RNA–Protein interactions for RNA: ENST00000262428.4

COTL1-201, Transcript of coactosin like F-actin binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COTL1, Length 1,843 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COTL1-201ENST00000262428 NRXN1Q9ULB1 1477 aa23.34■■□□□ 1.33
COTL1-201ENST00000262428 LAMC1P11047 1609 aa23.33■■□□□ 1.33
COTL1-201ENST00000262428 NEXMIFQ5QGS0 1516 aa23.33■■□□□ 1.33
COTL1-201ENST00000262428 USP47Q96K76 1375 aa23.33■■□□□ 1.32
COTL1-201ENST00000262428 TNRQ92752 1358 aa23.32■■□□□ 1.32
COTL1-201ENST00000262428 KIAA1210Q9ULL0 1709 aa23.32■■□□□ 1.32
COTL1-201ENST00000262428 CEBPAP49715 358 aaPredicted RBP23.31■■□□□ 1.32
COTL1-201ENST00000262428 ADAMTSL3P82987 1691 aa23.3■■□□□ 1.32
COTL1-201ENST00000262428 A2ML1A8K2U0 1454 aa23.28■■□□□ 1.32
COTL1-201ENST00000262428 STAG3Q9UJ98 1225 aa23.28■■□□□ 1.32
COTL1-201ENST00000262428 ZFYVE9O95405 1425 aa23.27■■□□□ 1.32
COTL1-201ENST00000262428 VGFO15240 615 aaPredicted RBP23.26■■□□□ 1.31
COTL1-201ENST00000262428 RIMS1Q86UR5 1692 aaKnown RBP23.26■■□□□ 1.31
COTL1-201ENST00000262428 PIK3C2GO75747 1445 aa23.25■■□□□ 1.31
COTL1-201ENST00000262428 CFAP70Q5T0N1 1121 aa23.25■■□□□ 1.31
COTL1-201ENST00000262428 NUTM2DQ5VT03 806 aaPredicted RBP23.24■■□□□ 1.31
COTL1-201ENST00000262428 KDM5AP29375 1690 aaKnown RBP23.23■■□□□ 1.31
COTL1-201ENST00000262428 NLRP1Q9C000 1473 aa23.21■■□□□ 1.31
COTL1-201ENST00000262428 ST20-MTHFSA0A0A6YYL1 179 aa23.21■■□□□ 1.31
COTL1-201ENST00000262428 C11orf95C9JLR9 678 aaPredicted RBP23.21■■□□□ 1.31
COTL1-201ENST00000262428 C14orf93Q9H972 538 aaKnown RBP23.21■■□□□ 1.31
COTL1-201ENST00000262428 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
COTL1-201ENST00000262428 UBR1Q8IWV7 1749 aa23.21■■□□□ 1.31
COTL1-201ENST00000262428 POLR1AO95602 1720 aaPredicted RBP23.2■■□□□ 1.3
COTL1-201ENST00000262428 PLPPR3Q6T4P5 718 aa23.19■■□□□ 1.3
COTL1-201ENST00000262428 WASHC2AQ641Q2 1341 aa23.19■■□□□ 1.3
COTL1-201ENST00000262428 DDX10Q13206 875 aaKnown RBP23.18■■□□□ 1.3
COTL1-201ENST00000262428 RIMS2Q9UQ26 1411 aa23.18■■□□□ 1.3
COTL1-201ENST00000262428 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
COTL1-201ENST00000262428 SCAF11Q99590 1463 aaKnown RBP23.17■■□□□ 1.3
COTL1-201ENST00000262428 CCDC7Q96M83 1385 aa23.16■■□□□ 1.3
COTL1-201ENST00000262428 ADGRB1O14514 1584 aa23.13■■□□□ 1.29
COTL1-201ENST00000262428 KIF7Q2M1P5 1343 aa23.13■■□□□ 1.29
COTL1-201ENST00000262428 MYO3AQ8NEV4 1616 aa23.12■■□□□ 1.29
COTL1-201ENST00000262428 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
COTL1-201ENST00000262428 TMEM2Q9UHN6 1383 aa23.11■■□□□ 1.29
COTL1-201ENST00000262428 TESK2Q96S53 571 aa23.1■■□□□ 1.29
COTL1-201ENST00000262428 HDGFP51858 240 aaKnown RBP23.09■■□□□ 1.29
COTL1-201ENST00000262428 TMEM132EQ6IEE7 984 aa23.09■■□□□ 1.29
COTL1-201ENST00000262428 ALKQ9UM73 1620 aa23.08■■□□□ 1.28
COTL1-201ENST00000262428 SETD1BQ9UPS6 1966 aaKnown RBP23.07■■□□□ 1.28
COTL1-201ENST00000262428 EIF3AQ14152 1382 aaKnown RBP23.06■■□□□ 1.28
COTL1-201ENST00000262428 SENP3Q9H4L4 574 aaPredicted RBP23.06■■□□□ 1.28
COTL1-201ENST00000262428 PTPRMP28827 1452 aa23.05■■□□□ 1.28
COTL1-201ENST00000262428 ASXL1Q8IXJ9 1541 aa23.05■■□□□ 1.28
COTL1-201ENST00000262428 SLIT1O75093 1534 aa23.04■■□□□ 1.28
COTL1-201ENST00000262428 MIER1Q8N108 512 aa23.04■■□□□ 1.28
COTL1-201ENST00000262428 ARHGAP23Q9P227 1491 aa23.04■■□□□ 1.28
COTL1-201ENST00000262428 CEP170BQ9Y4F5 1589 aaPredicted RBP23.04■■□□□ 1.28
COTL1-201ENST00000262428 THEMISQ8N1K5 641 aaPredicted RBP23.03■■□□□ 1.28
COTL1-201ENST00000262428 NRXN3Q9Y4C0 1643 aa23.03■■□□□ 1.28
COTL1-201ENST00000262428 SETD1AO15047 1707 aaKnown RBP23.03■■□□□ 1.28
COTL1-201ENST00000262428 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
COTL1-201ENST00000262428 LTKP29376 864 aa23.01■■□□□ 1.27
COTL1-201ENST00000262428 ZNF142P52746 1687 aaPredicted RBP23.01■■□□□ 1.27
COTL1-201ENST00000262428 TMF1P82094 1093 aa23■■□□□ 1.27
COTL1-201ENST00000262428 DISP3Q9P2K9 1392 aa23■■□□□ 1.27
COTL1-201ENST00000262428 TXNDC2Q86VQ3 553 aa22.99■■□□□ 1.27
COTL1-201ENST00000262428 POLR3GLQ9BT43 218 aa22.98■■□□□ 1.27
COTL1-201ENST00000262428 ARHGEF28Q8N1W1 1705 aaKnown RBP22.98■■□□□ 1.27
COTL1-201ENST00000262428 EID1Q9Y6B2 187 aa22.98■■□□□ 1.27
COTL1-201ENST00000262428 PLEKHG1Q9ULL1 1385 aa22.97■■□□□ 1.27
COTL1-201ENST00000262428 YTHDC2Q9H6S0 1430 aaKnown RBP22.97■■□□□ 1.27
COTL1-201ENST00000262428 CENPJQ9HC77 1338 aaPredicted RBP22.96■■□□□ 1.27
COTL1-201ENST00000262428 SBNO2Q9Y2G9 1366 aa22.95■■□□□ 1.26
COTL1-201ENST00000262428 SLC24A1O60721 1099 aa22.95■■□□□ 1.26
COTL1-201ENST00000262428 STK26Q9P289 416 aa22.94■■□□□ 1.26
COTL1-201ENST00000262428 QRICH2Q9H0J4 1663 aa22.94■■□□□ 1.26
COTL1-201ENST00000262428 ADAMTS13Q76LX8 1427 aa22.93■■□□□ 1.26
COTL1-201ENST00000262428 BCANQ96GW7 911 aa22.92■■□□□ 1.26
COTL1-201ENST00000262428 METP08581 1390 aa22.92■■□□□ 1.26
COTL1-201ENST00000262428 LRPPRCP42704 1394 aaKnown RBP22.91■■□□□ 1.26
COTL1-201ENST00000262428 MED14O60244 1454 aa22.9■■□□□ 1.26
COTL1-201ENST00000262428 CDCA8Q53HL2 280 aa22.89■■□□□ 1.26
COTL1-201ENST00000262428 ABCC11Q96J66 1382 aa22.88■■□□□ 1.25
COTL1-201ENST00000262428 DLC1Q96QB1 1528 aa22.88■■□□□ 1.25
COTL1-201ENST00000262428 KDM4FA0A1W2PPD8 638 aa22.87■■□□□ 1.25
COTL1-201ENST00000262428 ANP32CO43423 234 aa22.86■■□□□ 1.25
COTL1-201ENST00000262428 ANKLE2Q86XL3 938 aa22.85■■□□□ 1.25
COTL1-201ENST00000262428 PRAM1Q96QH2 718 aa22.85■■□□□ 1.25
COTL1-201ENST00000262428 TBX22Q9Y458 520 aa22.85■■□□□ 1.25
COTL1-201ENST00000262428 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
COTL1-201ENST00000262428 SLC26A8Q96RN1 970 aa22.84■■□□□ 1.25
COTL1-201ENST00000262428 POGKQ9P215 609 aa22.82■■□□□ 1.24
COTL1-201ENST00000262428 DIP2AQ14689 1571 aa22.82■■□□□ 1.24
COTL1-201ENST00000262428 TECPR2O15040 1411 aa22.82■■□□□ 1.24
COTL1-201ENST00000262428 SAFB2Q14151 953 aaKnown RBP eCLIP22.81■■□□□ 1.24
COTL1-201ENST00000262428 SIRT1Q96EB6 747 aa22.81■■□□□ 1.24
COTL1-201ENST00000262428 MYOM1P52179 1685 aa22.8■■□□□ 1.24
COTL1-201ENST00000262428 TULP4Q9NRJ4 1543 aa22.8■■□□□ 1.24
COTL1-201ENST00000262428 CPS1P31327 1500 aa22.79■■□□□ 1.24
COTL1-201ENST00000262428 WAPLQ7Z5K2 1190 aa22.78■■□□□ 1.24
COTL1-201ENST00000262428 EVC2Q86UK5 1308 aa22.78■■□□□ 1.24
COTL1-201ENST00000262428 PUS7Q96PZ0 661 aaKnown RBP22.78■■□□□ 1.24
COTL1-201ENST00000262428 FAM135BQ49AJ0 1406 aa22.77■■□□□ 1.24
COTL1-201ENST00000262428 PTPRUQ92729 1446 aa22.77■■□□□ 1.24
COTL1-201ENST00000262428 PLEKHH1Q9ULM0 1364 aa22.77■■□□□ 1.24
COTL1-201ENST00000262428 PANK3Q9H999 370 aa22.77■■□□□ 1.24
COTL1-201ENST00000262428 MINK1Q8N4C8 1332 aaPredicted RBP22.76■■□□□ 1.23
COTL1-201ENST00000262428 PER1O15534 1290 aaPredicted RBP22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms