RNA–Protein interactions for RNA: ENST00000271971.6

CAPN9-201, Transcript of calpain 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN9, Length 2,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-201ENST00000271971 WASHC2AQ641Q2 1341 aa17.56■□□□□ 0.4
CAPN9-201ENST00000271971 C11orf95C9JLR9 678 aaPredicted RBP17.56■□□□□ 0.4
CAPN9-201ENST00000271971 MIER1Q8N108 512 aa17.56■□□□□ 0.4
CAPN9-201ENST00000271971 TMEM131LA2VDJ0 1609 aa17.56■□□□□ 0.4
CAPN9-201ENST00000271971 ADGRF5Q8IZF2 1346 aa17.55■□□□□ 0.4
CAPN9-201ENST00000271971 GPRASP1Q5JY77 1395 aa17.55■□□□□ 0.4
CAPN9-201ENST00000271971 ZMYM3Q14202 1370 aa17.55■□□□□ 0.4
CAPN9-201ENST00000271971 FER1L4A9Z1Z3 1794 aa17.55■□□□□ 0.4
CAPN9-201ENST00000271971 NEXMIFQ5QGS0 1516 aa17.54■□□□□ 0.4
CAPN9-201ENST00000271971 SLC52A1Q9NWF4 448 aa17.53■□□□□ 0.4
CAPN9-201ENST00000271971 KIAA1210Q9ULL0 1709 aa17.53■□□□□ 0.4
CAPN9-201ENST00000271971 NRXN1Q9ULB1 1477 aa17.52■□□□□ 0.39
CAPN9-201ENST00000271971 NUTM2DQ5VT03 806 aaPredicted RBP17.52■□□□□ 0.39
CAPN9-201ENST00000271971 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
CAPN9-201ENST00000271971 ST20-MTHFSA0A0A6YYL1 179 aa17.51■□□□□ 0.39
CAPN9-201ENST00000271971 CCDC7Q96M83 1385 aa17.51■□□□□ 0.39
CAPN9-201ENST00000271971 STAC3Q96MF2 364 aa17.5■□□□□ 0.39
CAPN9-201ENST00000271971 KIF7Q2M1P5 1343 aa17.49■□□□□ 0.39
CAPN9-201ENST00000271971 C3P01024 1663 aa17.49■□□□□ 0.39
CAPN9-201ENST00000271971 CFAP70Q5T0N1 1121 aa17.48■□□□□ 0.39
CAPN9-201ENST00000271971 PIK3C2GO75747 1445 aa17.48■□□□□ 0.39
CAPN9-201ENST00000271971 RPGRIP1LQ68CZ1 1315 aa17.47■□□□□ 0.39
CAPN9-201ENST00000271971 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
CAPN9-201ENST00000271971 CEBPAP49715 358 aaPredicted RBP17.46■□□□□ 0.39
CAPN9-201ENST00000271971 PLPPR3Q6T4P5 718 aa17.46■□□□□ 0.39
CAPN9-201ENST00000271971 STAG3Q9UJ98 1225 aa17.45■□□□□ 0.38
CAPN9-201ENST00000271971 POLR3GLQ9BT43 218 aa17.45■□□□□ 0.38
CAPN9-201ENST00000271971 A2ML1A8K2U0 1454 aa17.44■□□□□ 0.38
CAPN9-201ENST00000271971 TNRQ92752 1358 aa17.44■□□□□ 0.38
CAPN9-201ENST00000271971 SCAF11Q99590 1463 aaKnown RBP17.43■□□□□ 0.38
CAPN9-201ENST00000271971 RIMS1Q86UR5 1692 aaKnown RBP17.42■□□□□ 0.38
CAPN9-201ENST00000271971 SETBP1Q9Y6X0 1596 aa17.41■□□□□ 0.38
CAPN9-201ENST00000271971 UBR1Q8IWV7 1749 aa17.41■□□□□ 0.38
CAPN9-201ENST00000271971 ADGRB1O14514 1584 aa17.41■□□□□ 0.38
CAPN9-201ENST00000271971 VGFO15240 615 aaPredicted RBP17.4■□□□□ 0.38
CAPN9-201ENST00000271971 TESK2Q96S53 571 aa17.39■□□□□ 0.38
CAPN9-201ENST00000271971 C14orf93Q9H972 538 aaKnown RBP17.39■□□□□ 0.37
CAPN9-201ENST00000271971 ZFYVE9O95405 1425 aa17.38■□□□□ 0.37
CAPN9-201ENST00000271971 DISP3Q9P2K9 1392 aa17.38■□□□□ 0.37
CAPN9-201ENST00000271971 TMEM132EQ6IEE7 984 aa17.38■□□□□ 0.37
CAPN9-201ENST00000271971 RIMS2Q9UQ26 1411 aa17.37■□□□□ 0.37
CAPN9-201ENST00000271971 ASXL1Q8IXJ9 1541 aa17.37■□□□□ 0.37
CAPN9-201ENST00000271971 ADAMTSL3P82987 1691 aa17.36■□□□□ 0.37
CAPN9-201ENST00000271971 KDM5AP29375 1690 aaKnown RBP17.36■□□□□ 0.37
CAPN9-201ENST00000271971 EIF3AQ14152 1382 aaKnown RBP17.35■□□□□ 0.37
CAPN9-201ENST00000271971 MYO3AQ8NEV4 1616 aa17.34■□□□□ 0.37
CAPN9-201ENST00000271971 NLRP1Q9C000 1473 aa17.33■□□□□ 0.37
CAPN9-201ENST00000271971 ARHGEF28Q8N1W1 1705 aaKnown RBP17.33■□□□□ 0.37
CAPN9-201ENST00000271971 TRAK1Q9UPV9 953 aa17.33■□□□□ 0.36
CAPN9-201ENST00000271971 ALKQ9UM73 1620 aa17.32■□□□□ 0.36
CAPN9-201ENST00000271971 ANP32CO43423 234 aa17.32■□□□□ 0.36
CAPN9-201ENST00000271971 QRICH2Q9H0J4 1663 aa17.32■□□□□ 0.36
CAPN9-201ENST00000271971 SETD1AO15047 1707 aaKnown RBP17.32■□□□□ 0.36
CAPN9-201ENST00000271971 NRXN3Q9Y4C0 1643 aa17.31■□□□□ 0.36
CAPN9-201ENST00000271971 TMF1P82094 1093 aa17.3■□□□□ 0.36
CAPN9-201ENST00000271971 PTPRMP28827 1452 aa17.29■□□□□ 0.36
CAPN9-201ENST00000271971 TMEM2Q9UHN6 1383 aa17.29■□□□□ 0.36
CAPN9-201ENST00000271971 YTHDC1Q96MU7 727 aaKnown RBP17.29■□□□□ 0.36
CAPN9-201ENST00000271971 CENPJQ9HC77 1338 aaPredicted RBP17.27■□□□□ 0.36
CAPN9-201ENST00000271971 STK26Q9P289 416 aa17.26■□□□□ 0.35
CAPN9-201ENST00000271971 MYOM1P52179 1685 aa17.26■□□□□ 0.35
CAPN9-201ENST00000271971 CNGB1Q14028 1251 aaPredicted RBP17.25■□□□□ 0.35
CAPN9-201ENST00000271971 CEP170BQ9Y4F5 1589 aaPredicted RBP17.25■□□□□ 0.35
CAPN9-201ENST00000271971 YTHDC2Q9H6S0 1430 aaKnown RBP17.24■□□□□ 0.35
CAPN9-201ENST00000271971 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.24■□□□□ 0.35
CAPN9-201ENST00000271971 LTKP29376 864 aa17.23■□□□□ 0.35
CAPN9-201ENST00000271971 SAFB2Q14151 953 aaKnown RBP eCLIP17.22■□□□□ 0.35
CAPN9-201ENST00000271971 SBNO2Q9Y2G9 1366 aa17.22■□□□□ 0.35
CAPN9-201ENST00000271971 SLIT1O75093 1534 aa17.22■□□□□ 0.35
CAPN9-201ENST00000271971 ARHGAP23Q9P227 1491 aa17.21■□□□□ 0.35
CAPN9-201ENST00000271971 BCANQ96GW7 911 aa17.21■□□□□ 0.34
CAPN9-201ENST00000271971 PRKRIP1Q9H875 184 aaPredicted RBP17.21■□□□□ 0.34
CAPN9-201ENST00000271971 ZNF142P52746 1687 aaPredicted RBP17.2■□□□□ 0.34
CAPN9-201ENST00000271971 METP08581 1390 aa17.2■□□□□ 0.34
CAPN9-201ENST00000271971 HDGFP51858 240 aaKnown RBP17.2■□□□□ 0.34
CAPN9-201ENST00000271971 TXNDC2Q86VQ3 553 aa17.19■□□□□ 0.34
CAPN9-201ENST00000271971 TULP4Q9NRJ4 1543 aa17.19■□□□□ 0.34
CAPN9-201ENST00000271971 SETD1BQ9UPS6 1966 aaKnown RBP17.18■□□□□ 0.34
CAPN9-201ENST00000271971 CDCA8Q53HL2 280 aa17.18■□□□□ 0.34
CAPN9-201ENST00000271971 ADAMTS13Q76LX8 1427 aa17.18■□□□□ 0.34
CAPN9-201ENST00000271971 CCER2I3L3R5 266 aa17.17■□□□□ 0.34
CAPN9-201ENST00000271971 PRAM1Q96QH2 718 aa17.17■□□□□ 0.34
CAPN9-201ENST00000271971 PLEKHG1Q9ULL1 1385 aa17.17■□□□□ 0.34
CAPN9-201ENST00000271971 PANK3Q9H999 370 aa17.17■□□□□ 0.34
CAPN9-201ENST00000271971 THEMISQ8N1K5 641 aaPredicted RBP17.16■□□□□ 0.34
CAPN9-201ENST00000271971 EID1Q9Y6B2 187 aa17.16■□□□□ 0.34
CAPN9-201ENST00000271971 LRPPRCP42704 1394 aaKnown RBP17.15■□□□□ 0.34
CAPN9-201ENST00000271971 KNDC1Q76NI1 1749 aa17.15■□□□□ 0.34
CAPN9-201ENST00000271971 DLC1Q96QB1 1528 aa17.14■□□□□ 0.33
CAPN9-201ENST00000271971 PLEKHH1Q9ULM0 1364 aa17.14■□□□□ 0.33
CAPN9-201ENST00000271971 CCDC184Q52MB2 194 aa17.14■□□□□ 0.33
CAPN9-201ENST00000271971 POGKQ9P215 609 aa17.14■□□□□ 0.33
CAPN9-201ENST00000271971 MINK1Q8N4C8 1332 aaPredicted RBP17.14■□□□□ 0.33
CAPN9-201ENST00000271971 PER1O15534 1290 aaPredicted RBP17.13■□□□□ 0.33
CAPN9-201ENST00000271971 SLC26A8Q96RN1 970 aa17.13■□□□□ 0.33
CAPN9-201ENST00000271971 SLC24A1O60721 1099 aa17.13■□□□□ 0.33
CAPN9-201ENST00000271971 WAPLQ7Z5K2 1190 aa17.13■□□□□ 0.33
CAPN9-201ENST00000271971 MED14O60244 1454 aa17.11■□□□□ 0.33
CAPN9-201ENST00000271971 ABCC11Q96J66 1382 aa17.11■□□□□ 0.33
CAPN9-201ENST00000271971 CPS1P31327 1500 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms