RNA–Protein interactions for RNA: ENST00000267202.6

VPS37B-201, Transcript of VPS37B, ESCRT-I subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS37B, Length 3,028 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37B-201ENST00000267202 SLC4A3P48751 1232 aa24.02■■□□□ 1.44
VPS37B-201ENST00000267202 PLXNC1O60486 1568 aa24.02■■□□□ 1.44
VPS37B-201ENST00000267202 DUSP27Q5VZP5 1158 aa24.02■■□□□ 1.44
VPS37B-201ENST00000267202 NEUROD2Q15784 382 aa24■■□□□ 1.43
VPS37B-201ENST00000267202 ADGRF5Q8IZF2 1346 aa24■■□□□ 1.43
VPS37B-201ENST00000267202 RGS3P49796 1198 aa24■■□□□ 1.43
VPS37B-201ENST00000267202 GOLGA2Q08379 1002 aa24■■□□□ 1.43
VPS37B-201ENST00000267202 EIF2AK4Q9P2K8 1649 aaKnown RBP24■■□□□ 1.43
VPS37B-201ENST00000267202 ATP10AO60312 1499 aa23.99■■□□□ 1.43
VPS37B-201ENST00000267202 ZCCHC11Q5TAX3 1644 aaKnown RBP23.98■■□□□ 1.43
VPS37B-201ENST00000267202 SCAPERQ9BY12 1400 aa23.98■■□□□ 1.43
VPS37B-201ENST00000267202 UGGT1Q9NYU2 1555 aa23.98■■□□□ 1.43
VPS37B-201ENST00000267202 NUTM2DQ5VT03 806 aaPredicted RBP23.97■■□□□ 1.43
VPS37B-201ENST00000267202 DMRT2Q9Y5R5 561 aa23.97■■□□□ 1.43
VPS37B-201ENST00000267202 BCAR3O75815 825 aa23.96■■□□□ 1.43
VPS37B-201ENST00000267202 ZMYM4Q5VZL5 1548 aa23.96■■□□□ 1.43
VPS37B-201ENST00000267202 CDCA8Q53HL2 280 aa23.95■■□□□ 1.42
VPS37B-201ENST00000267202 ABCC1P33527 1531 aa23.95■■□□□ 1.42
VPS37B-201ENST00000267202 CARD14Q9BXL6 1004 aa23.93■■□□□ 1.42
VPS37B-201ENST00000267202 TRAK1Q9UPV9 953 aa23.93■■□□□ 1.42
VPS37B-201ENST00000267202 RRP7AQ9Y3A4 280 aaKnown RBP23.93■■□□□ 1.42
VPS37B-201ENST00000267202 SHROOM2Q13796 1616 aa23.93■■□□□ 1.42
VPS37B-201ENST00000267202 MADDQ8WXG6 1647 aa23.93■■□□□ 1.42
VPS37B-201ENST00000267202 SCAF11Q99590 1463 aaKnown RBP23.93■■□□□ 1.42
VPS37B-201ENST00000267202 NEFMP07197 916 aa23.92■■□□□ 1.42
VPS37B-201ENST00000267202 CLTCL1P53675 1640 aa23.92■■□□□ 1.42
VPS37B-201ENST00000267202 LAMC1P11047 1609 aa23.91■■□□□ 1.42
VPS37B-201ENST00000267202 KANK1Q14678 1352 aa23.9■■□□□ 1.42
VPS37B-201ENST00000267202 TMEM132EQ6IEE7 984 aa23.9■■□□□ 1.42
VPS37B-201ENST00000267202 MS4A1P11836 297 aa23.89■■□□□ 1.42
VPS37B-201ENST00000267202 SLFN5Q08AF3 891 aa23.89■■□□□ 1.41
VPS37B-201ENST00000267202 CFAP65Q6ZU64 1925 aaKnown RBP23.89■■□□□ 1.41
VPS37B-201ENST00000267202 GGT6Q6P531 493 aa23.89■■□□□ 1.41
VPS37B-201ENST00000267202 RNF17Q9BXT8 1623 aaKnown RBP23.88■■□□□ 1.41
VPS37B-201ENST00000267202 ASXL1Q8IXJ9 1541 aa23.87■■□□□ 1.41
VPS37B-201ENST00000267202 ZNF521Q96K83 1311 aa23.85■■□□□ 1.41
VPS37B-201ENST00000267202 SLC12A5Q9H2X9 1139 aa23.85■■□□□ 1.41
VPS37B-201ENST00000267202 ZFYVE16Q7Z3T8 1539 aa23.85■■□□□ 1.41
VPS37B-201ENST00000267202 SAFB2Q14151 953 aaKnown RBP eCLIP23.84■■□□□ 1.41
VPS37B-201ENST00000267202 FANCAO15360 1455 aa23.84■■□□□ 1.41
VPS37B-201ENST00000267202 TRPM2O94759 1503 aa23.84■■□□□ 1.41
VPS37B-201ENST00000267202 FRAT1Q92837 279 aaPredicted RBP23.84■■□□□ 1.41
VPS37B-201ENST00000267202 IQGAP1P46940 1657 aa23.83■■□□□ 1.41
VPS37B-201ENST00000267202 EIF3AQ14152 1382 aaKnown RBP23.83■■□□□ 1.41
VPS37B-201ENST00000267202 CANXP27824 592 aaKnown RBP23.83■■□□□ 1.41
VPS37B-201ENST00000267202 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.83■■□□□ 1.4
VPS37B-201ENST00000267202 KDM2BQ8NHM5 1336 aa23.82■■□□□ 1.4
VPS37B-201ENST00000267202 SPHKAPQ2M3C7 1700 aa23.82■■□□□ 1.4
VPS37B-201ENST00000267202 BCL2L13Q9BXK5 485 aa23.81■■□□□ 1.4
VPS37B-201ENST00000267202 CENPQQ7L2Z9 268 aaPredicted RBP23.81■■□□□ 1.4
VPS37B-201ENST00000267202 PANK1Q8TE04 598 aa23.81■■□□□ 1.4
VPS37B-201ENST00000267202 PTPRTO14522 1441 aa23.8■■□□□ 1.4
VPS37B-201ENST00000267202 MORC1Q86VD1 984 aa23.79■■□□□ 1.4
VPS37B-201ENST00000267202 ADGRL1O94910 1474 aa23.79■■□□□ 1.4
VPS37B-201ENST00000267202 COG6Q9Y2V7 657 aa23.78■■□□□ 1.4
VPS37B-201ENST00000267202 ATP7AQ04656 1500 aa23.78■■□□□ 1.4
VPS37B-201ENST00000267202 DAXXQ9UER7 740 aaPredicted RBP23.77■■□□□ 1.4
VPS37B-201ENST00000267202 ERVK-7P63135 1459 aa23.77■■□□□ 1.4
VPS37B-201ENST00000267202 SYNMO15061 1565 aa23.76■■□□□ 1.39
VPS37B-201ENST00000267202 CEP152O94986 1710 aa23.76■■□□□ 1.39
VPS37B-201ENST00000267202 IGHDP01880 384 aa23.76■■□□□ 1.39
VPS37B-201ENST00000267202 TNNQ9UQP3 1299 aa23.76■■□□□ 1.39
VPS37B-201ENST00000267202 NOS1P29475 1434 aa23.75■■□□□ 1.39
VPS37B-201ENST00000267202 RTEL1-TNFRSF6BF6WH68 1400 aa23.75■■□□□ 1.39
VPS37B-201ENST00000267202 PIK3C2GO75747 1445 aa23.75■■□□□ 1.39
VPS37B-201ENST00000267202 MYOM1P52179 1685 aa23.74■■□□□ 1.39
VPS37B-201ENST00000267202 CENPJQ9HC77 1338 aaPredicted RBP23.74■■□□□ 1.39
VPS37B-201ENST00000267202 INSRP06213 1382 aa23.74■■□□□ 1.39
VPS37B-201ENST00000267202 C8orf34Q49A92 452 aa23.73■■□□□ 1.39
VPS37B-201ENST00000267202 BRPF3Q9ULD4 1205 aa23.73■■□□□ 1.39
VPS37B-201ENST00000267202 E9PSI1 815 aa23.72■■□□□ 1.39
VPS37B-201ENST00000267202 CLUAP1Q96AJ1 413 aa23.72■■□□□ 1.39
VPS37B-201ENST00000267202 NSD3Q9BZ95 1437 aa23.71■■□□□ 1.39
VPS37B-201ENST00000267202 FAM161AQ3B820 660 aa23.71■■□□□ 1.39
VPS37B-201ENST00000267202 WWC1Q8IX03 1113 aa23.71■■□□□ 1.39
VPS37B-201ENST00000267202 KDM5AP29375 1690 aaKnown RBP23.71■■□□□ 1.39
VPS37B-201ENST00000267202 NKTRP30414 1462 aaKnown RBP23.7■■□□□ 1.38
VPS37B-201ENST00000267202 TET3O43151 1660 aa23.7■■□□□ 1.38
VPS37B-201ENST00000267202 UHRF1BP1LA0JNW5 1464 aa23.7■■□□□ 1.38
VPS37B-201ENST00000267202 TRMT2AQ8IZ69 625 aaKnown RBP23.7■■□□□ 1.38
VPS37B-201ENST00000267202 EIF5BO60841 1220 aaKnown RBP23.69■■□□□ 1.38
VPS37B-201ENST00000267202 STK26Q9P289 416 aa23.69■■□□□ 1.38
VPS37B-201ENST00000267202 ABCA6Q8N139 1617 aa23.69■■□□□ 1.38
VPS37B-201ENST00000267202 MTHFSP49914 203 aa23.68■■□□□ 1.38
VPS37B-201ENST00000267202 DDRGK1Q96HY6 314 aa23.68■■□□□ 1.38
VPS37B-201ENST00000267202 CLASP1Q7Z460 1538 aa23.68■■□□□ 1.38
VPS37B-201ENST00000267202 TCP11L2Q8N4U5 519 aa23.68■■□□□ 1.38
VPS37B-201ENST00000267202 STAC3Q96MF2 364 aa23.67■■□□□ 1.38
VPS37B-201ENST00000267202 CABP2Q9NPB3 220 aa23.65■■□□□ 1.38
VPS37B-201ENST00000267202 ASXL2Q76L83 1435 aa23.65■■□□□ 1.38
VPS37B-201ENST00000267202 MAP3K4Q9Y6R4 1608 aa23.64■■□□□ 1.38
VPS37B-201ENST00000267202 PPM1GO15355 546 aaPredicted RBP23.63■■□□□ 1.37
VPS37B-201ENST00000267202 MROH2AA6NES4 1674 aa23.63■■□□□ 1.37
VPS37B-201ENST00000267202 RAPGEF3O95398 923 aa23.62■■□□□ 1.37
VPS37B-201ENST00000267202 DEPDC5O75140 1603 aa23.62■■□□□ 1.37
VPS37B-201ENST00000267202 NPC1L1Q9UHC9 1359 aa23.62■■□□□ 1.37
VPS37B-201ENST00000267202 U2AF1L5P0DN76 240 aaPredicted RBP23.62■■□□□ 1.37
VPS37B-201ENST00000267202 U2AF1Q01081 240 aaKnown RBP eCLIP23.62■■□□□ 1.37
VPS37B-201ENST00000267202 SEC24BO95487 1268 aa23.61■■□□□ 1.37
VPS37B-201ENST00000267202 NFKBIBQ15653 356 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms