RNA–Protein interactions for RNA: ENST00000273027.6

CPNE9-201, Transcript of copine family member 9, humanhuman

TSL 3

Gene CPNE9, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE9-201ENST00000273027 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.19
CPNE9-201ENST00000273027 RALGAPBQ86X10 1494 aa13.82□□□□□ -0.2
CPNE9-201ENST00000273027 PRKRIP1Q9H875 184 aaPredicted RBP13.82□□□□□ -0.2
CPNE9-201ENST00000273027 TSHZ2Q9NRE2 1034 aa13.81□□□□□ -0.2
CPNE9-201ENST00000273027 CCDC141Q6ZP82 1450 aa13.8□□□□□ -0.2
CPNE9-201ENST00000273027 LRRC7Q96NW7 1537 aa13.8□□□□□ -0.2
CPNE9-201ENST00000273027 HNRNPUQ00839 825 aaKnown RBP eCLIP13.79□□□□□ -0.2
CPNE9-201ENST00000273027 NBPF8Q3BBV2 869 aa13.79□□□□□ -0.2
CPNE9-201ENST00000273027 POTEAQ6S8J7 498 aa13.79□□□□□ -0.2
CPNE9-201ENST00000273027 ZBED9Q6R2W3 1325 aa13.79□□□□□ -0.2
CPNE9-201ENST00000273027 MED14O60244 1454 aa13.79□□□□□ -0.2
CPNE9-201ENST00000273027 UGGT1Q9NYU2 1555 aa13.79□□□□□ -0.2
CPNE9-201ENST00000273027 LAMC1P11047 1609 aa13.77□□□□□ -0.21
CPNE9-201ENST00000273027 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.21
CPNE9-201ENST00000273027 NLRP1Q9C000 1473 aa13.77□□□□□ -0.21
CPNE9-201ENST00000273027 ZC3H13Q5T200 1668 aaKnown RBP13.76□□□□□ -0.21
CPNE9-201ENST00000273027 UNC13BO14795 1591 aa13.76□□□□□ -0.21
CPNE9-201ENST00000273027 DEPDC5O75140 1603 aa13.75□□□□□ -0.21
CPNE9-201ENST00000273027 RNF17Q9BXT8 1623 aaKnown RBP13.75□□□□□ -0.21
CPNE9-201ENST00000273027 STRCP1A6NGW2 1772 aa13.75□□□□□ -0.21
CPNE9-201ENST00000273027 IQGAP1P46940 1657 aa13.75□□□□□ -0.21
CPNE9-201ENST00000273027 EIF2AK4Q9P2K8 1649 aaKnown RBP13.75□□□□□ -0.21
CPNE9-201ENST00000273027 NUP155O75694 1391 aa13.74□□□□□ -0.21
CPNE9-201ENST00000273027 USP47Q96K76 1375 aa13.74□□□□□ -0.21
CPNE9-201ENST00000273027 KIF15Q9NS87 1388 aa13.73□□□□□ -0.21
CPNE9-201ENST00000273027 FOXD1Q16676 465 aa13.72□□□□□ -0.21
CPNE9-201ENST00000273027 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
CPNE9-201ENST00000273027 MRS2Q9HD23 443 aa13.72□□□□□ -0.21
CPNE9-201ENST00000273027 IQGAP3Q86VI3 1631 aa13.71□□□□□ -0.22
CPNE9-201ENST00000273027 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
CPNE9-201ENST00000273027 LTKP29376 864 aa13.7□□□□□ -0.22
CPNE9-201ENST00000273027 STAC3Q96MF2 364 aa13.7□□□□□ -0.22
CPNE9-201ENST00000273027 PPP4R2Q9NY27 417 aa13.7□□□□□ -0.22
CPNE9-201ENST00000273027 DUOX2Q9NRD8 1548 aa13.69□□□□□ -0.22
CPNE9-201ENST00000273027 E9PCH4 1651 aa13.69□□□□□ -0.22
CPNE9-201ENST00000273027 TRPM1Q7Z4N2 1603 aa13.68□□□□□ -0.22
CPNE9-201ENST00000273027 FAM135BQ49AJ0 1406 aa13.68□□□□□ -0.22
CPNE9-201ENST00000273027 EID1Q9Y6B2 187 aa13.68□□□□□ -0.22
CPNE9-201ENST00000273027 INSRP06213 1382 aa13.68□□□□□ -0.22
CPNE9-201ENST00000273027 SYNMO15061 1565 aa13.67□□□□□ -0.22
CPNE9-201ENST00000273027 RALBP1Q15311 655 aa13.67□□□□□ -0.22
CPNE9-201ENST00000273027 MROH1Q8NDA8 1641 aa13.67□□□□□ -0.22
CPNE9-201ENST00000273027 CEP152O94986 1710 aa13.67□□□□□ -0.22
CPNE9-201ENST00000273027 CFAP65Q6ZU64 1925 aaKnown RBP13.66□□□□□ -0.22
CPNE9-201ENST00000273027 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
CPNE9-201ENST00000273027 ERBINQ96RT1 1412 aa13.66□□□□□ -0.22
CPNE9-201ENST00000273027 ABCC3O15438 1527 aa13.66□□□□□ -0.22
CPNE9-201ENST00000273027 RBM33Q96EV2 1170 aaKnown RBP13.66□□□□□ -0.22
CPNE9-201ENST00000273027 BRD4O60885 1362 aaPredicted RBP13.66□□□□□ -0.22
CPNE9-201ENST00000273027 SCAF11Q99590 1463 aaKnown RBP13.66□□□□□ -0.22
CPNE9-201ENST00000273027 CCDC144AA2RUR9 1427 aa13.65□□□□□ -0.22
CPNE9-201ENST00000273027 PROSER2Q86WR7 435 aaPredicted RBP13.65□□□□□ -0.22
CPNE9-201ENST00000273027 GPRASP1Q5JY77 1395 aa13.65□□□□□ -0.22
CPNE9-201ENST00000273027 ERVK-7P63135 1459 aa13.64□□□□□ -0.23
CPNE9-201ENST00000273027 CARD11Q9BXL7 1154 aa13.64□□□□□ -0.23
CPNE9-201ENST00000273027 UBR1Q8IWV7 1749 aa13.64□□□□□ -0.23
CPNE9-201ENST00000273027 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
CPNE9-201ENST00000273027 BCANQ96GW7 911 aa13.63□□□□□ -0.23
CPNE9-201ENST00000273027 STAG3Q9UJ98 1225 aa13.63□□□□□ -0.23
CPNE9-201ENST00000273027 XIRP1Q702N8 1843 aaKnown RBP13.62□□□□□ -0.23
CPNE9-201ENST00000273027 PRDM15P57071 1507 aaPredicted RBP13.61□□□□□ -0.23
CPNE9-201ENST00000273027 KCNA6P17658 529 aa13.61□□□□□ -0.23
CPNE9-201ENST00000273027 FAM9BQ8IZU0 186 aa13.61□□□□□ -0.23
CPNE9-201ENST00000273027 SLC26A8Q96RN1 970 aa13.61□□□□□ -0.23
CPNE9-201ENST00000273027 ANP32EQ9BTT0 268 aa13.61□□□□□ -0.23
CPNE9-201ENST00000273027 PRAG1Q86YV5 1406 aa13.61□□□□□ -0.23
CPNE9-201ENST00000273027 FANCIQ9NVI1 1328 aa13.61□□□□□ -0.23
CPNE9-201ENST00000273027 SLC24A1O60721 1099 aa13.6□□□□□ -0.23
CPNE9-201ENST00000273027 UPF1Q92900 1129 aaKnown RBP eCLIP13.6□□□□□ -0.23
CPNE9-201ENST00000273027 RBM19Q9Y4C8 960 aaKnown RBP13.6□□□□□ -0.23
CPNE9-201ENST00000273027 MYBBP1AQ9BQG0 1328 aaKnown RBP13.6□□□□□ -0.23
CPNE9-201ENST00000273027 KDM5AP29375 1690 aaKnown RBP13.59□□□□□ -0.23
CPNE9-201ENST00000273027 SETD1AO15047 1707 aaKnown RBP13.59□□□□□ -0.23
CPNE9-201ENST00000273027 SLAIN2Q9P270 581 aa13.59□□□□□ -0.23
CPNE9-201ENST00000273027 RNF123Q5XPI4 1314 aa13.59□□□□□ -0.23
CPNE9-201ENST00000273027 LRPPRCP42704 1394 aaKnown RBP13.58□□□□□ -0.23
CPNE9-201ENST00000273027 PDE3BQ13370 1112 aa13.58□□□□□ -0.24
CPNE9-201ENST00000273027 TMC1Q8TDI8 760 aa13.58□□□□□ -0.24
CPNE9-201ENST00000273027 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.58□□□□□ -0.24
CPNE9-201ENST00000273027 NUDCQ9Y266 331 aa13.58□□□□□ -0.24
CPNE9-201ENST00000273027 ARHGAP23Q9P227 1491 aa13.58□□□□□ -0.24
CPNE9-201ENST00000273027 ROBO1Q9Y6N7 1651 aa13.57□□□□□ -0.24
CPNE9-201ENST00000273027 MEX3CQ5U5Q3 659 aaKnown RBP13.57□□□□□ -0.24
CPNE9-201ENST00000273027 DCAF11Q8TEB1 546 aa13.57□□□□□ -0.24
CPNE9-201ENST00000273027 SLIT1O75093 1534 aa13.57□□□□□ -0.24
CPNE9-201ENST00000273027 TMEM2Q9UHN6 1383 aa13.57□□□□□ -0.24
CPNE9-201ENST00000273027 ARHGAP31Q2M1Z3 1444 aa13.56□□□□□ -0.24
CPNE9-201ENST00000273027 CCDC184Q52MB2 194 aa13.56□□□□□ -0.24
CPNE9-201ENST00000273027 JCADQ9P266 1359 aa13.56□□□□□ -0.24
CPNE9-201ENST00000273027 PNISRQ8TF01 805 aaKnown RBP13.55□□□□□ -0.24
CPNE9-201ENST00000273027 ZNF772Q68DY9 489 aaPredicted RBP13.54□□□□□ -0.24
CPNE9-201ENST00000273027 MSH6P52701 1360 aa13.54□□□□□ -0.24
CPNE9-201ENST00000273027 PIK3C2BO00750 1634 aa13.53□□□□□ -0.24
CPNE9-201ENST00000273027 KIAA1210Q9ULL0 1709 aa13.53□□□□□ -0.24
CPNE9-201ENST00000273027 ST20-MTHFSA0A0A6YYL1 179 aa13.53□□□□□ -0.24
CPNE9-201ENST00000273027 IDI1Q13907 227 aa13.53□□□□□ -0.24
CPNE9-201ENST00000273027 ZNF326Q5BKZ1 582 aaKnown RBP13.53□□□□□ -0.24
CPNE9-201ENST00000273027 NLRP13Q86W25 1043 aa13.53□□□□□ -0.24
CPNE9-201ENST00000273027 PARD3Q8TEW0 1356 aa13.52□□□□□ -0.25
CPNE9-201ENST00000273027 PHLPP1O60346 1717 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms