RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 TESK2Q96S53 571 aa21.87■■□□□ 1.09
VPS26A-201ENST00000263559 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
VPS26A-201ENST00000263559 NRXN1Q9ULB1 1477 aa21.85■■□□□ 1.09
VPS26A-201ENST00000263559 CFAP70Q5T0N1 1121 aa21.85■■□□□ 1.09
VPS26A-201ENST00000263559 IDI1Q13907 227 aa21.84■■□□□ 1.09
VPS26A-201ENST00000263559 MLECQ14165 292 aa21.84■■□□□ 1.09
VPS26A-201ENST00000263559 PRKRIP1Q9H875 184 aaPredicted RBP21.84■■□□□ 1.09
VPS26A-201ENST00000263559 CLTCQ00610 1675 aaKnown RBP21.84■■□□□ 1.09
VPS26A-201ENST00000263559 SCAF11Q99590 1463 aaKnown RBP21.83■■□□□ 1.08
VPS26A-201ENST00000263559 RPGRIP1LQ68CZ1 1315 aa21.83■■□□□ 1.08
VPS26A-201ENST00000263559 FBXO31Q5XUX0 539 aaPredicted RBP21.83■■□□□ 1.08
VPS26A-201ENST00000263559 SLC52A1Q9NWF4 448 aa21.83■■□□□ 1.08
VPS26A-201ENST00000263559 DISP3Q9P2K9 1392 aa21.81■■□□□ 1.08
VPS26A-201ENST00000263559 ERVK-7P63135 1459 aa21.78■■□□□ 1.08
VPS26A-201ENST00000263559 MYO5BQ9ULV0 1848 aa21.78■■□□□ 1.08
VPS26A-201ENST00000263559 TMF1P82094 1093 aa21.78■■□□□ 1.08
VPS26A-201ENST00000263559 PIK3C2GO75747 1445 aa21.77■■□□□ 1.08
VPS26A-201ENST00000263559 SCAF1Q9H7N4 1312 aaKnown RBP21.77■■□□□ 1.08
VPS26A-201ENST00000263559 NEXMIFQ5QGS0 1516 aa21.77■■□□□ 1.07
VPS26A-201ENST00000263559 TRHP20396 242 aaPredicted RBP21.76■■□□□ 1.07
VPS26A-201ENST00000263559 TMEM131LA2VDJ0 1609 aa21.75■■□□□ 1.07
VPS26A-201ENST00000263559 NUTM2DQ5VT03 806 aaPredicted RBP21.74■■□□□ 1.07
VPS26A-201ENST00000263559 C14orf93Q9H972 538 aaKnown RBP21.74■■□□□ 1.07
VPS26A-201ENST00000263559 EIF3AQ14152 1382 aaKnown RBP21.74■■□□□ 1.07
VPS26A-201ENST00000263559 VGFO15240 615 aaPredicted RBP21.73■■□□□ 1.07
VPS26A-201ENST00000263559 CCDC184Q52MB2 194 aa21.73■■□□□ 1.07
VPS26A-201ENST00000263559 SETBP1Q9Y6X0 1596 aa21.73■■□□□ 1.07
VPS26A-201ENST00000263559 CNGB1Q14028 1251 aaPredicted RBP21.71■■□□□ 1.07
VPS26A-201ENST00000263559 SPATA31D1Q6ZQQ2 1576 aa21.71■■□□□ 1.07
VPS26A-201ENST00000263559 ESF1Q9H501 851 aaKnown RBP21.7■■□□□ 1.06
VPS26A-201ENST00000263559 ADGRB1O14514 1584 aa21.68■■□□□ 1.06
VPS26A-201ENST00000263559 ZMYM3Q14202 1370 aa21.68■■□□□ 1.06
VPS26A-201ENST00000263559 ZFYVE9O95405 1425 aa21.67■■□□□ 1.06
VPS26A-201ENST00000263559 TMEM132EQ6IEE7 984 aa21.67■■□□□ 1.06
VPS26A-201ENST00000263559 GTF3C3Q9Y5Q9 886 aa21.66■■□□□ 1.06
VPS26A-201ENST00000263559 PER1O15534 1290 aaPredicted RBP21.65■■□□□ 1.06
VPS26A-201ENST00000263559 MRS2Q9HD23 443 aa21.65■■□□□ 1.06
VPS26A-201ENST00000263559 STAG3Q9UJ98 1225 aa21.65■■□□□ 1.06
VPS26A-201ENST00000263559 MYO3AQ8NEV4 1616 aa21.65■■□□□ 1.06
VPS26A-201ENST00000263559 TRAK1Q9UPV9 953 aa21.64■■□□□ 1.05
VPS26A-201ENST00000263559 CDCA8Q53HL2 280 aa21.63■■□□□ 1.05
VPS26A-201ENST00000263559 PANK3Q9H999 370 aa21.63■■□□□ 1.05
VPS26A-201ENST00000263559 SLC24A1O60721 1099 aa21.61■■□□□ 1.05
VPS26A-201ENST00000263559 CENPJQ9HC77 1338 aaPredicted RBP21.6■■□□□ 1.05
VPS26A-201ENST00000263559 A2ML1A8K2U0 1454 aa21.6■■□□□ 1.05
VPS26A-201ENST00000263559 SENP3Q9H4L4 574 aaPredicted RBP21.6■■□□□ 1.05
VPS26A-201ENST00000263559 KDM5AP29375 1690 aaKnown RBP21.59■■□□□ 1.05
VPS26A-201ENST00000263559 DNAJC5Q9H3Z4 198 aa21.59■■□□□ 1.05
VPS26A-201ENST00000263559 SBNO2Q9Y2G9 1366 aa21.58■■□□□ 1.05
VPS26A-201ENST00000263559 RALBP1Q15311 655 aa21.58■■□□□ 1.04
VPS26A-201ENST00000263559 KTN1Q86UP2 1357 aaKnown RBP21.58■■□□□ 1.04
VPS26A-201ENST00000263559 FAM9BQ8IZU0 186 aa21.57■■□□□ 1.04
VPS26A-201ENST00000263559 MYOM1P52179 1685 aa21.57■■□□□ 1.04
VPS26A-201ENST00000263559 QRICH2Q9H0J4 1663 aa21.57■■□□□ 1.04
VPS26A-201ENST00000263559 ARHGEF28Q8N1W1 1705 aaKnown RBP21.55■■□□□ 1.04
VPS26A-201ENST00000263559 ASXL1Q8IXJ9 1541 aa21.54■■□□□ 1.04
VPS26A-201ENST00000263559 HNRNPUQ00839 825 aaKnown RBP eCLIP21.54■■□□□ 1.04
VPS26A-201ENST00000263559 TNRQ92752 1358 aa21.54■■□□□ 1.04
VPS26A-201ENST00000263559 PARD3Q8TEW0 1356 aa21.53■■□□□ 1.04
VPS26A-201ENST00000263559 RIMS2Q9UQ26 1411 aa21.53■■□□□ 1.04
VPS26A-201ENST00000263559 MYBBP1AQ9BQG0 1328 aaKnown RBP21.53■■□□□ 1.04
VPS26A-201ENST00000263559 ALKQ9UM73 1620 aa21.51■■□□□ 1.03
VPS26A-201ENST00000263559 CC2D1BQ5T0F9 858 aaKnown RBP21.51■■□□□ 1.03
VPS26A-201ENST00000263559 TMC1Q8TDI8 760 aa21.49■■□□□ 1.03
VPS26A-201ENST00000263559 STK26Q9P289 416 aa21.49■■□□□ 1.03
VPS26A-201ENST00000263559 CEBPAP49715 358 aaPredicted RBP21.49■■□□□ 1.03
VPS26A-201ENST00000263559 KNSTRNQ9Y448 316 aa21.48■■□□□ 1.03
VPS26A-201ENST00000263559 BRD4O60885 1362 aaPredicted RBP21.47■■□□□ 1.03
VPS26A-201ENST00000263559 FER1L4A9Z1Z3 1794 aa21.47■■□□□ 1.03
VPS26A-201ENST00000263559 YTHDC2Q9H6S0 1430 aaKnown RBP21.46■■□□□ 1.03
VPS26A-201ENST00000263559 C3P01024 1663 aa21.46■■□□□ 1.03
VPS26A-201ENST00000263559 UBR1Q8IWV7 1749 aa21.45■■□□□ 1.03
VPS26A-201ENST00000263559 PNISRQ8TF01 805 aaKnown RBP21.45■■□□□ 1.02
VPS26A-201ENST00000263559 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.44■■□□□ 1.02
VPS26A-201ENST00000263559 AMER1Q5JTC6 1135 aaPredicted RBP21.44■■□□□ 1.02
VPS26A-201ENST00000263559 NLRP13Q86W25 1043 aa21.44■■□□□ 1.02
VPS26A-201ENST00000263559 SETD1AO15047 1707 aaKnown RBP21.43■■□□□ 1.02
VPS26A-201ENST00000263559 SAFB2Q14151 953 aaKnown RBP eCLIP21.43■■□□□ 1.02
VPS26A-201ENST00000263559 PTPRMP28827 1452 aa21.43■■□□□ 1.02
VPS26A-201ENST00000263559 TULP4Q9NRJ4 1543 aa21.42■■□□□ 1.02
VPS26A-201ENST00000263559 NRXN3Q9Y4C0 1643 aa21.41■■□□□ 1.02
VPS26A-201ENST00000263559 EVC2Q86UK5 1308 aa21.41■■□□□ 1.02
VPS26A-201ENST00000263559 HDGFP51858 240 aaKnown RBP21.4■■□□□ 1.02
VPS26A-201ENST00000263559 PLPPR3Q6T4P5 718 aa21.4■■□□□ 1.02
VPS26A-201ENST00000263559 PRAM1Q96QH2 718 aa21.4■■□□□ 1.02
VPS26A-201ENST00000263559 CARD14Q9BXL6 1004 aa21.4■■□□□ 1.02
VPS26A-201ENST00000263559 TMEM2Q9UHN6 1383 aa21.4■■□□□ 1.02
VPS26A-201ENST00000263559 NLRP1Q9C000 1473 aa21.4■■□□□ 1.02
VPS26A-201ENST00000263559 PUS7Q96PZ0 661 aaKnown RBP21.38■■□□□ 1.01
VPS26A-201ENST00000263559 SLC12A5Q9H2X9 1139 aa21.38■■□□□ 1.01
VPS26A-201ENST00000263559 POGKQ9P215 609 aa21.38■■□□□ 1.01
VPS26A-201ENST00000263559 NPC1L1Q9UHC9 1359 aa21.37■■□□□ 1.01
VPS26A-201ENST00000263559 LRPPRCP42704 1394 aaKnown RBP21.36■■□□□ 1.01
VPS26A-201ENST00000263559 CABP2Q9NPB3 220 aa21.35■■□□□ 1.01
VPS26A-201ENST00000263559 ZBED9Q6R2W3 1325 aa21.35■■□□□ 1.01
VPS26A-201ENST00000263559 MINK1Q8N4C8 1332 aaPredicted RBP21.35■■□□□ 1.01
VPS26A-201ENST00000263559 METP08581 1390 aa21.33■■□□□ 1.01
VPS26A-201ENST00000263559 DLC1Q96QB1 1528 aa21.33■■□□□ 1.01
VPS26A-201ENST00000263559 PPP2R1AP30153 589 aa21.32■■□□□ 1
VPS26A-201ENST00000263559 ABCC11Q96J66 1382 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms