RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 NBPF8Q3BBV2 869 aa13.98□□□□□ -0.17
SNRNP40-201ENST00000263694 KDM4FA0A1W2PPD8 638 aa13.96□□□□□ -0.17
SNRNP40-201ENST00000263694 NUTM2DQ5VT03 806 aaPredicted RBP13.96□□□□□ -0.17
SNRNP40-201ENST00000263694 ADGRB3O60242 1522 aa13.96□□□□□ -0.17
SNRNP40-201ENST00000263694 STAG3Q9UJ98 1225 aa13.96□□□□□ -0.18
SNRNP40-201ENST00000263694 TMEM131LA2VDJ0 1609 aa13.95□□□□□ -0.18
SNRNP40-201ENST00000263694 PTPRMP28827 1452 aa13.95□□□□□ -0.18
SNRNP40-201ENST00000263694 NCBP3Q53F19 620 aaKnown RBP13.92□□□□□ -0.18
SNRNP40-201ENST00000263694 PPLO60437 1756 aa13.92□□□□□ -0.18
SNRNP40-201ENST00000263694 NEURL4Q96JN8 1562 aa13.91□□□□□ -0.18
SNRNP40-201ENST00000263694 IFT172Q9UG01 1749 aa13.91□□□□□ -0.18
SNRNP40-201ENST00000263694 A2ML1A8K2U0 1454 aa13.91□□□□□ -0.18
SNRNP40-201ENST00000263694 ADGRF5Q8IZF2 1346 aa13.9□□□□□ -0.18
SNRNP40-201ENST00000263694 UBR1Q8IWV7 1749 aa13.9□□□□□ -0.18
SNRNP40-201ENST00000263694 MYO3AQ8NEV4 1616 aa13.9□□□□□ -0.18
SNRNP40-201ENST00000263694 PRAG1Q86YV5 1406 aa13.89□□□□□ -0.19
SNRNP40-201ENST00000263694 NEXMIFQ5QGS0 1516 aa13.89□□□□□ -0.19
SNRNP40-201ENST00000263694 SETD1BQ9UPS6 1966 aaKnown RBP13.89□□□□□ -0.19
SNRNP40-201ENST00000263694 UHRF1BP1Q6BDS2 1440 aa13.89□□□□□ -0.19
SNRNP40-201ENST00000263694 NLRP1Q9C000 1473 aa13.88□□□□□ -0.19
SNRNP40-201ENST00000263694 RPGRIP1LQ68CZ1 1315 aa13.88□□□□□ -0.19
SNRNP40-201ENST00000263694 NBPF1Q3BBV0 1214 aa13.88□□□□□ -0.19
SNRNP40-201ENST00000263694 RIMS2Q9UQ26 1411 aa13.86□□□□□ -0.19
SNRNP40-201ENST00000263694 HIRIP3Q9BW71 556 aaPredicted RBP13.86□□□□□ -0.19
SNRNP40-201ENST00000263694 MYOM2P54296 1465 aa13.85□□□□□ -0.19
SNRNP40-201ENST00000263694 CEP170BQ9Y4F5 1589 aaPredicted RBP13.85□□□□□ -0.19
SNRNP40-201ENST00000263694 TRPM1Q7Z4N2 1603 aa13.85□□□□□ -0.19
SNRNP40-201ENST00000263694 VGFO15240 615 aaPredicted RBP13.84□□□□□ -0.19
SNRNP40-201ENST00000263694 CFAP70Q5T0N1 1121 aa13.84□□□□□ -0.19
SNRNP40-201ENST00000263694 STAC3Q96MF2 364 aa13.83□□□□□ -0.19
SNRNP40-201ENST00000263694 ZFYVE9O95405 1425 aa13.83□□□□□ -0.19
SNRNP40-201ENST00000263694 KDM5AP29375 1690 aaKnown RBP13.83□□□□□ -0.19
SNRNP40-201ENST00000263694 RALGAPBQ86X10 1494 aa13.83□□□□□ -0.2
SNRNP40-201ENST00000263694 NRXN1Q9ULB1 1477 aa13.83□□□□□ -0.2
SNRNP40-201ENST00000263694 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.2
SNRNP40-201ENST00000263694 LTKP29376 864 aa13.83□□□□□ -0.2
SNRNP40-201ENST00000263694 THEMISQ8N1K5 641 aaPredicted RBP13.82□□□□□ -0.2
SNRNP40-201ENST00000263694 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
SNRNP40-201ENST00000263694 ROCK2O75116 1388 aaKnown RBP13.81□□□□□ -0.2
SNRNP40-201ENST00000263694 CARD11Q9BXL7 1154 aa13.81□□□□□ -0.2
SNRNP40-201ENST00000263694 ZNF142P52746 1687 aaPredicted RBP13.81□□□□□ -0.2
SNRNP40-201ENST00000263694 TXNDC2Q86VQ3 553 aa13.8□□□□□ -0.2
SNRNP40-201ENST00000263694 HSPA5P11021 654 aaKnown RBP13.79□□□□□ -0.2
SNRNP40-201ENST00000263694 TMEM132EQ6IEE7 984 aa13.79□□□□□ -0.2
SNRNP40-201ENST00000263694 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.79□□□□□ -0.2
SNRNP40-201ENST00000263694 C14orf93Q9H972 538 aaKnown RBP13.79□□□□□ -0.2
SNRNP40-201ENST00000263694 ARHGAP23Q9P227 1491 aa13.79□□□□□ -0.2
SNRNP40-201ENST00000263694 SLIT1O75093 1534 aa13.78□□□□□ -0.2
SNRNP40-201ENST00000263694 BCANQ96GW7 911 aa13.78□□□□□ -0.2
SNRNP40-201ENST00000263694 HDGFP51858 240 aaKnown RBP13.77□□□□□ -0.21
SNRNP40-201ENST00000263694 EID1Q9Y6B2 187 aa13.77□□□□□ -0.21
SNRNP40-201ENST00000263694 KIAA1210Q9ULL0 1709 aa13.77□□□□□ -0.21
SNRNP40-201ENST00000263694 ZNF316A6NFI3 1004 aaPredicted RBP13.76□□□□□ -0.21
SNRNP40-201ENST00000263694 HSPA2P54652 639 aa13.76□□□□□ -0.21
SNRNP40-201ENST00000263694 EIF4G2P78344 907 aaKnown RBP eCLIP13.76□□□□□ -0.21
SNRNP40-201ENST00000263694 IQGAP1P46940 1657 aa13.76□□□□□ -0.21
SNRNP40-201ENST00000263694 NRXN3Q9Y4C0 1643 aa13.76□□□□□ -0.21
SNRNP40-201ENST00000263694 GPRASP1Q5JY77 1395 aa13.75□□□□□ -0.21
SNRNP40-201ENST00000263694 USP47Q96K76 1375 aa13.75□□□□□ -0.21
SNRNP40-201ENST00000263694 ALKQ9UM73 1620 aa13.75□□□□□ -0.21
SNRNP40-201ENST00000263694 ANKLE2Q86XL3 938 aa13.74□□□□□ -0.21
SNRNP40-201ENST00000263694 SLC26A8Q96RN1 970 aa13.74□□□□□ -0.21
SNRNP40-201ENST00000263694 SCAF11Q99590 1463 aaKnown RBP13.74□□□□□ -0.21
SNRNP40-201ENST00000263694 NCKAP5LQ9HCH0 1330 aa13.73□□□□□ -0.21
SNRNP40-201ENST00000263694 ASXL1Q8IXJ9 1541 aa13.73□□□□□ -0.21
SNRNP40-201ENST00000263694 STK26Q9P289 416 aa13.73□□□□□ -0.21
SNRNP40-201ENST00000263694 PLEKHG1Q9ULL1 1385 aa13.73□□□□□ -0.21
SNRNP40-201ENST00000263694 ADGRB1O14514 1584 aa13.73□□□□□ -0.21
SNRNP40-201ENST00000263694 ST20-MTHFSA0A0A6YYL1 179 aa13.72□□□□□ -0.21
SNRNP40-201ENST00000263694 TRAK1Q9UPV9 953 aa13.72□□□□□ -0.21
SNRNP40-201ENST00000263694 SETD1AO15047 1707 aaKnown RBP13.72□□□□□ -0.21
SNRNP40-201ENST00000263694 LAMC1P11047 1609 aa13.72□□□□□ -0.21
SNRNP40-201ENST00000263694 SETBP1Q9Y6X0 1596 aa13.72□□□□□ -0.21
SNRNP40-201ENST00000263694 METP08581 1390 aa13.71□□□□□ -0.21
SNRNP40-201ENST00000263694 ADAMTS13Q76LX8 1427 aa13.71□□□□□ -0.21
SNRNP40-201ENST00000263694 LMTK3Q96Q04 1460 aa13.71□□□□□ -0.21
SNRNP40-201ENST00000263694 C11orf95C9JLR9 678 aaPredicted RBP13.7□□□□□ -0.22
SNRNP40-201ENST00000263694 POLR1AO95602 1720 aaPredicted RBP13.68□□□□□ -0.22
SNRNP40-201ENST00000263694 YTHDC2Q9H6S0 1430 aaKnown RBP13.68□□□□□ -0.22
SNRNP40-201ENST00000263694 MED14O60244 1454 aa13.67□□□□□ -0.22
SNRNP40-201ENST00000263694 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
SNRNP40-201ENST00000263694 SAFB2Q14151 953 aaKnown RBP eCLIP13.66□□□□□ -0.22
SNRNP40-201ENST00000263694 TBX22Q9Y458 520 aa13.66□□□□□ -0.22
SNRNP40-201ENST00000263694 TESK2Q96S53 571 aa13.65□□□□□ -0.22
SNRNP40-201ENST00000263694 ARHGEF28Q8N1W1 1705 aaKnown RBP13.65□□□□□ -0.22
SNRNP40-201ENST00000263694 PTPRUQ92729 1446 aa13.65□□□□□ -0.22
SNRNP40-201ENST00000263694 LRPPRCP42704 1394 aaKnown RBP13.64□□□□□ -0.23
SNRNP40-201ENST00000263694 NPM3O75607 178 aaKnown RBP13.63□□□□□ -0.23
SNRNP40-201ENST00000263694 POTEHQ6S545 545 aa13.63□□□□□ -0.23
SNRNP40-201ENST00000263694 WAPLQ7Z5K2 1190 aa13.63□□□□□ -0.23
SNRNP40-201ENST00000263694 POLR3GLQ9BT43 218 aa13.63□□□□□ -0.23
SNRNP40-201ENST00000263694 STRCQ7RTU9 1775 aa13.63□□□□□ -0.23
SNRNP40-201ENST00000263694 EIF3AQ14152 1382 aaKnown RBP13.62□□□□□ -0.23
SNRNP40-201ENST00000263694 WASHC2AQ641Q2 1341 aa13.62□□□□□ -0.23
SNRNP40-201ENST00000263694 PRAM1Q96QH2 718 aa13.62□□□□□ -0.23
SNRNP40-201ENST00000263694 CENPJQ9HC77 1338 aaPredicted RBP13.62□□□□□ -0.23
SNRNP40-201ENST00000263694 AMOTL2Q9Y2J4 779 aa13.62□□□□□ -0.23
SNRNP40-201ENST00000263694 PLEKHH1Q9ULM0 1364 aa13.62□□□□□ -0.23
SNRNP40-201ENST00000263694 QRICH2Q9H0J4 1663 aa13.61□□□□□ -0.23
SNRNP40-201ENST00000263694 DIP2AQ14689 1571 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms