RNA–Protein interactions for RNA: ENST00000263511.8

CROCCP3-201, Transcript of ciliary rootlet coiled-coil, rootletin pseudogene 3, humanhuman

TSL 1 (best) BASIC

Gene CROCCP3, Length 5,368 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CROCCP3-201ENST00000263511 ZBED9Q6R2W3 1325 aa20.73■□□□□ 0.91
CROCCP3-201ENST00000263511 MEX3CQ5U5Q3 659 aaKnown RBP20.73■□□□□ 0.91
CROCCP3-201ENST00000263511 RAD54L2Q9Y4B4 1467 aa20.73■□□□□ 0.91
CROCCP3-201ENST00000263511 PLIN1O60240 522 aa20.73■□□□□ 0.91
CROCCP3-201ENST00000263511 CPLX2Q6PUV4 134 aaKnown RBP20.73■□□□□ 0.91
CROCCP3-201ENST00000263511 ATP6V1DQ9Y5K8 247 aa20.73■□□□□ 0.91
CROCCP3-201ENST00000263511 RAPGEF4Q8WZA2 1011 aa20.72■□□□□ 0.91
CROCCP3-201ENST00000263511 FAM161AQ3B820 660 aa20.72■□□□□ 0.91
CROCCP3-201ENST00000263511 IFIT2P09913 472 aaKnown RBP20.7■□□□□ 0.9
CROCCP3-201ENST00000263511 ROCK1Q13464 1354 aa20.7■□□□□ 0.9
CROCCP3-201ENST00000263511 FOXD4L5Q5VV16 416 aaPredicted RBP20.7■□□□□ 0.9
CROCCP3-201ENST00000263511 FOXD4L4Q8WXT5 416 aaPredicted RBP20.7■□□□□ 0.9
CROCCP3-201ENST00000263511 FKBP5Q13451 457 aaPredicted RBP20.7■□□□□ 0.9
CROCCP3-201ENST00000263511 RUNDC1Q96C34 613 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 NECTIN2Q92692 538 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 FGD6Q6ZV73 1430 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 ZKSCAN1P17029 563 aaPredicted RBP20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 TRIM34Q9BYJ4 488 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 CUX1P39880 1505 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 MIA2Q96PC5 1412 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 CRBNQ96SW2 442 aa20.69■□□□□ 0.9
CROCCP3-201ENST00000263511 ZNF644Q9H582 1327 aaPredicted RBP20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 CEP89Q96ST8 783 aa20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 DDX11L8A8MPP1 907 aa20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 REC8O95072 547 aa20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 DZIP1LQ8IYY4 767 aaKnown RBP20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 GNAI1P63096 354 aa20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 EXOC6Q8TAG9 804 aa20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 TPM3P06753 285 aa20.68■□□□□ 0.9
CROCCP3-201ENST00000263511 VPS37DQ86XT2 251 aa20.67■□□□□ 0.9
CROCCP3-201ENST00000263511 G3BP1Q13283 466 aaKnown RBP eCLIP20.67■□□□□ 0.9
CROCCP3-201ENST00000263511 TSPYL4Q9UJ04 414 aa20.66■□□□□ 0.9
CROCCP3-201ENST00000263511 ANKRD50Q9ULJ7 1429 aa20.65■□□□□ 0.9
CROCCP3-201ENST00000263511 TPD52L1Q16890 204 aaPredicted RBP20.65■□□□□ 0.9
CROCCP3-201ENST00000263511 AEBP2Q6ZN18 517 aaPredicted RBP20.65■□□□□ 0.9
CROCCP3-201ENST00000263511 AQRO60306 1485 aaKnown RBP eCLIP20.64■□□□□ 0.89
CROCCP3-201ENST00000263511 APPP05067 770 aa20.64■□□□□ 0.89
CROCCP3-201ENST00000263511 PDE4AP27815 886 aa20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 AMER1Q5JTC6 1135 aaPredicted RBP20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 NLRP2Q9NX02 1062 aa20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 HSP90AB4PQ58FF6 505 aa20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 PES1O00541 588 aaKnown RBP20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 CTDP1Q9Y5B0 961 aaPredicted RBP20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 TRIM29Q14134 588 aa20.63■□□□□ 0.89
CROCCP3-201ENST00000263511 MCTP1Q6DN14 999 aa20.62■□□□□ 0.89
CROCCP3-201ENST00000263511 TRDNQ13061 729 aa20.62■□□□□ 0.89
CROCCP3-201ENST00000263511 RAD21O60216 631 aa20.61■□□□□ 0.89
CROCCP3-201ENST00000263511 GGNBP2Q9H3C7 697 aa20.61■□□□□ 0.89
CROCCP3-201ENST00000263511 RNF20Q5VTR2 975 aa20.61■□□□□ 0.89
CROCCP3-201ENST00000263511 HMOX1P09601 288 aa20.61■□□□□ 0.89
CROCCP3-201ENST00000263511 CPLX1O14810 134 aa20.6■□□□□ 0.89
CROCCP3-201ENST00000263511 NLRP6P59044 892 aa20.6■□□□□ 0.89
CROCCP3-201ENST00000263511 TSR1Q2NL82 804 aaKnown RBP20.6■□□□□ 0.89
CROCCP3-201ENST00000263511 PDE4CQ08493 712 aa20.6■□□□□ 0.89
CROCCP3-201ENST00000263511 TCEAL9Q9UHQ7 104 aa20.6■□□□□ 0.89
CROCCP3-201ENST00000263511 CABP2Q9NPB3 220 aa20.59■□□□□ 0.89
CROCCP3-201ENST00000263511 DDX49Q9Y6V7 483 aaKnown RBP20.59■□□□□ 0.89
CROCCP3-201ENST00000263511 ANO2Q9NQ90 1003 aa20.59■□□□□ 0.89
CROCCP3-201ENST00000263511 A0A0U1RQG5 324 aaPredicted RBP20.59■□□□□ 0.89
CROCCP3-201ENST00000263511 GOLGA6L19H0YKK7 550 aa20.59■□□□□ 0.89
CROCCP3-201ENST00000263511 BECN2A8MW95 431 aa20.58■□□□□ 0.89
CROCCP3-201ENST00000263511 PRM3Q9NNZ6 103 aa20.58■□□□□ 0.89
CROCCP3-201ENST00000263511 TPM2P07951 284 aa20.58■□□□□ 0.89
CROCCP3-201ENST00000263511 SKOR2Q2VWA4 1001 aaPredicted RBP20.58■□□□□ 0.88
CROCCP3-201ENST00000263511 TMEM132EQ6IEE7 984 aa20.58■□□□□ 0.88
CROCCP3-201ENST00000263511 RIC3Q7Z5B4 369 aa20.58■□□□□ 0.88
CROCCP3-201ENST00000263511 PRDM2Q13029 1718 aa20.57■□□□□ 0.88
CROCCP3-201ENST00000263511 GOLGA6L1Q8N7Z2 621 aa20.57■□□□□ 0.88
CROCCP3-201ENST00000263511 GPRASP1Q5JY77 1395 aa20.57■□□□□ 0.88
CROCCP3-201ENST00000263511 AFAP1Q8N556 730 aa20.57■□□□□ 0.88
CROCCP3-201ENST00000263511 FYCO1Q9BQS8 1478 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 DHX16O60231 1041 aaKnown RBP20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 CCDC7Q96M83 1385 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 ERC2O15083 957 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 FBXW7Q969H0 707 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 KIF7Q2M1P5 1343 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 ARHGAP5Q13017 1502 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 GRIN2BQ13224 1484 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 NUTM2GQ5VZR2 741 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 NCAPD3P42695 1498 aa20.56■□□□□ 0.88
CROCCP3-201ENST00000263511 RBM33Q96EV2 1170 aaKnown RBP20.55■□□□□ 0.88
CROCCP3-201ENST00000263511 TPM1P09493 284 aa20.55■□□□□ 0.88
CROCCP3-201ENST00000263511 FOXD4L6Q3SYB3 417 aaPredicted RBP20.55■□□□□ 0.88
CROCCP3-201ENST00000263511 FOXD4L3Q6VB84 417 aaPredicted RBP20.55■□□□□ 0.88
CROCCP3-201ENST00000263511 USP35Q9P2H5 1018 aa20.55■□□□□ 0.88
CROCCP3-201ENST00000263511 RRBP1Q9P2E9 1410 aaKnown RBP20.54■□□□□ 0.88
CROCCP3-201ENST00000263511 CCDC47Q96A33 483 aaKnown RBP20.54■□□□□ 0.88
CROCCP3-201ENST00000263511 ERICH2A1L162 156 aa20.54■□□□□ 0.88
CROCCP3-201ENST00000263511 CASKIN1Q8WXD9 1431 aa20.53■□□□□ 0.88
CROCCP3-201ENST00000263511 TXNDC2Q86VQ3 553 aa20.53■□□□□ 0.88
CROCCP3-201ENST00000263511 SYNJ2O15056 1496 aa20.53■□□□□ 0.88
CROCCP3-201ENST00000263511 LRRC9Q6ZRR7 1453 aa20.53■□□□□ 0.88
CROCCP3-201ENST00000263511 AIMP1Q12904 312 aaKnown RBP20.53■□□□□ 0.88
CROCCP3-201ENST00000263511 NCOA2Q15596 1464 aa20.53■□□□□ 0.88
CROCCP3-201ENST00000263511 NFXL1Q6ZNB6 911 aa20.52■□□□□ 0.88
CROCCP3-201ENST00000263511 AAMPQ13685 434 aa20.52■□□□□ 0.88
CROCCP3-201ENST00000263511 INTS3Q68E01 1043 aaKnown RBP20.52■□□□□ 0.87
CROCCP3-201ENST00000263511 UBTFL1P0CB47 393 aaPredicted RBP20.5■□□□□ 0.87
CROCCP3-201ENST00000263511 ABTB2Q8N961 1025 aa20.5■□□□□ 0.87
CROCCP3-201ENST00000263511 NEUROD6Q96NK8 337 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms