RNA–Protein interactions for RNA: ENST00000261448.5

CASQ2-201, Transcript of calsequestrin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASQ2, Length 2,674 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASQ2-201ENST00000261448 KIAA1210Q9ULL0 1709 aa16.22■□□□□ 0.19
CASQ2-201ENST00000261448 CFAP70Q5T0N1 1121 aa16.22■□□□□ 0.19
CASQ2-201ENST00000261448 NRXN1Q9ULB1 1477 aa16.21■□□□□ 0.19
CASQ2-201ENST00000261448 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.19
CASQ2-201ENST00000261448 CHGAP10645 457 aaKnown RBP16.2■□□□□ 0.18
CASQ2-201ENST00000261448 SUPT16HQ9Y5B9 1047 aaKnown RBP16.2■□□□□ 0.18
CASQ2-201ENST00000261448 ARHGAP31Q2M1Z3 1444 aa16.19■□□□□ 0.18
CASQ2-201ENST00000261448 SYNMO15061 1565 aa16.18■□□□□ 0.18
CASQ2-201ENST00000261448 ZC3H13Q5T200 1668 aaKnown RBP16.17■□□□□ 0.18
CASQ2-201ENST00000261448 PIK3C2BO00750 1634 aa16.16■□□□□ 0.18
CASQ2-201ENST00000261448 KTN1Q86UP2 1357 aaKnown RBP16.16■□□□□ 0.18
CASQ2-201ENST00000261448 RALBP1Q15311 655 aa16.16■□□□□ 0.18
CASQ2-201ENST00000261448 PANK3Q9H999 370 aa16.16■□□□□ 0.18
CASQ2-201ENST00000261448 PPLO60437 1756 aa16.15■□□□□ 0.18
CASQ2-201ENST00000261448 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
CASQ2-201ENST00000261448 PIK3C2GO75747 1445 aa16.14■□□□□ 0.17
CASQ2-201ENST00000261448 EIF3AQ14152 1382 aaKnown RBP16.14■□□□□ 0.17
CASQ2-201ENST00000261448 MYBBP1AQ9BQG0 1328 aaKnown RBP16.14■□□□□ 0.17
CASQ2-201ENST00000261448 KIF13AQ9H1H9 1805 aa16.13■□□□□ 0.17
CASQ2-201ENST00000261448 PARD3Q8TEW0 1356 aa16.13■□□□□ 0.17
CASQ2-201ENST00000261448 IDI1Q13907 227 aa16.13■□□□□ 0.17
CASQ2-201ENST00000261448 PNISRQ8TF01 805 aaKnown RBP16.13■□□□□ 0.17
CASQ2-201ENST00000261448 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
CASQ2-201ENST00000261448 TMC1Q8TDI8 760 aa16.12■□□□□ 0.17
CASQ2-201ENST00000261448 REREQ9P2R6 1566 aa16.11■□□□□ 0.17
CASQ2-201ENST00000261448 BRD4O60885 1362 aaPredicted RBP16.11■□□□□ 0.17
CASQ2-201ENST00000261448 ZBED9Q6R2W3 1325 aa16.1■□□□□ 0.17
CASQ2-201ENST00000261448 SETBP1Q9Y6X0 1596 aa16.1■□□□□ 0.17
CASQ2-201ENST00000261448 AGLP35573 1532 aa16.1■□□□□ 0.17
CASQ2-201ENST00000261448 SLC52A1Q9NWF4 448 aa16.1■□□□□ 0.17
CASQ2-201ENST00000261448 CDCA8Q53HL2 280 aa16.09■□□□□ 0.17
CASQ2-201ENST00000261448 FBXO31Q5XUX0 539 aaPredicted RBP16.09■□□□□ 0.17
CASQ2-201ENST00000261448 PREX1Q8TCU6 1659 aa16.08■□□□□ 0.17
CASQ2-201ENST00000261448 NEXMIFQ5QGS0 1516 aa16.08■□□□□ 0.17
CASQ2-201ENST00000261448 ADGRB1O14514 1584 aa16.08■□□□□ 0.17
CASQ2-201ENST00000261448 CC2D1BQ5T0F9 858 aaKnown RBP16.08■□□□□ 0.16
CASQ2-201ENST00000261448 NUTM2DQ5VT03 806 aaPredicted RBP16.08■□□□□ 0.16
CASQ2-201ENST00000261448 FKBP8Q14318 412 aa16.07■□□□□ 0.16
CASQ2-201ENST00000261448 ERVK-7P63135 1459 aa16.07■□□□□ 0.16
CASQ2-201ENST00000261448 VGFO15240 615 aaPredicted RBP16.06■□□□□ 0.16
CASQ2-201ENST00000261448 TMEM132EQ6IEE7 984 aa16.06■□□□□ 0.16
CASQ2-201ENST00000261448 NLRP13Q86W25 1043 aa16.06■□□□□ 0.16
CASQ2-201ENST00000261448 LRPPRCP42704 1394 aaKnown RBP16.06■□□□□ 0.16
CASQ2-201ENST00000261448 MYO3AQ8NEV4 1616 aa16.06■□□□□ 0.16
CASQ2-201ENST00000261448 PPP6R1Q9UPN7 881 aa16.06■□□□□ 0.16
CASQ2-201ENST00000261448 MYOM1P52179 1685 aa16.05■□□□□ 0.16
CASQ2-201ENST00000261448 TRAK1Q9UPV9 953 aa16.05■□□□□ 0.16
CASQ2-201ENST00000261448 SBNO2Q9Y2G9 1366 aa16.04■□□□□ 0.16
CASQ2-201ENST00000261448 TMEM131LA2VDJ0 1609 aa16.04■□□□□ 0.16
