RNA–Protein interactions for RNA: ENST00000262580.8

GSDMD-201, Transcript of gasdermin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GSDMD, Length 1,762 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GSDMD-201ENST00000262580 NEXMIFQ5QGS0 1516 aa25.92■■□□□ 1.74
GSDMD-201ENST00000262580 KIAA1210Q9ULL0 1709 aa25.91■■□□□ 1.74
GSDMD-201ENST00000262580 ADGRF5Q8IZF2 1346 aa25.91■■□□□ 1.74
GSDMD-201ENST00000262580 POLR1AO95602 1720 aaPredicted RBP25.89■■□□□ 1.73
GSDMD-201ENST00000262580 RPGRIP1LQ68CZ1 1315 aa25.87■■□□□ 1.73
GSDMD-201ENST00000262580 C3P01024 1663 aa25.86■■□□□ 1.73
GSDMD-201ENST00000262580 WASHC2AQ641Q2 1341 aa25.86■■□□□ 1.73
GSDMD-201ENST00000262580 IQGAP1P46940 1657 aa25.85■■□□□ 1.73
GSDMD-201ENST00000262580 DDX10Q13206 875 aaKnown RBP25.84■■□□□ 1.73
GSDMD-201ENST00000262580 PIK3C2GO75747 1445 aa25.84■■□□□ 1.73
GSDMD-201ENST00000262580 C11orf95C9JLR9 678 aaPredicted RBP25.83■■□□□ 1.73
GSDMD-201ENST00000262580 TNRQ92752 1358 aa25.82■■□□□ 1.72
GSDMD-201ENST00000262580 CCDC7Q96M83 1385 aa25.8■■□□□ 1.72
GSDMD-201ENST00000262580 A2ML1A8K2U0 1454 aa25.8■■□□□ 1.72
GSDMD-201ENST00000262580 ST20-MTHFSA0A0A6YYL1 179 aa25.79■■□□□ 1.72
GSDMD-201ENST00000262580 CFAP70Q5T0N1 1121 aa25.79■■□□□ 1.72
GSDMD-201ENST00000262580 NUTM2DQ5VT03 806 aaPredicted RBP25.79■■□□□ 1.72
GSDMD-201ENST00000262580 CEBPAP49715 358 aaPredicted RBP25.77■■□□□ 1.72
GSDMD-201ENST00000262580 STAG3Q9UJ98 1225 aa25.77■■□□□ 1.72
GSDMD-201ENST00000262580 RIMS1Q86UR5 1692 aaKnown RBP25.76■■□□□ 1.71
GSDMD-201ENST00000262580 KIF7Q2M1P5 1343 aa25.76■■□□□ 1.71
GSDMD-201ENST00000262580 ZFYVE9O95405 1425 aa25.76■■□□□ 1.71
GSDMD-201ENST00000262580 MIER1Q8N108 512 aa25.76■■□□□ 1.71
GSDMD-201ENST00000262580 SCAF11Q99590 1463 aaKnown RBP25.76■■□□□ 1.71
GSDMD-201ENST00000262580 SETBP1Q9Y6X0 1596 aa25.75■■□□□ 1.71
GSDMD-201ENST00000262580 VGFO15240 615 aaPredicted RBP25.74■■□□□ 1.71
GSDMD-201ENST00000262580 ADAMTSL3P82987 1691 aa25.74■■□□□ 1.71
GSDMD-201ENST00000262580 UBR1Q8IWV7 1749 aa25.73■■□□□ 1.71
GSDMD-201ENST00000262580 KDM5AP29375 1690 aaKnown RBP25.73■■□□□ 1.71
GSDMD-201ENST00000262580 ADGRB1O14514 1584 aa25.72■■□□□ 1.71
GSDMD-201ENST00000262580 C14orf93Q9H972 538 aaKnown RBP25.71■■□□□ 1.71
GSDMD-201ENST00000262580 PLPPR3Q6T4P5 718 aa25.69■■□□□ 1.7
GSDMD-201ENST00000262580 NLRP1Q9C000 1473 aa25.69■■□□□ 1.7
GSDMD-201ENST00000262580 RIMS2Q9UQ26 1411 aa25.69■■□□□ 1.7
GSDMD-201ENST00000262580 TESK2Q96S53 571 aa25.66■■□□□ 1.7
GSDMD-201ENST00000262580 MYO3AQ8NEV4 1616 aa25.65■■□□□ 1.7
GSDMD-201ENST00000262580 ASXL1Q8IXJ9 1541 aa25.64■■□□□ 1.7
GSDMD-201ENST00000262580 EIF3AQ14152 1382 aaKnown RBP25.64■■□□□ 1.69
GSDMD-201ENST00000262580 SENP3Q9H4L4 574 aaPredicted RBP25.63■■□□□ 1.69
GSDMD-201ENST00000262580 POLR3GLQ9BT43 218 aa25.62■■□□□ 1.69
GSDMD-201ENST00000262580 DISP3Q9P2K9 1392 aa25.62■■□□□ 1.69
GSDMD-201ENST00000262580 TMEM132EQ6IEE7 984 aa25.61■■□□□ 1.69
GSDMD-201ENST00000262580 ALKQ9UM73 1620 aa25.6■■□□□ 1.69
GSDMD-201ENST00000262580 NRXN3Q9Y4C0 1643 aa25.59■■□□□ 1.69
GSDMD-201ENST00000262580 SETD1AO15047 1707 aaKnown RBP25.59■■□□□ 1.69
GSDMD-201ENST00000262580 TMEM2Q9UHN6 1383 aa25.58■■□□□ 1.69
GSDMD-201ENST00000262580 ARHGEF28Q8N1W1 1705 aaKnown RBP25.57■■□□□ 1.68
GSDMD-201ENST00000262580 PTPRMP28827 1452 aa25.55■■□□□ 1.68
GSDMD-201ENST00000262580 TMF1P82094 1093 aa25.54■■□□□ 1.68
GSDMD-201ENST00000262580 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.54■■□□□ 1.68
GSDMD-201ENST00000262580 TRAK1Q9UPV9 953 aa25.54■■□□□ 1.68
GSDMD-201ENST00000262580 QRICH2Q9H0J4 1663 aa25.54■■□□□ 1.68
GSDMD-201ENST00000262580 CEP170BQ9Y4F5 1589 aaPredicted RBP25.53■■□□□ 1.68
GSDMD-201ENST00000262580 SLIT1O75093 1534 aa25.51■■□□□ 1.67
GSDMD-201ENST00000262580 ARHGAP23Q9P227 1491 aa25.5■■□□□ 1.67
GSDMD-201ENST00000262580 ANP32CO43423 234 aa25.49■■□□□ 1.67
GSDMD-201ENST00000262580 CENPJQ9HC77 1338 aaPredicted RBP25.49■■□□□ 1.67
GSDMD-201ENST00000262580 ZNF142P52746 1687 aaPredicted RBP25.49■■□□□ 1.67
GSDMD-201ENST00000262580 YTHDC2Q9H6S0 1430 aaKnown RBP25.48■■□□□ 1.67
GSDMD-201ENST00000262580 HDGFP51858 240 aaKnown RBP25.48■■□□□ 1.67
GSDMD-201ENST00000262580 SBNO2Q9Y2G9 1366 aa25.48■■□□□ 1.67
GSDMD-201ENST00000262580 LTKP29376 864 aa25.45■■□□□ 1.66
GSDMD-201ENST00000262580 STK26Q9P289 416 aa25.44■■□□□ 1.66
GSDMD-201ENST00000262580 PLEKHG1Q9ULL1 1385 aa25.43■■□□□ 1.66
GSDMD-201ENST00000262580 MYOM1P52179 1685 aa25.43■■□□□ 1.66
GSDMD-201ENST00000262580 THEMISQ8N1K5 641 aaPredicted RBP25.42■■□□□ 1.66
GSDMD-201ENST00000262580 TXNDC2Q86VQ3 553 aa25.41■■□□□ 1.66
GSDMD-201ENST00000262580 ADAMTS13Q76LX8 1427 aa25.41■■□□□ 1.66
GSDMD-201ENST00000262580 METP08581 1390 aa25.4■■□□□ 1.66
GSDMD-201ENST00000262580 SETD1BQ9UPS6 1966 aaKnown RBP25.4■■□□□ 1.66
GSDMD-201ENST00000262580 CDCA8Q53HL2 280 aa25.39■■□□□ 1.66
GSDMD-201ENST00000262580 LRPPRCP42704 1394 aaKnown RBP25.39■■□□□ 1.66
GSDMD-201ENST00000262580 DLC1Q96QB1 1528 aa25.39■■□□□ 1.65
GSDMD-201ENST00000262580 EID1Q9Y6B2 187 aa25.39■■□□□ 1.65
GSDMD-201ENST00000262580 SLC24A1O60721 1099 aa25.38■■□□□ 1.65
GSDMD-201ENST00000262580 BCANQ96GW7 911 aa25.38■■□□□ 1.65
GSDMD-201ENST00000262580 KNDC1Q76NI1 1749 aa25.37■■□□□ 1.65
GSDMD-201ENST00000262580 TULP4Q9NRJ4 1543 aa25.37■■□□□ 1.65
GSDMD-201ENST00000262580 MED14O60244 1454 aa25.35■■□□□ 1.65
GSDMD-201ENST00000262580 SAFB2Q14151 953 aaKnown RBP eCLIP25.34■■□□□ 1.65
GSDMD-201ENST00000262580 PRAM1Q96QH2 718 aa25.33■■□□□ 1.65
GSDMD-201ENST00000262580 PRKRIP1Q9H875 184 aaPredicted RBP25.33■■□□□ 1.65
GSDMD-201ENST00000262580 ABCC11Q96J66 1382 aa25.32■■□□□ 1.64
GSDMD-201ENST00000262580 CCER2I3L3R5 266 aa25.32■■□□□ 1.64
GSDMD-201ENST00000262580 CPS1P31327 1500 aa25.31■■□□□ 1.64
GSDMD-201ENST00000262580 PANK3Q9H999 370 aa25.31■■□□□ 1.64
GSDMD-201ENST00000262580 POGKQ9P215 609 aa25.3■■□□□ 1.64
GSDMD-201ENST00000262580 TECPR2O15040 1411 aa25.3■■□□□ 1.64
GSDMD-201ENST00000262580 DIP2AQ14689 1571 aa25.29■■□□□ 1.64
GSDMD-201ENST00000262580 PLEKHH1Q9ULM0 1364 aa25.29■■□□□ 1.64
GSDMD-201ENST00000262580 YTHDC1Q96MU7 727 aaKnown RBP25.28■■□□□ 1.64
GSDMD-201ENST00000262580 SLC26A8Q96RN1 970 aa25.28■■□□□ 1.64
GSDMD-201ENST00000262580 PER1O15534 1290 aaPredicted RBP25.27■■□□□ 1.64
GSDMD-201ENST00000262580 CNGB1Q14028 1251 aaPredicted RBP25.27■■□□□ 1.64
GSDMD-201ENST00000262580 EVC2Q86UK5 1308 aa25.26■■□□□ 1.63
GSDMD-201ENST00000262580 MINK1Q8N4C8 1332 aaPredicted RBP25.26■■□□□ 1.63
GSDMD-201ENST00000262580 WAPLQ7Z5K2 1190 aa25.26■■□□□ 1.63
GSDMD-201ENST00000262580 PTPRUQ92729 1446 aa25.25■■□□□ 1.63
GSDMD-201ENST00000262580 FAM135BQ49AJ0 1406 aa25.23■■□□□ 1.63
GSDMD-201ENST00000262580 TBX22Q9Y458 520 aa25.22■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms