RNA–Protein interactions for RNA: ENST00000261368.12

SNCAIP-202, Transcript of synuclein alpha interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNCAIP, Length 3,745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-202ENST00000261368 KDM5DQ9BY66 1539 aa20.88■□□□□ 0.93
SNCAIP-202ENST00000261368 GSE1Q14687 1217 aa20.88■□□□□ 0.93
SNCAIP-202ENST00000261368 BRPF3Q9ULD4 1205 aa20.88■□□□□ 0.93
SNCAIP-202ENST00000261368 CENPJQ9HC77 1338 aaPredicted RBP20.87■□□□□ 0.93
SNCAIP-202ENST00000261368 SAFB2Q14151 953 aaKnown RBP eCLIP20.87■□□□□ 0.93
SNCAIP-202ENST00000261368 NUTM2DQ5VT03 806 aaPredicted RBP20.87■□□□□ 0.93
SNCAIP-202ENST00000261368 SPRYD3Q8NCJ5 442 aa20.86■□□□□ 0.93
SNCAIP-202ENST00000261368 E9PSI1 815 aa20.85■□□□□ 0.93
SNCAIP-202ENST00000261368 FRAT2O75474 233 aaPredicted RBP20.85■□□□□ 0.93
SNCAIP-202ENST00000261368 ABCA8O94911 1581 aa20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 EIF5BO60841 1220 aaKnown RBP20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 UPF2Q9HAU5 1272 aaKnown RBP20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 ANO8Q9HCE9 1232 aaPredicted RBP20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 GPRASP1Q5JY77 1395 aa20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 ADCY10Q96PN6 1610 aa20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 KANK1Q14678 1352 aa20.84■□□□□ 0.93
SNCAIP-202ENST00000261368 BLMP54132 1417 aaPredicted RBP20.83■□□□□ 0.93
SNCAIP-202ENST00000261368 SAMD9LQ8IVG5 1584 aa20.83■□□□□ 0.93
SNCAIP-202ENST00000261368 EIF3AQ14152 1382 aaKnown RBP20.83■□□□□ 0.93
SNCAIP-202ENST00000261368 DMRT2Q9Y5R5 561 aa20.81■□□□□ 0.92
SNCAIP-202ENST00000261368 GGT6Q6P531 493 aa20.8■□□□□ 0.92
SNCAIP-202ENST00000261368 C8orf34Q49A92 452 aa20.8■□□□□ 0.92
SNCAIP-202ENST00000261368 MAGI2Q86UL8 1455 aa20.8■□□□□ 0.92
SNCAIP-202ENST00000261368 IGHDP01880 384 aa20.79■□□□□ 0.92
SNCAIP-202ENST00000261368 KDM2BQ8NHM5 1336 aa20.79■□□□□ 0.92
SNCAIP-202ENST00000261368 BECN1Q14457 450 aa20.78■□□□□ 0.92
SNCAIP-202ENST00000261368 TMEM132EQ6IEE7 984 aa20.78■□□□□ 0.92
SNCAIP-202ENST00000261368 TRPM1Q7Z4N2 1603 aa20.78■□□□□ 0.92
SNCAIP-202ENST00000261368 ZMYM4Q5VZL5 1548 aa20.78■□□□□ 0.92
SNCAIP-202ENST00000261368 U2SURPO15042 1029 aaKnown RBP20.77■□□□□ 0.92
SNCAIP-202ENST00000261368 U2AF1L5P0DN76 240 aaPredicted RBP20.77■□□□□ 0.92
SNCAIP-202ENST00000261368 U2AF1Q01081 240 aaKnown RBP eCLIP20.77■□□□□ 0.92
SNCAIP-202ENST00000261368 SLC12A5Q9H2X9 1139 aa20.77■□□□□ 0.92
SNCAIP-202ENST00000261368 FTSJ3Q8IY81 847 aaKnown RBP20.77■□□□□ 0.91
SNCAIP-202ENST00000261368 ARHGEF5Q12774 1597 aa20.76■□□□□ 0.91
SNCAIP-202ENST00000261368 ADGRF5Q8IZF2 1346 aa20.76■□□□□ 0.91
SNCAIP-202ENST00000261368 CFAP53Q96M91 514 aa20.76■□□□□ 0.91
SNCAIP-202ENST00000261368 CGNL1Q0VF96 1302 aa20.75■□□□□ 0.91
SNCAIP-202ENST00000261368 TRAPPC8Q9Y2L5 1435 aa20.75■□□□□ 0.91
SNCAIP-202ENST00000261368 TCP11L2Q8N4U5 519 aa20.74■□□□□ 0.91
SNCAIP-202ENST00000261368 WWC1Q8IX03 1113 aa20.73■□□□□ 0.91
SNCAIP-202ENST00000261368 CARD14Q9BXL6 1004 aa20.73■□□□□ 0.91
SNCAIP-202ENST00000261368 SCAF11Q99590 1463 aaKnown RBP20.72■□□□□ 0.91
SNCAIP-202ENST00000261368 STK26Q9P289 416 aa20.71■□□□□ 0.91
SNCAIP-202ENST00000261368 TNNQ9UQP3 1299 aa20.71■□□□□ 0.91
SNCAIP-202ENST00000261368 MTHFSP49914 203 aa20.7■□□□□ 0.91
SNCAIP-202ENST00000261368 PRDM15P57071 1507 aaPredicted RBP20.7■□□□□ 0.9
SNCAIP-202ENST00000261368 NKTRP30414 1462 aaKnown RBP20.7■□□□□ 0.9
SNCAIP-202ENST00000261368 WDR7Q9Y4E6 1490 aa20.7■□□□□ 0.9
SNCAIP-202ENST00000261368 TTC37Q6PGP7 1564 aa20.7■□□□□ 0.9
SNCAIP-202ENST00000261368 SCAPERQ9BY12 1400 aa20.69■□□□□ 0.9
SNCAIP-202ENST00000261368 DUOX2Q9NRD8 1548 aa20.69■□□□□ 0.9
SNCAIP-202ENST00000261368 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
SNCAIP-202ENST00000261368 SEC24BO95487 1268 aa20.68■□□□□ 0.9
SNCAIP-202ENST00000261368 CDC42BPBQ9Y5S2 1711 aa20.68■□□□□ 0.9
SNCAIP-202ENST00000261368 SLC24A1O60721 1099 aa20.68■□□□□ 0.9
SNCAIP-202ENST00000261368 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.68■□□□□ 0.9
SNCAIP-202ENST00000261368 ZNF521Q96K83 1311 aa20.67■□□□□ 0.9
SNCAIP-202ENST00000261368 EIF2AK4Q9P2K8 1649 aaKnown RBP20.67■□□□□ 0.9
SNCAIP-202ENST00000261368 E9PCH4 1651 aa20.67■□□□□ 0.9
SNCAIP-202ENST00000261368 RUNDC1Q96C34 613 aa20.67■□□□□ 0.9
SNCAIP-202ENST00000261368 MAPK8IP3Q9UPT6 1336 aa20.66■□□□□ 0.9
SNCAIP-202ENST00000261368 GZF1Q9H116 711 aaPredicted RBP20.66■□□□□ 0.9
SNCAIP-202ENST00000261368 PDE3AQ14432 1141 aa20.66■□□□□ 0.9
SNCAIP-202ENST00000261368 PMFBP1Q8TBY8 1022 aa20.66■□□□□ 0.9
SNCAIP-202ENST00000261368 PREX2Q70Z35 1606 aa20.65■□□□□ 0.9
SNCAIP-202ENST00000261368 MFAP1P55081 439 aaKnown RBP20.65■□□□□ 0.9
SNCAIP-202ENST00000261368 SRPK2P78362 688 aaKnown RBP20.64■□□□□ 0.89
SNCAIP-202ENST00000261368 RWDD1Q9H446 243 aaPredicted RBP20.64■□□□□ 0.89
SNCAIP-202ENST00000261368 SMC4Q9NTJ3 1288 aa20.64■□□□□ 0.89
SNCAIP-202ENST00000261368 ITPRIPQ8IWB1 547 aa20.63■□□□□ 0.89
SNCAIP-202ENST00000261368 PDZRN3Q9UPQ7 1066 aa20.63■□□□□ 0.89
SNCAIP-202ENST00000261368 PLCH2O75038 1416 aa20.63■□□□□ 0.89
SNCAIP-202ENST00000261368 TSR2Q969E8 191 aaKnown RBP20.63■□□□□ 0.89
SNCAIP-202ENST00000261368 STAC3Q96MF2 364 aa20.63■□□□□ 0.89
SNCAIP-202ENST00000261368 NSD3Q9BZ95 1437 aa20.62■□□□□ 0.89
SNCAIP-202ENST00000261368 RARSP54136 660 aaKnown RBP20.61■□□□□ 0.89
SNCAIP-202ENST00000261368 MYH16Q9H6N6 1097 aa20.61■□□□□ 0.89
SNCAIP-202ENST00000261368 MAST1Q9Y2H9 1570 aa20.61■□□□□ 0.89
SNCAIP-202ENST00000261368 RLBP1P12271 317 aa20.61■□□□□ 0.89
SNCAIP-202ENST00000261368 PIK3C2GO75747 1445 aa20.6■□□□□ 0.89
SNCAIP-202ENST00000261368 CABP2Q9NPB3 220 aa20.6■□□□□ 0.89
SNCAIP-202ENST00000261368 PCDHB15Q9Y5E8 787 aa20.6■□□□□ 0.89
SNCAIP-202ENST00000261368 INSRP06213 1382 aa20.6■□□□□ 0.89
SNCAIP-202ENST00000261368 NPM1P06748 294 aaKnown RBP eCLIP20.6■□□□□ 0.89
SNCAIP-202ENST00000261368 POGKQ9P215 609 aa20.6■□□□□ 0.89
SNCAIP-202ENST00000261368 GGNBP2Q9H3C7 697 aa20.57■□□□□ 0.88
SNCAIP-202ENST00000261368 TRMT2AQ8IZ69 625 aaKnown RBP20.56■□□□□ 0.88
SNCAIP-202ENST00000261368 ZKSCAN2Q63HK3 967 aa20.56■□□□□ 0.88
SNCAIP-202ENST00000261368 HSP90AA1P07900 732 aaKnown RBP20.55■□□□□ 0.88
SNCAIP-202ENST00000261368 NGEFQ8N5V2 710 aa20.55■□□□□ 0.88
SNCAIP-202ENST00000261368 ERCC6L2Q5T890 1561 aa20.55■□□□□ 0.88
SNCAIP-202ENST00000261368 ATP10AO60312 1499 aa20.55■□□□□ 0.88
SNCAIP-202ENST00000261368 UNC13BO14795 1591 aa20.55■□□□□ 0.88
SNCAIP-202ENST00000261368 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
SNCAIP-202ENST00000261368 DZIP1LQ8IYY4 767 aaKnown RBP20.54■□□□□ 0.88
SNCAIP-202ENST00000261368 IQGAP3Q86VI3 1631 aa20.54■□□□□ 0.88
SNCAIP-202ENST00000261368 EXOSC9Q06265 439 aaKnown RBP20.53■□□□□ 0.88
SNCAIP-202ENST00000261368 STAG3Q9UJ98 1225 aa20.52■□□□□ 0.88
SNCAIP-202ENST00000261368 NOS1P29475 1434 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 164.8 ms