CASQ2-201ENST00000261448 SLC24A1O60721 1099 aa16.04■□□□□ 0.16
CASQ2-201ENST00000261448 CENPJQ9HC77 1338 aaPredicted RBP16.03■□□□□ 0.16
CASQ2-201ENST00000261448 KDM5AP29375 1690 aaKnown RBP16.03■□□□□ 0.16
CASQ2-201ENST00000261448 ZFYVE9O95405 1425 aa16.03■□□□□ 0.16
CASQ2-201ENST00000261448 AMER1Q5JTC6 1135 aaPredicted RBP16.02■□□□□ 0.16
CASQ2-201ENST00000261448 ARHGEF40Q8TER5 1519 aa16.02■□□□□ 0.16
CASQ2-201ENST00000261448 KNSTRNQ9Y448 316 aa16.02■□□□□ 0.16
CASQ2-201ENST00000261448 MYO5BQ9ULV0 1848 aa16.02■□□□□ 0.15
CASQ2-201ENST00000261448 CLTCQ00610 1675 aaKnown RBP16.01■□□□□ 0.15
CASQ2-201ENST00000261448 MLECQ14165 292 aa16.01■□□□□ 0.15
CASQ2-201ENST00000261448 NEFLP07196 543 aa16■□□□□ 0.15
CASQ2-201ENST00000261448 SENP3-EIF4A1A0A087X0R7 540 aa15.99■□□□□ 0.15
CASQ2-201ENST00000261448 BCANQ96GW7 911 aa15.98■□□□□ 0.15
CASQ2-201ENST00000261448 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
CASQ2-201ENST00000261448 QRICH2Q9H0J4 1663 aa15.97■□□□□ 0.15
CASQ2-201ENST00000261448 CARD14Q9BXL6 1004 aa15.97■□□□□ 0.15
CASQ2-201ENST00000261448 SPATA31D1Q6ZQQ2 1576 aa15.96■□□□□ 0.15
CASQ2-201ENST00000261448 SENP3Q9H4L4 574 aaPredicted RBP15.96■□□□□ 0.15
CASQ2-201ENST00000261448 NPC1L1Q9UHC9 1359 aa15.96■□□□□ 0.14
CASQ2-201ENST00000261448 PPP2R1AP30153 589 aa15.95■□□□□ 0.14
CASQ2-201ENST00000261448 ARHGEF28Q8N1W1 1705 aaKnown RBP15.94■□□□□ 0.14
CASQ2-201ENST00000261448 SMG6Q86US8 1419 aaKnown RBP15.94■□□□□ 0.14
CASQ2-201ENST00000261448 STAG3Q9UJ98 1225 aa15.92■□□□□ 0.14
CASQ2-201ENST00000261448 ZMYM3Q14202 1370 aa15.92■□□□□ 0.14
CASQ2-201ENST00000261448 A2ML1A8K2U0 1454 aa15.92■□□□□ 0.14
CASQ2-201ENST00000261448 IRX6P78412 446 aaPredicted RBP15.91■□□□□ 0.14
CASQ2-201ENST00000261448 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
CASQ2-201ENST00000261448 STK26Q9P289 416 aa15.91■□□□□ 0.14
CASQ2-201ENST00000261448 NUDCQ9Y266 331 aa15.9■□□□□ 0.14
CASQ2-201ENST00000261448 TULP4Q9NRJ4 1543 aa15.9■□□□□ 0.14
CASQ2-201ENST00000261448 INSRP06213 1382 aa15.89■□□□□ 0.13
CASQ2-201ENST00000261448 ALKQ9UM73 1620 aa15.89■□□□□ 0.13
CASQ2-201ENST00000261448 EVC2Q86UK5 1308 aa15.88■□□□□ 0.13
CASQ2-201ENST00000261448 BLMP54132 1417 aaPredicted RBP15.88■□□□□ 0.13
CASQ2-201ENST00000261448 SAFB2Q14151 953 aaKnown RBP eCLIP15.88■□□□□ 0.13
CASQ2-201ENST00000261448 PUS7Q96PZ0 661 aaKnown RBP15.88■□□□□ 0.13
CASQ2-201ENST00000261448 ESF1Q9H501 851 aaKnown RBP15.88■□□□□ 0.13
CASQ2-201ENST00000261448 PTPRMP28827 1452 aa15.88■□□□□ 0.13
CASQ2-201ENST00000261448 YTHDC2Q9H6S0 1430 aaKnown RBP15.88■□□□□ 0.13
CASQ2-201ENST00000261448 ADAMTS8Q9UP79 889 aa15.87■□□□□ 0.13
CASQ2-201ENST00000261448 RIMS2Q9UQ26 1411 aa15.86■□□□□ 0.13
CASQ2-201ENST00000261448 SALL2Q9Y467 1007 aaPredicted RBP15.85■□□□□ 0.13
CASQ2-201ENST00000261448 NSD3Q9BZ95 1437 aa15.85■□□□□ 0.13
CASQ2-201ENST00000261448 CABP2Q9NPB3 220 aa15.85■□□□□ 0.13
CASQ2-201ENST00000261448 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
CASQ2-201ENST00000261448 RNF123Q5XPI4 1314 aa15.81■□□□□ 0.12
CASQ2-201ENST00000261448 TNRQ92752 1358 aa15.81■□□□□ 0.12
CASQ2-201ENST00000261448 ERICH6BQ5W0A0 696 aa15.81■□□□□ 0.12
CASQ2-201ENST00000261448 MINK1Q8N4C8 1332 aaPredicted RBP15.81■□□□□ 0.12
CASQ2-201ENST00000261448 SETD1AO15047 1707 aaKnown RBP15.81■□□□□ 0.12
CASQ2-201ENST00000261448 POGKQ9P215 609 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms