RNA–Protein interactions for RNA: ENST00000275493.6

EGFR-201, Transcript of epidermal growth factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EGFR, Length 9,821 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-201ENST00000275493 NLRP2Q9NX02 1062 aa13.54□□□□□ -0.24
EGFR-201ENST00000275493 SAMD1Q6SPF0 538 aaPredicted RBP13.54□□□□□ -0.24
EGFR-201ENST00000275493 WWC1Q8IX03 1113 aa13.54□□□□□ -0.24
EGFR-201ENST00000275493 ATAD2BQ9ULI0 1458 aa13.54□□□□□ -0.24
EGFR-201ENST00000275493 DIAPH1O60610 1272 aaKnown RBP13.54□□□□□ -0.24
EGFR-201ENST00000275493 ST20-MTHFSA0A0A6YYL1 179 aa13.53□□□□□ -0.24
EGFR-201ENST00000275493 FOXD4L5Q5VV16 416 aaPredicted RBP13.53□□□□□ -0.24
EGFR-201ENST00000275493 FOXD4L4Q8WXT5 416 aaPredicted RBP13.53□□□□□ -0.24
EGFR-201ENST00000275493 IFIT2P09913 472 aaKnown RBP13.53□□□□□ -0.24
EGFR-201ENST00000275493 TRIM29Q14134 588 aa13.52□□□□□ -0.24
EGFR-201ENST00000275493 CCDC43Q96MW1 224 aaKnown RBP13.52□□□□□ -0.24
EGFR-201ENST00000275493 SMARCA4P51532 1647 aa13.52□□□□□ -0.25
EGFR-201ENST00000275493 NUTM2GQ5VZR2 741 aa13.52□□□□□ -0.25
EGFR-201ENST00000275493 PDE3BQ13370 1112 aa13.52□□□□□ -0.25
EGFR-201ENST00000275493 GAPVD1Q14C86 1478 aa13.51□□□□□ -0.25
EGFR-201ENST00000275493 ANKRD45Q5TZF3 282 aa13.51□□□□□ -0.25
EGFR-201ENST00000275493 PHF14O94880 888 aa13.51□□□□□ -0.25
EGFR-201ENST00000275493 PPP1R1BQ9UD71 204 aaPredicted RBP13.51□□□□□ -0.25
EGFR-201ENST00000275493 MCTP1Q6DN14 999 aa13.51□□□□□ -0.25
EGFR-201ENST00000275493 TSR1Q2NL82 804 aaKnown RBP13.5□□□□□ -0.25
EGFR-201ENST00000275493 BCL2L13Q9BXK5 485 aa13.5□□□□□ -0.25
EGFR-201ENST00000275493 ZKSCAN2Q63HK3 967 aa13.5□□□□□ -0.25
EGFR-201ENST00000275493 DHX57Q6P158 1386 aaKnown RBP13.5□□□□□ -0.25
EGFR-201ENST00000275493 G3BP1Q13283 466 aaKnown RBP eCLIP13.5□□□□□ -0.25
EGFR-201ENST00000275493 RUFY2Q8WXA3 655 aa13.5□□□□□ -0.25
EGFR-201ENST00000275493 GPRASP1Q5JY77 1395 aa13.5□□□□□ -0.25
EGFR-201ENST00000275493 MIA2Q96PC5 1412 aa13.49□□□□□ -0.25
EGFR-201ENST00000275493 NFXL1Q6ZNB6 911 aa13.49□□□□□ -0.25
EGFR-201ENST00000275493 GOLGA6L1Q8N7Z2 621 aa13.49□□□□□ -0.25
EGFR-201ENST00000275493 ERICH2A1L162 156 aa13.49□□□□□ -0.25
EGFR-201ENST00000275493 CPLX2Q6PUV4 134 aaKnown RBP13.49□□□□□ -0.25
EGFR-201ENST00000275493 ANO2Q9NQ90 1003 aa13.49□□□□□ -0.25
EGFR-201ENST00000275493 E9PSI1 815 aa13.48□□□□□ -0.25
EGFR-201ENST00000275493 USP35Q9P2H5 1018 aa13.48□□□□□ -0.25
EGFR-201ENST00000275493 TRDNQ13061 729 aa13.48□□□□□ -0.25
EGFR-201ENST00000275493 FYB1O15117 783 aa13.48□□□□□ -0.25
EGFR-201ENST00000275493 ROCK1Q13464 1354 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 FKBP5Q13451 457 aaPredicted RBP13.47□□□□□ -0.25
EGFR-201ENST00000275493 TSPYL4Q9UJ04 414 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 ARHGAP5Q13017 1502 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 RIC3Q7Z5B4 369 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 CCDC47Q96A33 483 aaKnown RBP13.47□□□□□ -0.25
EGFR-201ENST00000275493 RIPK4P57078 832 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 CCDC27Q2M243 656 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 CPLX1O14810 134 aa13.47□□□□□ -0.25
EGFR-201ENST00000275493 PROSER2Q86WR7 435 aaPredicted RBP13.47□□□□□ -0.25
EGFR-201ENST00000275493 USP47Q96K76 1375 aa13.46□□□□□ -0.25
EGFR-201ENST00000275493 NUTM2BA6NNL0 878 aaPredicted RBP13.46□□□□□ -0.26
EGFR-201ENST00000275493 NUTM2EB1AL46 878 aaPredicted RBP13.46□□□□□ -0.26
EGFR-201ENST00000275493 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.26
EGFR-201ENST00000275493 NUTM2AQ8IVF1 878 aaPredicted RBP13.46□□□□□ -0.26
EGFR-201ENST00000275493 TPM1P09493 284 aa13.45□□□□□ -0.26
EGFR-201ENST00000275493 PCMTD1Q96MG8 357 aaPredicted RBP13.45□□□□□ -0.26
EGFR-201ENST00000275493 STRN4Q9NRL3 753 aa13.45□□□□□ -0.26
EGFR-201ENST00000275493 ZKSCAN1P17029 563 aaPredicted RBP13.45□□□□□ -0.26
EGFR-201ENST00000275493 SMG6Q86US8 1419 aaKnown RBP13.44□□□□□ -0.26
EGFR-201ENST00000275493 FGD5Q6ZNL6 1462 aa13.44□□□□□ -0.26
EGFR-201ENST00000275493 KIF6Q6ZMV9 814 aa13.44□□□□□ -0.26
EGFR-201ENST00000275493 ATP6V1DQ9Y5K8 247 aa13.44□□□□□ -0.26
EGFR-201ENST00000275493 GOLGA6L3A6NEY3 463 aa13.43□□□□□ -0.26
EGFR-201ENST00000275493 CCAR1Q8IX12 1150 aaKnown RBP13.43□□□□□ -0.26
EGFR-201ENST00000275493 RBM42Q9BTD8 480 aaKnown RBP13.43□□□□□ -0.26
EGFR-201ENST00000275493 API5Q9BZZ5 524 aaKnown RBP13.43□□□□□ -0.26
EGFR-201ENST00000275493 NLRP6P59044 892 aa13.43□□□□□ -0.26
EGFR-201ENST00000275493 MYOM3Q5VTT5 1437 aa13.43□□□□□ -0.26
EGFR-201ENST00000275493 NEUROD6Q96NK8 337 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 PLIN1O60240 522 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 HMOX1P09601 288 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 RAD54L2Q9Y4B4 1467 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 FAM177BA6PVY3 158 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 ABTB2Q8N961 1025 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 RNF20Q5VTR2 975 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 CUX1P39880 1505 aa13.42□□□□□ -0.26
EGFR-201ENST00000275493 PIP4K2BP78356 416 aa13.41□□□□□ -0.26
EGFR-201ENST00000275493 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
EGFR-201ENST00000275493 CABP2Q9NPB3 220 aa13.41□□□□□ -0.26
EGFR-201ENST00000275493 GOLGA6L19H0YKK7 550 aa13.41□□□□□ -0.26
EGFR-201ENST00000275493 TXNDC2Q86VQ3 553 aa13.41□□□□□ -0.26
EGFR-201ENST00000275493 AQRO60306 1485 aaKnown RBP eCLIP13.4□□□□□ -0.266e-7■■■□□ 15.2
EGFR-201ENST00000275493 FOXD4L6Q3SYB3 417 aaPredicted RBP13.4□□□□□ -0.26
EGFR-201ENST00000275493 FOXD4L3Q6VB84 417 aaPredicted RBP13.4□□□□□ -0.26
EGFR-201ENST00000275493 ARID3AQ99856 593 aa13.4□□□□□ -0.26
EGFR-201ENST00000275493 DDX19BQ9UMR2 479 aa13.4□□□□□ -0.26
EGFR-201ENST00000275493 WASHC4Q2M389 1173 aa13.4□□□□□ -0.26
EGFR-201ENST00000275493 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
EGFR-201ENST00000275493 GNAI1P63096 354 aa13.39□□□□□ -0.27
EGFR-201ENST00000275493 ANKRD20A12PQ8NF67 263 aa13.39□□□□□ -0.27
EGFR-201ENST00000275493 HOOK1Q9UJC3 728 aaKnown RBP13.39□□□□□ -0.27
EGFR-201ENST00000275493 BECN2A8MW95 431 aa13.39□□□□□ -0.27
EGFR-201ENST00000275493 ERC2O15083 957 aa13.39□□□□□ -0.27
EGFR-201ENST00000275493 REC8O95072 547 aa13.39□□□□□ -0.27
EGFR-201ENST00000275493 CENPQQ7L2Z9 268 aaPredicted RBP13.38□□□□□ -0.27
EGFR-201ENST00000275493 R3HCC1Q9Y3T6 440 aaKnown RBP13.38□□□□□ -0.27
EGFR-201ENST00000275493 FBXO3Q9UK99 471 aa13.38□□□□□ -0.27
EGFR-201ENST00000275493 MTMR7Q9Y216 660 aa13.38□□□□□ -0.27
EGFR-201ENST00000275493 APAF1O14727 1248 aa13.38□□□□□ -0.27
EGFR-201ENST00000275493 RUNDC1Q96C34 613 aa13.37□□□□□ -0.27
EGFR-201ENST00000275493 COG6Q9Y2V7 657 aa13.37□□□□□ -0.27
EGFR-201ENST00000275493 DDX11L8A8MPP1 907 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms