.22
NOTCH1-201ENST00000277541 CAVIN1Q6NZI2 390 aaKnown RBP16.45■□□□□ 0.22
NOTCH1-201ENST00000277541 BRD4O60885 1362 aaPredicted RBP16.44■□□□□ 0.22
NOTCH1-201ENST00000277541 EVC2Q86UK5 1308 aa16.44■□□□□ 0.22
NOTCH1-201ENST00000277541 SMARCA4P51532 1647 aa16.44■□□□□ 0.22
NOTCH1-201ENST00000277541 KAT6BQ8WYB5 2073 aa16.44■□□□□ 0.22
NOTCH1-201ENST00000277541 CDC45O75419 566 aa16.44■□□□□ 0.22
NOTCH1-201ENST00000277541 MYO6Q9UM54 1294 aa16.44■□□□□ 0.22
NOTCH1-201ENST00000277541 API5Q9BZZ5 524 aaKnown RBP16.43■□□□□ 0.22
NOTCH1-201ENST00000277541 CCDC7Q96M83 1385 aa16.43■□□□□ 0.22
NOTCH1-201ENST00000277541 IFIT2P09913 472 aaKnown RBP16.43■□□□□ 0.22
NOTCH1-201ENST00000277541 CAGE1Q8TC20 777 aa16.43■□□□□ 0.22
NOTCH1-201ENST00000277541 FRAT2O75474 233 aaPredicted RBP16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 C9orf78Q9NZ63 289 aaPredicted RBP16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 G3V3G9 751 aa16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 DCAF8Q5TAQ9 597 aa16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 TRIM5Q9C035 493 aa16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 NEXNQ0ZGT2 675 aa16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 ERC2O15083 957 aa16.42■□□□□ 0.22
NOTCH1-201ENST00000277541 NAP1L1P55209 391 aaKnown RBP16.41■□□□□ 0.22
NOTCH1-201ENST00000277541 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
NOTCH1-201ENST00000277541 NGDNQ8NEJ9 315 aaKnown RBP16.41■□□□□ 0.22
NOTCH1-201ENST00000277541 MCM2P49736 904 aa16.41■□□□□ 0.22
NOTCH1-201ENST00000277541 TRDNQ13061 729 aa16.41■□□□□ 0.22
NOTCH1-201ENST00000277541 IL27Q8NEV9 243 aa16.4■□□□□ 0.22
NOTCH1-201ENST00000277541 KIF21BO75037 1637 aa16.4■□□□□ 0.22
NOTCH1-201ENST00000277541 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
NOTCH1-201ENST00000277541 APAF1O14727 1248 aa16.4■□□□□ 0.22
NOTCH1-201ENST00000277541 FBXW7Q969H0 707 aa16.39■□□□□ 0.22
NOTCH1-201ENST00000277541 MIA2Q96PC5 1412 aa16.39■□□□□ 0.22
NOTCH1-201ENST00000277541 SAFBQ15424 915 aaKnown RBP eCLIP16.39■□□□□ 0.21
NOTCH1-201ENST00000277541 AMOTL1Q8IY63 956 aa16.39■□□□□ 0.21
NOTCH1-201ENST00000277541 PDCP20941 246 aa16.38■□□□□ 0.21
NOTCH1-201ENST00000277541 PSMA5P28066 241 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms