RNA–Protein interactions for RNA: ENST00000272371.6

OTOF-201, Transcript of otoferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene OTOF, Length 7,156 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTOF-201ENST00000272371 RILPL2Q969X0 211 aa12.88□□□□□ -0.35
OTOF-201ENST00000272371 TAF3Q5VWG9 929 aa12.88□□□□□ -0.35
OTOF-201ENST00000272371 ANKRD45Q5TZF3 282 aa12.88□□□□□ -0.35
OTOF-201ENST00000272371 STK31Q9BXU1 1019 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 ANKRD20A12PQ8NF67 263 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 SOX12O15370 315 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 CHMP4CQ96CF2 233 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 PLIN1O60240 522 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 NUCB2P80303 420 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 CCDC173Q0VFZ6 552 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 BICD2Q8TD16 824 aa12.87□□□□□ -0.35
OTOF-201ENST00000272371 HMGN5P82970 282 aaKnown RBP12.86□□□□□ -0.35
OTOF-201ENST00000272371 SLC4A10Q6U841 1118 aa12.86□□□□□ -0.35
OTOF-201ENST00000272371 CC2D2AQ9P2K1 1620 aa12.86□□□□□ -0.35
OTOF-201ENST00000272371 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
OTOF-201ENST00000272371 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
OTOF-201ENST00000272371 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
OTOF-201ENST00000272371 ZBED9Q6R2W3 1325 aa12.85□□□□□ -0.35
OTOF-201ENST00000272371 HOOK1Q9UJC3 728 aaKnown RBP12.85□□□□□ -0.35
OTOF-201ENST00000272371 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
OTOF-201ENST00000272371 TSPYL1Q9H0U9 437 aa12.84□□□□□ -0.35
OTOF-201ENST00000272371 MARCH6O60337 910 aa12.84□□□□□ -0.35
OTOF-201ENST00000272371 ATF3P18847 181 aa12.84□□□□□ -0.35
OTOF-201ENST00000272371 EFCAB2Q5VUJ9 269 aa12.84□□□□□ -0.35
OTOF-201ENST00000272371 HDAC5Q9UQL6 1122 aa12.84□□□□□ -0.35
OTOF-201ENST00000272371 SPAG9O60271 1321 aaKnown RBP12.84□□□□□ -0.35
OTOF-201ENST00000272371 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.84□□□□□ -0.35
OTOF-201ENST00000272371 SAFB2Q14151 953 aaKnown RBP eCLIP12.84□□□□□ -0.35
OTOF-201ENST00000272371 NLRP13Q86W25 1043 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 UQCRHLA0A096LP55 91 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 TRAK2O60296 914 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 UQCRHP07919 91 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 HDGFL2Q7Z4V5 671 aaPredicted RBP12.83□□□□□ -0.36
OTOF-201ENST00000272371 G3V3G9 751 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 DCAF8Q5TAQ9 597 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 PRDM2Q13029 1718 aa12.83□□□□□ -0.36
OTOF-201ENST00000272371 NUTM2DQ5VT03 806 aaPredicted RBP12.82□□□□□ -0.36
OTOF-201ENST00000272371 FBXW7Q969H0 707 aa12.82□□□□□ -0.36
OTOF-201ENST00000272371 REC8O95072 547 aa12.82□□□□□ -0.36
OTOF-201ENST00000272371 KIF15Q9NS87 1388 aa12.82□□□□□ -0.36
OTOF-201ENST00000272371 DMRT2Q9Y5R5 561 aa12.82□□□□□ -0.36
OTOF-201ENST00000272371 MAPK8IP2Q13387 824 aaPredicted RBP12.82□□□□□ -0.36
OTOF-201ENST00000272371 TOMM22Q9NS69 142 aa12.82□□□□□ -0.36
OTOF-201ENST00000272371 STK26Q9P289 416 aa12.82□□□□□ -0.36
OTOF-201ENST00000272371 CAGE1Q8TC20 777 aa12.81□□□□□ -0.36
OTOF-201ENST00000272371 CHMP4AQ9BY43 222 aa12.81□□□□□ -0.36
OTOF-201ENST00000272371 DEF6Q9H4E7 631 aa12.81□□□□□ -0.36
OTOF-201ENST00000272371 NAP1L1P55209 391 aaKnown RBP12.81□□□□□ -0.36
OTOF-201ENST00000272371 HNRNPMP52272 730 aaKnown RBP eCLIP12.81□□□□□ -0.36
OTOF-201ENST00000272371 ARHGAP35Q9NRY4 1499 aa12.8□□□□□ -0.36
OTOF-201ENST00000272371 KIAA0754O94854 1291 aa12.8□□□□□ -0.36
OTOF-201ENST00000272371 LETM1O95202 739 aaPredicted RBP12.8□□□□□ -0.36
OTOF-201ENST00000272371 USP8P40818 1118 aa12.8□□□□□ -0.36
OTOF-201ENST00000272371 VPS53Q5VIR6 699 aa12.8□□□□□ -0.36
OTOF-201ENST00000272371 RAB3GAP2Q9H2M9 1393 aa12.8□□□□□ -0.36
OTOF-201ENST00000272371 AKAP17AQ02040 695 aaKnown RBP12.8□□□□□ -0.36
OTOF-201ENST00000272371 MYBBP1AQ9BQG0 1328 aaKnown RBP12.8□□□□□ -0.36
OTOF-201ENST00000272371 RNF214Q8ND24 703 aa12.79□□□□□ -0.36
OTOF-201ENST00000272371 CGNL1Q0VF96 1302 aa12.79□□□□□ -0.36
OTOF-201ENST00000272371 NAT10Q9H0A0 1025 aaKnown RBP12.79□□□□□ -0.36
OTOF-201ENST00000272371 CCDC47Q96A33 483 aaKnown RBP12.79□□□□□ -0.36
OTOF-201ENST00000272371 ANO2Q9NQ90 1003 aa12.79□□□□□ -0.36
OTOF-201ENST00000272371 TRIM29Q14134 588 aa12.79□□□□□ -0.36
OTOF-201ENST00000272371 AXDND1Q5T1B0 1012 aaPredicted RBP12.79□□□□□ -0.36
OTOF-201ENST00000272371 TSPY26PQ9H489 355 aa12.79□□□□□ -0.36
OTOF-201ENST00000272371 CCP110O43303 1012 aa12.78□□□□□ -0.36
OTOF-201ENST00000272371 C22orf23Q9BZE7 217 aa12.78□□□□□ -0.36
OTOF-201ENST00000272371 SKIDA1Q1XH10 827 aa12.78□□□□□ -0.36
OTOF-201ENST00000272371 CAVIN1Q6NZI2 390 aaKnown RBP12.78□□□□□ -0.36
OTOF-201ENST00000272371 SMC3Q9UQE7 1217 aa12.78□□□□□ -0.36
OTOF-201ENST00000272371 PDILTQ8N807 584 aa12.77□□□□□ -0.36
OTOF-201ENST00000272371 RAPGEF2Q9Y4G8 1499 aa12.77□□□□□ -0.36
OTOF-201ENST00000272371 VPS37CA5D8V6 355 aaPredicted RBP12.77□□□□□ -0.36
OTOF-201ENST00000272371 ZKSCAN2Q63HK3 967 aa12.77□□□□□ -0.36
OTOF-201ENST00000272371 ERICH4A6NGS2 130 aa12.77□□□□□ -0.37
OTOF-201ENST00000272371 WASHC2CQ9Y4E1 1318 aa12.77□□□□□ -0.37
OTOF-201ENST00000272371 COG6Q9Y2V7 657 aa12.77□□□□□ -0.37
OTOF-201ENST00000272371 EIF3AQ14152 1382 aaKnown RBP12.76□□□□□ -0.37
OTOF-201ENST00000272371 KIF3BO15066 747 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 LMOD3Q0VAK6 560 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 RUFY2Q8WXA3 655 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 CCDC73Q6ZRK6 1079 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 WWC1Q8IX03 1113 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 ZRSR2Q15696 482 aaKnown RBP12.76□□□□□ -0.37
OTOF-201ENST00000272371 MYO6Q9UM54 1294 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 E9PSI1 815 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 TRIM5Q9C035 493 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 FMN1Q68DA7 1419 aa12.76□□□□□ -0.37
OTOF-201ENST00000272371 FHOD3Q2V2M9 1422 aa12.75□□□□□ -0.37
OTOF-201ENST00000272371 CT47B1P0C2W7 299 aaPredicted RBP12.75□□□□□ -0.37
OTOF-201ENST00000272371 SYNE3Q6ZMZ3 975 aa12.75□□□□□ -0.37
OTOF-201ENST00000272371 BCL2L13Q9BXK5 485 aa12.75□□□□□ -0.37
OTOF-201ENST00000272371 FRAT2O75474 233 aaPredicted RBP12.75□□□□□ -0.37
OTOF-201ENST00000272371 ZKSCAN1P17029 563 aaPredicted RBP12.75□□□□□ -0.37
OTOF-201ENST00000272371 OLFM4Q6UX06 510 aa12.75□□□□□ -0.37
OTOF-201ENST00000272371 ZNF330Q9Y3S2 320 aaPredicted RBP12.75□□□□□ -0.37
OTOF-201ENST00000272371 RAD54L2Q9Y4B4 1467 aa12.74□□□□□ -0.37
OTOF-201ENST00000272371 TTLL5Q6EMB2 1281 aa12.74□□□□□ -0.37
OTOF-201ENST00000272371 UBE2Q2Q8WVN8 375 aa12.74□□□□□ -0.37
OTOF-201ENST00000272371 INTS3Q68E01 1043 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms