RNA–Protein interactions for RNA: ENST00000265334.8

CDKL3-201, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CDKL3, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-201ENST00000265334 PIK3C2BO00750 1634 aa16.29■□□□□ 0.2
CDKL3-201ENST00000265334 KTN1Q86UP2 1357 aaKnown RBP16.29■□□□□ 0.2
CDKL3-201ENST00000265334 IFT172Q9UG01 1749 aa16.28■□□□□ 0.2
CDKL3-201ENST00000265334 MYOM2P54296 1465 aa16.28■□□□□ 0.2
CDKL3-201ENST00000265334 CFAP65Q6ZU64 1925 aaKnown RBP16.28■□□□□ 0.2
CDKL3-201ENST00000265334 MROH2AA6NES4 1674 aa16.27■□□□□ 0.2
CDKL3-201ENST00000265334 SYNMO15061 1565 aa16.27■□□□□ 0.2
CDKL3-201ENST00000265334 FAM9BQ8IZU0 186 aa16.27■□□□□ 0.19
CDKL3-201ENST00000265334 DISP3Q9P2K9 1392 aa16.26■□□□□ 0.19
CDKL3-201ENST00000265334 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
CDKL3-201ENST00000265334 PREX1Q8TCU6 1659 aa16.25■□□□□ 0.19
CDKL3-201ENST00000265334 FKBP8Q14318 412 aa16.24■□□□□ 0.19
CDKL3-201ENST00000265334 PER1O15534 1290 aaPredicted RBP16.24■□□□□ 0.19
CDKL3-201ENST00000265334 DNAJC5Q9H3Z4 198 aa16.24■□□□□ 0.19
CDKL3-201ENST00000265334 NRXN1Q9ULB1 1477 aa16.23■□□□□ 0.19
CDKL3-201ENST00000265334 RALBP1Q15311 655 aa16.23■□□□□ 0.19
CDKL3-201ENST00000265334 SCAF11Q99590 1463 aaKnown RBP16.22■□□□□ 0.19
CDKL3-201ENST00000265334 SLC52A1Q9NWF4 448 aa16.22■□□□□ 0.19
CDKL3-201ENST00000265334 CLTCQ00610 1675 aaKnown RBP16.21■□□□□ 0.19
CDKL3-201ENST00000265334 RPGRIP1LQ68CZ1 1315 aa16.21■□□□□ 0.19
CDKL3-201ENST00000265334 PPLO60437 1756 aa16.21■□□□□ 0.19
CDKL3-201ENST00000265334 BRD4O60885 1362 aaPredicted RBP16.21■□□□□ 0.19
CDKL3-201ENST00000265334 PARD3Q8TEW0 1356 aa16.21■□□□□ 0.19
CDKL3-201ENST00000265334 PNISRQ8TF01 805 aaKnown RBP16.21■□□□□ 0.18
CDKL3-201ENST00000265334 MYBBP1AQ9BQG0 1328 aaKnown RBP16.2■□□□□ 0.18
CDKL3-201ENST00000265334 NEFLP07196 543 aa16.2■□□□□ 0.18
CDKL3-201ENST00000265334 TMF1P82094 1093 aa16.2■□□□□ 0.18
CDKL3-201ENST00000265334 ERVK-7P63135 1459 aa16.19■□□□□ 0.18
CDKL3-201ENST00000265334 LRPPRCP42704 1394 aaKnown RBP16.18■□□□□ 0.18
CDKL3-201ENST00000265334 TRHP20396 242 aaPredicted RBP16.17■□□□□ 0.18
CDKL3-201ENST00000265334 SPATA31D1Q6ZQQ2 1576 aa16.17■□□□□ 0.18
CDKL3-201ENST00000265334 IDI1Q13907 227 aa16.16■□□□□ 0.18
CDKL3-201ENST00000265334 ADGRF5Q8IZF2 1346 aa16.16■□□□□ 0.18
CDKL3-201ENST00000265334 TMEM131LA2VDJ0 1609 aa16.15■□□□□ 0.18
CDKL3-201ENST00000265334 CHGAP10645 457 aaKnown RBP16.15■□□□□ 0.18
CDKL3-201ENST00000265334 TMC1Q8TDI8 760 aa16.15■□□□□ 0.18
CDKL3-201ENST00000265334 NEXMIFQ5QGS0 1516 aa16.15■□□□□ 0.18
CDKL3-201ENST00000265334 CNGB1Q14028 1251 aaPredicted RBP16.15■□□□□ 0.18
CDKL3-201ENST00000265334 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
CDKL3-201ENST00000265334 SETBP1Q9Y6X0 1596 aa16.14■□□□□ 0.17
CDKL3-201ENST00000265334 PANK3Q9H999 370 aa16.13■□□□□ 0.17
CDKL3-201ENST00000265334 ZFYVE9O95405 1425 aa16.13■□□□□ 0.17
CDKL3-201ENST00000265334 FBXO31Q5XUX0 539 aaPredicted RBP16.13■□□□□ 0.17
CDKL3-201ENST00000265334 MYOM1P52179 1685 aa16.12■□□□□ 0.17
CDKL3-201ENST00000265334 MLECQ14165 292 aa16.12■□□□□ 0.17
CDKL3-201ENST00000265334 NLRP13Q86W25 1043 aa16.12■□□□□ 0.17
CDKL3-201ENST00000265334 MYO3AQ8NEV4 1616 aa16.12■□□□□ 0.17
CDKL3-201ENST00000265334 EIF3AQ14152 1382 aaKnown RBP16.12■□□□□ 0.17
CDKL3-201ENST00000265334 BCANQ96GW7 911 aa16.12■□□□□ 0.17
CDKL3-201ENST00000265334 CFAP70Q5T0N1 1121 aa16.11■□□□□ 0.17
CDKL3-201ENST00000265334 MYO5BQ9ULV0 1848 aa16.11■□□□□ 0.17
CDKL3-201ENST00000265334 ZMYM3Q14202 1370 aa16.11■□□□□ 0.17
CDKL3-201ENST00000265334 SMG6Q86US8 1419 aaKnown RBP16.11■□□□□ 0.17
CDKL3-201ENST00000265334 CDCA8Q53HL2 280 aa16.1■□□□□ 0.17
CDKL3-201ENST00000265334 VGFO15240 615 aaPredicted RBP16.1■□□□□ 0.17
CDKL3-201ENST00000265334 ESF1Q9H501 851 aaKnown RBP16.09■□□□□ 0.17
CDKL3-201ENST00000265334 C14orf93Q9H972 538 aaKnown RBP16.09■□□□□ 0.17
CDKL3-201ENST00000265334 ERICH6BQ5W0A0 696 aa16.09■□□□□ 0.17
CDKL3-201ENST00000265334 KDM5AP29375 1690 aaKnown RBP16.09■□□□□ 0.17
CDKL3-201ENST00000265334 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
CDKL3-201ENST00000265334 ADGRB1O14514 1584 aa16.07■□□□□ 0.16
CDKL3-201ENST00000265334 INSRP06213 1382 aa16.07■□□□□ 0.16
CDKL3-201ENST00000265334 SBNO2Q9Y2G9 1366 aa16.07■□□□□ 0.16
CDKL3-201ENST00000265334 A2ML1A8K2U0 1454 aa16.05■□□□□ 0.16
CDKL3-201ENST00000265334 CC2D1BQ5T0F9 858 aaKnown RBP16.04■□□□□ 0.16
CDKL3-201ENST00000265334 NPC1L1Q9UHC9 1359 aa16.03■□□□□ 0.16
CDKL3-201ENST00000265334 AMER1Q5JTC6 1135 aaPredicted RBP16.03■□□□□ 0.16
CDKL3-201ENST00000265334 NUDCQ9Y266 331 aa16.03■□□□□ 0.16
CDKL3-201ENST00000265334 ASXL1Q8IXJ9 1541 aa16.02■□□□□ 0.16
CDKL3-201ENST00000265334 TNRQ92752 1358 aa16.01■□□□□ 0.15
CDKL3-201ENST00000265334 RNF123Q5XPI4 1314 aa16.01■□□□□ 0.15
CDKL3-201ENST00000265334 TSHZ2Q9NRE2 1034 aa16.01■□□□□ 0.15
CDKL3-201ENST00000265334 STAG3Q9UJ98 1225 aa16■□□□□ 0.15
CDKL3-201ENST00000265334 KNSTRNQ9Y448 316 aa16■□□□□ 0.15
CDKL3-201ENST00000265334 BLMP54132 1417 aaPredicted RBP15.99■□□□□ 0.15
CDKL3-201ENST00000265334 IRX6P78412 446 aaPredicted RBP15.99■□□□□ 0.15
CDKL3-201ENST00000265334 FER1L4A9Z1Z3 1794 aa15.99■□□□□ 0.15
CDKL3-201ENST00000265334 QRICH2Q9H0J4 1663 aa15.99■□□□□ 0.15
CDKL3-201ENST00000265334 NUTM2DQ5VT03 806 aaPredicted RBP15.98■□□□□ 0.15
CDKL3-201ENST00000265334 CENPJQ9HC77 1338 aaPredicted RBP15.98■□□□□ 0.15
CDKL3-201ENST00000265334 C3P01024 1663 aa15.97■□□□□ 0.15
CDKL3-201ENST00000265334 RIMS2Q9UQ26 1411 aa15.97■□□□□ 0.15
CDKL3-201ENST00000265334 NLRP1Q9C000 1473 aa15.96■□□□□ 0.15
CDKL3-201ENST00000265334 PPP2R1AP30153 589 aa15.96■□□□□ 0.15
CDKL3-201ENST00000265334 UBR1Q8IWV7 1749 aa15.96■□□□□ 0.14
CDKL3-201ENST00000265334 TMEM132EQ6IEE7 984 aa15.95■□□□□ 0.14
CDKL3-201ENST00000265334 PPP4R2Q9NY27 417 aa15.95■□□□□ 0.14
CDKL3-201ENST00000265334 ARHGEF28Q8N1W1 1705 aaKnown RBP15.95■□□□□ 0.14
CDKL3-201ENST00000265334 ALKQ9UM73 1620 aa15.95■□□□□ 0.14
CDKL3-201ENST00000265334 PDE3BQ13370 1112 aa15.94■□□□□ 0.14
CDKL3-201ENST00000265334 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.94■□□□□ 0.14
CDKL3-201ENST00000265334 TRAK1Q9UPV9 953 aa15.93■□□□□ 0.14
CDKL3-201ENST00000265334 CARD14Q9BXL6 1004 aa15.92■□□□□ 0.14
CDKL3-201ENST00000265334 SETD1AO15047 1707 aaKnown RBP15.92■□□□□ 0.14
CDKL3-201ENST00000265334 SENP3-EIF4A1A0A087X0R7 540 aa15.91■□□□□ 0.14
CDKL3-201ENST00000265334 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
CDKL3-201ENST00000265334 PUS7Q96PZ0 661 aaKnown RBP15.91■□□□□ 0.14
CDKL3-201ENST00000265334 TMEM2Q9UHN6 1383 aa15.9■□□□□ 0.14
CDKL3-201ENST00000265334 NRXN3Q9Y4C0 1643 aa15.9■□□□□ 0.14
CDKL3-201ENST00000265334 YTHDC2Q9H6S0 1430 aaKnown RBP15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms