RNA–Protein interactions for RNA: ENST00000268720.9

CPNE7-201, Transcript of copine 7, humanhuman

TSL 1 (best) BASIC

Gene CPNE7, Length 2,657 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE7-201ENST00000268720 KIDINS220Q9ULH0 1771 aa25.43■■□□□ 1.66
CPNE7-201ENST00000268720 NPM1P06748 294 aaKnown RBP eCLIP25.43■■□□□ 1.66
CPNE7-201ENST00000268720 SCAF11Q99590 1463 aaKnown RBP25.42■■□□□ 1.66
CPNE7-201ENST00000268720 CFAP70Q5T0N1 1121 aa25.41■■□□□ 1.66
CPNE7-201ENST00000268720 ADGRF5Q8IZF2 1346 aa25.4■■□□□ 1.66
CPNE7-201ENST00000268720 RRP1P56182 461 aaKnown RBP25.39■■□□□ 1.65
CPNE7-201ENST00000268720 STAC3Q96MF2 364 aa25.39■■□□□ 1.65
CPNE7-201ENST00000268720 RCAN3Q9UKA8 241 aa25.39■■□□□ 1.65
CPNE7-201ENST00000268720 ZNF518AQ6AHZ1 1483 aa25.38■■□□□ 1.65
CPNE7-201ENST00000268720 CD109Q6YHK3 1445 aa25.36■■□□□ 1.65
CPNE7-201ENST00000268720 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
CPNE7-201ENST00000268720 NOP58Q9Y2X3 529 aaKnown RBP25.35■■□□□ 1.65
CPNE7-201ENST00000268720 EFCAB6Q5THR3 1501 aa25.35■■□□□ 1.65
CPNE7-201ENST00000268720 PPRC1Q5VV67 1664 aaKnown RBP25.34■■□□□ 1.65
CPNE7-201ENST00000268720 GGT6Q6P531 493 aa25.34■■□□□ 1.65
CPNE7-201ENST00000268720 AMER1Q5JTC6 1135 aaPredicted RBP25.33■■□□□ 1.65
CPNE7-201ENST00000268720 C20orf194Q5TEA3 1177 aa25.31■■□□□ 1.64
CPNE7-201ENST00000268720 CHGAP10645 457 aaKnown RBP25.31■■□□□ 1.64
CPNE7-201ENST00000268720 MAP3K4Q9Y6R4 1608 aa25.3■■□□□ 1.64
CPNE7-201ENST00000268720 ADAMTS8Q9UP79 889 aa25.3■■□□□ 1.64
CPNE7-201ENST00000268720 PPP2R1AP30153 589 aa25.29■■□□□ 1.64
CPNE7-201ENST00000268720 CDCA8Q53HL2 280 aa25.29■■□□□ 1.64
CPNE7-201ENST00000268720 POGZQ7Z3K3 1410 aa25.29■■□□□ 1.64
CPNE7-201ENST00000268720 CCDC146Q8IYE0 955 aa25.29■■□□□ 1.64
CPNE7-201ENST00000268720 ABCA6Q8N139 1617 aa25.28■■□□□ 1.64
CPNE7-201ENST00000268720 CFAP65Q6ZU64 1925 aaKnown RBP25.28■■□□□ 1.64
CPNE7-201ENST00000268720 MROH2AA6NES4 1674 aa25.28■■□□□ 1.64
CPNE7-201ENST00000268720 BLMP54132 1417 aaPredicted RBP25.27■■□□□ 1.64
CPNE7-201ENST00000268720 EIF3AQ14152 1382 aaKnown RBP25.27■■□□□ 1.64
CPNE7-201ENST00000268720 RAPGEF3O95398 923 aa25.27■■□□□ 1.64
CPNE7-201ENST00000268720 FRMPD1Q5SYB0 1578 aa25.27■■□□□ 1.64
CPNE7-201ENST00000268720 KIF1BO60333 1816 aa25.26■■□□□ 1.63
CPNE7-201ENST00000268720 MYOM2P54296 1465 aa25.26■■□□□ 1.63
CPNE7-201ENST00000268720 NPATQ14207 1427 aa25.26■■□□□ 1.63
CPNE7-201ENST00000268720 SYNMO15061 1565 aa25.25■■□□□ 1.63
CPNE7-201ENST00000268720 NEURL4Q96JN8 1562 aa25.25■■□□□ 1.63
CPNE7-201ENST00000268720 MYOM1P52179 1685 aa25.24■■□□□ 1.63
CPNE7-201ENST00000268720 PDE3BQ13370 1112 aa25.24■■□□□ 1.63
CPNE7-201ENST00000268720 CRBNQ96SW2 442 aa25.24■■□□□ 1.63
CPNE7-201ENST00000268720 KIAA1210Q9ULL0 1709 aa25.24■■□□□ 1.63
CPNE7-201ENST00000268720 NOS1P29475 1434 aa25.24■■□□□ 1.63
CPNE7-201ENST00000268720 LMTK2Q8IWU2 1503 aa25.24■■□□□ 1.63
CPNE7-201ENST00000268720 DEKP35659 375 aaKnown RBP25.22■■□□□ 1.63
CPNE7-201ENST00000268720 MLH3Q9UHC1 1453 aa25.22■■□□□ 1.63
CPNE7-201ENST00000268720 ANP32AP39687 249 aaKnown RBP25.22■■□□□ 1.63
CPNE7-201ENST00000268720 ERVK-7P63135 1459 aa25.21■■□□□ 1.63
CPNE7-201ENST00000268720 ASXL1Q8IXJ9 1541 aa25.21■■□□□ 1.63
CPNE7-201ENST00000268720 IFT172Q9UG01 1749 aa25.2■■□□□ 1.63
CPNE7-201ENST00000268720 IPO9Q96P70 1041 aaKnown RBP25.19■■□□□ 1.62
CPNE7-201ENST00000268720 HECW2Q9P2P5 1572 aa25.18■■□□□ 1.62
CPNE7-201ENST00000268720 NRXN1Q9ULB1 1477 aa25.18■■□□□ 1.62
CPNE7-201ENST00000268720 TNNT2P45379 298 aaPredicted RBP25.18■■□□□ 1.62
CPNE7-201ENST00000268720 CARD14Q9BXL6 1004 aa25.18■■□□□ 1.62
CPNE7-201ENST00000268720 INSRP06213 1382 aa25.17■■□□□ 1.62
CPNE7-201ENST00000268720 ADGRB3O60242 1522 aa25.17■■□□□ 1.62
CPNE7-201ENST00000268720 TRAK1Q9UPV9 953 aa25.17■■□□□ 1.62
CPNE7-201ENST00000268720 LAS1LQ9Y4W2 734 aaKnown RBP25.17■■□□□ 1.62
CPNE7-201ENST00000268720 KDM5AP29375 1690 aaKnown RBP25.16■■□□□ 1.62
CPNE7-201ENST00000268720 TMEM132EQ6IEE7 984 aa25.16■■□□□ 1.62
CPNE7-201ENST00000268720 ZMYM4Q5VZL5 1548 aa25.16■■□□□ 1.62
CPNE7-201ENST00000268720 WDR43Q15061 677 aaKnown RBP eCLIP25.16■■□□□ 1.624e-6■□□□□ 9.3
CPNE7-201ENST00000268720 NUTM2DQ5VT03 806 aaPredicted RBP25.15■■□□□ 1.62
CPNE7-201ENST00000268720 CFAP74Q9C0B2 1584 aa25.15■■□□□ 1.62
CPNE7-201ENST00000268720 PLEKHH1Q9ULM0 1364 aa25.13■■□□□ 1.61
CPNE7-201ENST00000268720 ZBTB47Q9UFB7 747 aaPredicted RBP25.13■■□□□ 1.61
CPNE7-201ENST00000268720 ABCC3O15438 1527 aa25.11■■□□□ 1.61
CPNE7-201ENST00000268720 CENPJQ9HC77 1338 aaPredicted RBP25.11■■□□□ 1.61
CPNE7-201ENST00000268720 C14orf93Q9H972 538 aaKnown RBP25.1■■□□□ 1.61
CPNE7-201ENST00000268720 NPC1L1Q9UHC9 1359 aa25.1■■□□□ 1.61
CPNE7-201ENST00000268720 PIK3C2GO75747 1445 aa25.1■■□□□ 1.61
CPNE7-201ENST00000268720 SPINK5Q9NQ38 1064 aaPredicted RBP25.1■■□□□ 1.61
CPNE7-201ENST00000268720 PDE4AP27815 886 aa25.09■■□□□ 1.61
CPNE7-201ENST00000268720 SLC4A3P48751 1232 aa25.07■■□□□ 1.6
CPNE7-201ENST00000268720 SIGLEC1Q9BZZ2 1709 aa25.06■■□□□ 1.6
CPNE7-201ENST00000268720 PPLO60437 1756 aa25.06■■□□□ 1.6
CPNE7-201ENST00000268720 NEUROD2Q15784 382 aa25.06■■□□□ 1.6
CPNE7-201ENST00000268720 NEO1Q92859 1461 aa25.06■■□□□ 1.6
CPNE7-201ENST00000268720 SLC24A1O60721 1099 aa25.06■■□□□ 1.6
CPNE7-201ENST00000268720 DMRT2Q9Y5R5 561 aa25.06■■□□□ 1.6
CPNE7-201ENST00000268720 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
CPNE7-201ENST00000268720 SLC12A5Q9H2X9 1139 aa25.05■■□□□ 1.6
CPNE7-201ENST00000268720 ADGRB1O14514 1584 aa25.04■■□□□ 1.6
CPNE7-201ENST00000268720 MYO3AQ8NEV4 1616 aa25.04■■□□□ 1.6
CPNE7-201ENST00000268720 ZNF521Q96K83 1311 aa25.03■■□□□ 1.6
CPNE7-201ENST00000268720 SETBP1Q9Y6X0 1596 aa25.03■■□□□ 1.6
CPNE7-201ENST00000268720 APAF1O14727 1248 aa25.03■■□□□ 1.6
CPNE7-201ENST00000268720 DUSP27Q5VZP5 1158 aa25.03■■□□□ 1.6
CPNE7-201ENST00000268720 DIP2CQ9Y2E4 1556 aa25.03■■□□□ 1.6
CPNE7-201ENST00000268720 YEATS2Q9ULM3 1422 aa25.02■■□□□ 1.6
CPNE7-201ENST00000268720 CAMSAP1Q5T5Y3 1602 aa25.02■■□□□ 1.6
CPNE7-201ENST00000268720 CYB5RLQ6IPT4 315 aa25.02■■□□□ 1.6
CPNE7-201ENST00000268720 TCERG1O14776 1098 aaKnown RBP25■■□□□ 1.59
CPNE7-201ENST00000268720 IDI1Q13907 227 aa25■■□□□ 1.59
CPNE7-201ENST00000268720 RRP7AQ9Y3A4 280 aaKnown RBP24.99■■□□□ 1.59
CPNE7-201ENST00000268720 RGS3P49796 1198 aa24.99■■□□□ 1.59
CPNE7-201ENST00000268720 RPGRIP1LQ68CZ1 1315 aa24.99■■□□□ 1.59
CPNE7-201ENST00000268720 BCAR3O75815 825 aa24.99■■□□□ 1.59
CPNE7-201ENST00000268720 GOLGA2Q08379 1002 aa24.99■■□□□ 1.59
CPNE7-201ENST00000268720 NSD3Q9BZ95 1437 aa24.97■■□□□ 1.59
CPNE7-201ENST00000268720 SAFB2Q14151 953 aaKnown RBP eCLIP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms