RNA–Protein interactions for RNA: ENST00000262613.9

SLC9A3R1-201, Transcript of SLC9A3 regulator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC9A3R1, Length 1,969 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC9A3R1-201ENST00000262613 LAMC1P11047 1609 aa29.18■■■□□ 2.26
SLC9A3R1-201ENST00000262613 TMEM131LA2VDJ0 1609 aa29.17■■■□□ 2.26
SLC9A3R1-201ENST00000262613 DDX10Q13206 875 aaKnown RBP29.17■■■□□ 2.26
SLC9A3R1-201ENST00000262613 USP47Q96K76 1375 aa29.16■■■□□ 2.26
SLC9A3R1-201ENST00000262613 CARD11Q9BXL7 1154 aa29.15■■■□□ 2.26
SLC9A3R1-201ENST00000262613 NRXN1Q9ULB1 1477 aa29.15■■■□□ 2.26
SLC9A3R1-201ENST00000262613 FER1L4A9Z1Z3 1794 aa29.15■■■□□ 2.26
SLC9A3R1-201ENST00000262613 MYO5BQ9ULV0 1848 aa29.14■■■□□ 2.26
SLC9A3R1-201ENST00000262613 RPGRIP1LQ68CZ1 1315 aa29.14■■■□□ 2.26
SLC9A3R1-201ENST00000262613 NBPF1Q3BBV0 1214 aa29.13■■■□□ 2.25
SLC9A3R1-201ENST00000262613 KIAA1210Q9ULL0 1709 aa29.13■■■□□ 2.25
SLC9A3R1-201ENST00000262613 NEXMIFQ5QGS0 1516 aa29.12■■■□□ 2.25
SLC9A3R1-201ENST00000262613 ADGRF5Q8IZF2 1346 aa29.1■■■□□ 2.25
SLC9A3R1-201ENST00000262613 TSHZ2Q9NRE2 1034 aa29.1■■■□□ 2.25
SLC9A3R1-201ENST00000262613 C3P01024 1663 aa29.07■■■□□ 2.24
SLC9A3R1-201ENST00000262613 CCER2I3L3R5 266 aa29.06■■■□□ 2.24
SLC9A3R1-201ENST00000262613 TNRQ92752 1358 aa29.05■■■□□ 2.24
SLC9A3R1-201ENST00000262613 PIK3C2GO75747 1445 aa29.04■■■□□ 2.24
SLC9A3R1-201ENST00000262613 POLR1AO95602 1720 aaPredicted RBP29.04■■■□□ 2.24
SLC9A3R1-201ENST00000262613 A2ML1A8K2U0 1454 aa29.01■■■□□ 2.23
SLC9A3R1-201ENST00000262613 ZFYVE9O95405 1425 aa29.01■■■□□ 2.23
SLC9A3R1-201ENST00000262613 IQGAP1P46940 1657 aa29.01■■■□□ 2.23
SLC9A3R1-201ENST00000262613 WASHC2AQ641Q2 1341 aa29■■■□□ 2.23
SLC9A3R1-201ENST00000262613 C11orf95C9JLR9 678 aaPredicted RBP28.99■■■□□ 2.23
SLC9A3R1-201ENST00000262613 VGFO15240 615 aaPredicted RBP28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 ADAMTSL3P82987 1691 aa28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 CFAP70Q5T0N1 1121 aa28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 KDM5AP29375 1690 aaKnown RBP28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 ST20-MTHFSA0A0A6YYL1 179 aa28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 CEBPAP49715 358 aaPredicted RBP28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 STAG3Q9UJ98 1225 aa28.97■■■□□ 2.23
SLC9A3R1-201ENST00000262613 CCDC7Q96M83 1385 aa28.96■■■□□ 2.23
SLC9A3R1-201ENST00000262613 SETBP1Q9Y6X0 1596 aa28.95■■■□□ 2.23
SLC9A3R1-201ENST00000262613 RIMS1Q86UR5 1692 aaKnown RBP28.94■■■□□ 2.22
SLC9A3R1-201ENST00000262613 SCAF11Q99590 1463 aaKnown RBP28.93■■■□□ 2.22
SLC9A3R1-201ENST00000262613 NUTM2DQ5VT03 806 aaPredicted RBP28.93■■■□□ 2.22
SLC9A3R1-201ENST00000262613 NLRP1Q9C000 1473 aa28.92■■■□□ 2.22
SLC9A3R1-201ENST00000262613 C14orf93Q9H972 538 aaKnown RBP28.92■■■□□ 2.22
SLC9A3R1-201ENST00000262613 UBR1Q8IWV7 1749 aa28.92■■■□□ 2.22
SLC9A3R1-201ENST00000262613 KIF7Q2M1P5 1343 aa28.91■■■□□ 2.22
SLC9A3R1-201ENST00000262613 ANP32CO43423 234 aa28.9■■■□□ 2.22
SLC9A3R1-201ENST00000262613 ADGRB1O14514 1584 aa28.89■■■□□ 2.22
SLC9A3R1-201ENST00000262613 RIMS2Q9UQ26 1411 aa28.89■■■□□ 2.21
SLC9A3R1-201ENST00000262613 FKBP8Q14318 412 aa28.84■■■□□ 2.21
SLC9A3R1-201ENST00000262613 TESK2Q96S53 571 aa28.83■■■□□ 2.21
SLC9A3R1-201ENST00000262613 MYO3AQ8NEV4 1616 aa28.82■■■□□ 2.2
SLC9A3R1-201ENST00000262613 EIF3AQ14152 1382 aaKnown RBP28.82■■■□□ 2.2
SLC9A3R1-201ENST00000262613 PLPPR3Q6T4P5 718 aa28.81■■■□□ 2.2
SLC9A3R1-201ENST00000262613 ASXL1Q8IXJ9 1541 aa28.79■■■□□ 2.2
SLC9A3R1-201ENST00000262613 TMEM2Q9UHN6 1383 aa28.78■■■□□ 2.2
SLC9A3R1-201ENST00000262613 ALKQ9UM73 1620 aa28.78■■■□□ 2.2
SLC9A3R1-201ENST00000262613 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.77■■■□□ 2.2
SLC9A3R1-201ENST00000262613 TMEM132EQ6IEE7 984 aa28.76■■■□□ 2.19
SLC9A3R1-201ENST00000262613 NEFLP07196 543 aa28.75■■■□□ 2.19
SLC9A3R1-201ENST00000262613 BCANQ96GW7 911 aa28.75■■■□□ 2.19
SLC9A3R1-201ENST00000262613 NRXN3Q9Y4C0 1643 aa28.74■■■□□ 2.19
SLC9A3R1-201ENST00000262613 DISP3Q9P2K9 1392 aa28.74■■■□□ 2.19
SLC9A3R1-201ENST00000262613 SETD1AO15047 1707 aaKnown RBP28.73■■■□□ 2.19
SLC9A3R1-201ENST00000262613 HDGFP51858 240 aaKnown RBP28.71■■■□□ 2.19
SLC9A3R1-201ENST00000262613 SLIT1O75093 1534 aa28.71■■■□□ 2.19
SLC9A3R1-201ENST00000262613 PTPRMP28827 1452 aa28.71■■■□□ 2.19
SLC9A3R1-201ENST00000262613 ARHGAP23Q9P227 1491 aa28.71■■■□□ 2.19
SLC9A3R1-201ENST00000262613 TMF1P82094 1093 aa28.7■■■□□ 2.19
SLC9A3R1-201ENST00000262613 ANP32EQ9BTT0 268 aa28.7■■■□□ 2.19
SLC9A3R1-201ENST00000262613 SENP3Q9H4L4 574 aaPredicted RBP28.7■■■□□ 2.19
SLC9A3R1-201ENST00000262613 CEP170BQ9Y4F5 1589 aaPredicted RBP28.7■■■□□ 2.19
SLC9A3R1-201ENST00000262613 ARHGEF28Q8N1W1 1705 aaKnown RBP28.7■■■□□ 2.19
SLC9A3R1-201ENST00000262613 POLR3GLQ9BT43 218 aa28.7■■■□□ 2.18
SLC9A3R1-201ENST00000262613 TRAK1Q9UPV9 953 aa28.69■■■□□ 2.18
SLC9A3R1-201ENST00000262613 ZNF142P52746 1687 aaPredicted RBP28.67■■■□□ 2.18
SLC9A3R1-201ENST00000262613 SBNO2Q9Y2G9 1366 aa28.67■■■□□ 2.18
SLC9A3R1-201ENST00000262613 QRICH2Q9H0J4 1663 aa28.66■■■□□ 2.18
SLC9A3R1-201ENST00000262613 CENPJQ9HC77 1338 aaPredicted RBP28.65■■■□□ 2.18
SLC9A3R1-201ENST00000262613 YTHDC2Q9H6S0 1430 aaKnown RBP28.64■■■□□ 2.18
SLC9A3R1-201ENST00000262613 SETD1BQ9UPS6 1966 aaKnown RBP28.64■■■□□ 2.18
SLC9A3R1-201ENST00000262613 THEMISQ8N1K5 641 aaPredicted RBP28.63■■■□□ 2.17
SLC9A3R1-201ENST00000262613 LTKP29376 864 aa28.62■■■□□ 2.17
SLC9A3R1-201ENST00000262613 PLEKHG1Q9ULL1 1385 aa28.62■■■□□ 2.17
SLC9A3R1-201ENST00000262613 SLC24A1O60721 1099 aa28.61■■■□□ 2.17
SLC9A3R1-201ENST00000262613 TXNDC2Q86VQ3 553 aa28.59■■■□□ 2.17
SLC9A3R1-201ENST00000262613 EID1Q9Y6B2 187 aa28.58■■■□□ 2.17
SLC9A3R1-201ENST00000262613 ADAMTS13Q76LX8 1427 aa28.57■■■□□ 2.16
SLC9A3R1-201ENST00000262613 CDCA8Q53HL2 280 aa28.57■■■□□ 2.16
SLC9A3R1-201ENST00000262613 STK26Q9P289 416 aa28.57■■■□□ 2.16
SLC9A3R1-201ENST00000262613 LRPPRCP42704 1394 aaKnown RBP28.56■■■□□ 2.16
SLC9A3R1-201ENST00000262613 DLC1Q96QB1 1528 aa28.55■■■□□ 2.16
SLC9A3R1-201ENST00000262613 METP08581 1390 aa28.55■■■□□ 2.16
SLC9A3R1-201ENST00000262613 MED14O60244 1454 aa28.53■■■□□ 2.16
SLC9A3R1-201ENST00000262613 MYOM1P52179 1685 aa28.52■■■□□ 2.16
SLC9A3R1-201ENST00000262613 KNDC1Q76NI1 1749 aa28.52■■■□□ 2.16
SLC9A3R1-201ENST00000262613 ABCC11Q96J66 1382 aa28.51■■■□□ 2.15
SLC9A3R1-201ENST00000262613 RBM19Q9Y4C8 960 aaKnown RBP28.48■■■□□ 2.15
SLC9A3R1-201ENST00000262613 TULP4Q9NRJ4 1543 aa28.48■■■□□ 2.15
SLC9A3R1-201ENST00000262613 PRKRIP1Q9H875 184 aaPredicted RBP28.48■■■□□ 2.15
SLC9A3R1-201ENST00000262613 PRAM1Q96QH2 718 aa28.47■■■□□ 2.15
SLC9A3R1-201ENST00000262613 DIP2AQ14689 1571 aa28.47■■■□□ 2.15
SLC9A3R1-201ENST00000262613 TECPR2O15040 1411 aa28.46■■■□□ 2.15
SLC9A3R1-201ENST00000262613 CPS1P31327 1500 aa28.44■■■□□ 2.14
SLC9A3R1-201ENST00000262613 POGKQ9P215 609 aa28.43■■■□□ 2.14
SLC9A3R1-201ENST00000262613 SAFB2Q14151 953 aaKnown RBP eCLIP28.42■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms