RNA–Protein interactions for RNA: ENST00000266542.8

C1RL-201, Transcript of complement C1r subcomponent like, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C1RL, Length 3,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-201ENST00000266542 SYNMO15061 1565 aa16.99■□□□□ 0.31
C1RL-201ENST00000266542 IQGAP1P46940 1657 aa16.99■□□□□ 0.31
C1RL-201ENST00000266542 FRAT1Q92837 279 aaPredicted RBP16.99■□□□□ 0.31
C1RL-201ENST00000266542 RTN4Q9NQC3 1192 aaKnown RBP16.99■□□□□ 0.31
C1RL-201ENST00000266542 WDR43Q15061 677 aaKnown RBP eCLIP16.98■□□□□ 0.31
C1RL-201ENST00000266542 SLC4A3P48751 1232 aa16.97■□□□□ 0.31
C1RL-201ENST00000266542 BRPF3Q9ULD4 1205 aa16.97■□□□□ 0.31
C1RL-201ENST00000266542 KNSTRNQ9Y448 316 aa16.97■□□□□ 0.31
C1RL-201ENST00000266542 ABCC2Q92887 1545 aa16.97■□□□□ 0.31
C1RL-201ENST00000266542 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
C1RL-201ENST00000266542 ASXL1Q8IXJ9 1541 aa16.96■□□□□ 0.31
C1RL-201ENST00000266542 DUOX2Q9NRD8 1548 aa16.96■□□□□ 0.31
C1RL-201ENST00000266542 CDCA8Q53HL2 280 aa16.95■□□□□ 0.3
C1RL-201ENST00000266542 MADDQ8WXG6 1647 aa16.95■□□□□ 0.3
C1RL-201ENST00000266542 STAC3Q96MF2 364 aa16.95■□□□□ 0.3
C1RL-201ENST00000266542 NGEFQ8N5V2 710 aa16.94■□□□□ 0.3
C1RL-201ENST00000266542 NKTRP30414 1462 aaKnown RBP16.94■□□□□ 0.3
C1RL-201ENST00000266542 VIRMAQ69YN4 1812 aaKnown RBP16.94■□□□□ 0.3
C1RL-201ENST00000266542 SCAPERQ9BY12 1400 aa16.94■□□□□ 0.3
C1RL-201ENST00000266542 ERCC6Q03468 1493 aa16.92■□□□□ 0.3
C1RL-201ENST00000266542 SCAF11Q99590 1463 aaKnown RBP16.91■□□□□ 0.3
C1RL-201ENST00000266542 FRAT2O75474 233 aaPredicted RBP16.9■□□□□ 0.3
C1RL-201ENST00000266542 FBLN2P98095 1184 aa16.9■□□□□ 0.3
C1RL-201ENST00000266542 USP19O94966 1318 aa16.9■□□□□ 0.3
C1RL-201ENST00000266542 MYOM1P52179 1685 aa16.9■□□□□ 0.3
C1RL-201ENST00000266542 NINLQ9Y2I6 1382 aa16.9■□□□□ 0.3
C1RL-201ENST00000266542 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.9■□□□□ 0.3
C1RL-201ENST00000266542 ARHGAP5Q13017 1502 aa16.9■□□□□ 0.3
C1RL-201ENST00000266542 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.89■□□□□ 0.29
C1RL-201ENST00000266542 E9PSI1 815 aa16.89■□□□□ 0.29
C1RL-201ENST00000266542 TTC37Q6PGP7 1564 aa16.89■□□□□ 0.29
C1RL-201ENST00000266542 PDE3AQ14432 1141 aa16.89■□□□□ 0.29
C1RL-201ENST00000266542 SPHKAPQ2M3C7 1700 aa16.88■□□□□ 0.29
C1RL-201ENST00000266542 RGS3P49796 1198 aa16.87■□□□□ 0.29
C1RL-201ENST00000266542 SPINK5Q9NQ38 1064 aaPredicted RBP16.87■□□□□ 0.29
C1RL-201ENST00000266542 CGNL1Q0VF96 1302 aa16.87■□□□□ 0.29
C1RL-201ENST00000266542 MAPK8IP3Q9UPT6 1336 aa16.86■□□□□ 0.29
C1RL-201ENST00000266542 ZMYM3Q14202 1370 aa16.86■□□□□ 0.29
C1RL-201ENST00000266542 TRPM2O94759 1503 aa16.85■□□□□ 0.29
C1RL-201ENST00000266542 IGHDP01880 384 aa16.85■□□□□ 0.29
C1RL-201ENST00000266542 FAM43AQ8N2R8 423 aa16.85■□□□□ 0.29
C1RL-201ENST00000266542 KIAA1210Q9ULL0 1709 aa16.85■□□□□ 0.29
C1RL-201ENST00000266542 PTPRTO14522 1441 aa16.84■□□□□ 0.29
C1RL-201ENST00000266542 BCAR3O75815 825 aa16.84■□□□□ 0.29
C1RL-201ENST00000266542 APAF1O14727 1248 aa16.84■□□□□ 0.29
C1RL-201ENST00000266542 CEP152O94986 1710 aa16.83■□□□□ 0.29
C1RL-201ENST00000266542 SLC24A1O60721 1099 aa16.83■□□□□ 0.29
C1RL-201ENST00000266542 AAMPQ13685 434 aa16.83■□□□□ 0.29
C1RL-201ENST00000266542 NEURL4Q96JN8 1562 aa16.83■□□□□ 0.28
C1RL-201ENST00000266542 NLRP1Q9C000 1473 aa16.82■□□□□ 0.28
C1RL-201ENST00000266542 KDM5AP29375 1690 aaKnown RBP16.82■□□□□ 0.28
C1RL-201ENST00000266542 CCDC146Q8IYE0 955 aa16.81■□□□□ 0.28
C1RL-201ENST00000266542 CLUAP1Q96AJ1 413 aa16.81■□□□□ 0.28
C1RL-201ENST00000266542 BECN1Q14457 450 aa16.8■□□□□ 0.28
C1RL-201ENST00000266542 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.79■□□□□ 0.28
C1RL-201ENST00000266542 POLR3AO14802 1390 aaPredicted RBP16.79■□□□□ 0.28
C1RL-201ENST00000266542 ANTXR1Q9H6X2 564 aa16.77■□□□□ 0.28
C1RL-201ENST00000266542 CENPJQ9HC77 1338 aaPredicted RBP16.77■□□□□ 0.28
C1RL-201ENST00000266542 PLCH2O75038 1416 aa16.77■□□□□ 0.28
C1RL-201ENST00000266542 SEC24BO95487 1268 aa16.77■□□□□ 0.28
C1RL-201ENST00000266542 DMRT2Q9Y5R5 561 aa16.77■□□□□ 0.28
C1RL-201ENST00000266542 CLTCL1P53675 1640 aa16.77■□□□□ 0.27
C1RL-201ENST00000266542 RSPH6AQ9H0K4 717 aa16.76■□□□□ 0.27
C1RL-201ENST00000266542 ERVK-7P63135 1459 aa16.76■□□□□ 0.27
C1RL-201ENST00000266542 WWC1Q8IX03 1113 aa16.75■□□□□ 0.27
C1RL-201ENST00000266542 ABCC1P33527 1531 aa16.75■□□□□ 0.27
C1RL-201ENST00000266542 DEPDC5O75140 1603 aa16.75■□□□□ 0.27
C1RL-201ENST00000266542 RTEL1-TNFRSF6BF6WH68 1400 aa16.75■□□□□ 0.27
C1RL-201ENST00000266542 PMFBP1Q8TBY8 1022 aa16.74■□□□□ 0.27
C1RL-201ENST00000266542 PHF23Q9BUL5 403 aaPredicted RBP16.73■□□□□ 0.27
C1RL-201ENST00000266542 CARD14Q9BXL6 1004 aa16.73■□□□□ 0.27
C1RL-201ENST00000266542 SHROOM2Q13796 1616 aa16.73■□□□□ 0.27
C1RL-201ENST00000266542 POGKQ9P215 609 aa16.73■□□□□ 0.27
C1RL-201ENST00000266542 TET3O43151 1660 aa16.72■□□□□ 0.27
C1RL-201ENST00000266542 L1TD1Q5T7N2 865 aaKnown RBP16.72■□□□□ 0.27
C1RL-201ENST00000266542 MYOM2P54296 1465 aa16.72■□□□□ 0.27
C1RL-201ENST00000266542 TBC1D32Q96NH3 1257 aa16.72■□□□□ 0.27
C1RL-201ENST00000266542 COG6Q9Y2V7 657 aa16.72■□□□□ 0.27
C1RL-201ENST00000266542 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
C1RL-201ENST00000266542 PANK1Q8TE04 598 aa16.72■□□□□ 0.27
C1RL-201ENST00000266542 NCBP3Q53F19 620 aaKnown RBP16.71■□□□□ 0.27
C1RL-201ENST00000266542 EFCAB2Q5VUJ9 269 aa16.71■□□□□ 0.27
C1RL-201ENST00000266542 UBE2Q2Q8WVN8 375 aa16.71■□□□□ 0.27
C1RL-201ENST00000266542 VWDEQ8N2E2 1590 aa16.71■□□□□ 0.27
C1RL-201ENST00000266542 MYO3AQ8NEV4 1616 aa16.71■□□□□ 0.27
C1RL-201ENST00000266542 TRAPPC8Q9Y2L5 1435 aa16.7■□□□□ 0.26
C1RL-201ENST00000266542 KANK1Q14678 1352 aa16.7■□□□□ 0.26
C1RL-201ENST00000266542 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
C1RL-201ENST00000266542 RARSP54136 660 aaKnown RBP16.7■□□□□ 0.26
C1RL-201ENST00000266542 IQSEC2Q5JU85 1478 aa16.7■□□□□ 0.26
C1RL-201ENST00000266542 MAP3K4Q9Y6R4 1608 aa16.7■□□□□ 0.26
C1RL-201ENST00000266542 WDR63Q8IWG1 891 aa16.69■□□□□ 0.26
C1RL-201ENST00000266542 UPF2Q9HAU5 1272 aaKnown RBP16.68■□□□□ 0.26
C1RL-201ENST00000266542 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
C1RL-201ENST00000266542 PCDHB15Q9Y5E8 787 aa16.68■□□□□ 0.26
C1RL-201ENST00000266542 CCDC27Q2M243 656 aa16.67■□□□□ 0.26
C1RL-201ENST00000266542 ABCA6Q8N139 1617 aa16.67■□□□□ 0.26
C1RL-201ENST00000266542 ZFYVE16Q7Z3T8 1539 aa16.67■□□□□ 0.26
C1RL-201ENST00000266542 ARAP3Q8WWN8 1544 aa16.66■□□□□ 0.26
C1RL-201ENST00000266542 RUNDC1Q96C34 613 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms