RNA–Protein interactions for RNA: ENST00000259229.6

CCDC115-201, Transcript of coiled-coil domain containing 115, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC115, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC115-201ENST00000259229 STAC3Q96MF2 364 aa25.28■■□□□ 1.64
CCDC115-201ENST00000259229 MYO3AQ8NEV4 1616 aa25.27■■□□□ 1.64
CCDC115-201ENST00000259229 RPGRIP1LQ68CZ1 1315 aa25.26■■□□□ 1.63
CCDC115-201ENST00000259229 NLRP1Q9C000 1473 aa25.25■■□□□ 1.63
CCDC115-201ENST00000259229 GPRASP1Q5JY77 1395 aa25.25■■□□□ 1.63
CCDC115-201ENST00000259229 ADGRF5Q8IZF2 1346 aa25.24■■□□□ 1.63
CCDC115-201ENST00000259229 PIK3C2GO75747 1445 aa25.23■■□□□ 1.63
CCDC115-201ENST00000259229 ZFYVE9O95405 1425 aa25.22■■□□□ 1.63
CCDC115-201ENST00000259229 ROCK2O75116 1388 aaKnown RBP25.2■■□□□ 1.62
CCDC115-201ENST00000259229 IQGAP1P46940 1657 aa25.19■■□□□ 1.62
CCDC115-201ENST00000259229 NBPF1Q3BBV0 1214 aa25.18■■□□□ 1.62
CCDC115-201ENST00000259229 HSPA5P11021 654 aaKnown RBP25.16■■□□□ 1.62
CCDC115-201ENST00000259229 PTPRMP28827 1452 aa25.16■■□□□ 1.62
CCDC115-201ENST00000259229 ZNF142P52746 1687 aaPredicted RBP25.16■■□□□ 1.62
CCDC115-201ENST00000259229 USP47Q96K76 1375 aa25.16■■□□□ 1.62
CCDC115-201ENST00000259229 HIRIP3Q9BW71 556 aaPredicted RBP25.15■■□□□ 1.62
CCDC115-201ENST00000259229 EIF4G2P78344 907 aaKnown RBP eCLIP25.15■■□□□ 1.62
CCDC115-201ENST00000259229 SETBP1Q9Y6X0 1596 aa25.15■■□□□ 1.62
CCDC115-201ENST00000259229 RIMS2Q9UQ26 1411 aa25.14■■□□□ 1.61
CCDC115-201ENST00000259229 CEP170BQ9Y4F5 1589 aaPredicted RBP25.13■■□□□ 1.61
CCDC115-201ENST00000259229 CARD11Q9BXL7 1154 aa25.13■■□□□ 1.61
CCDC115-201ENST00000259229 ADGRB1O14514 1584 aa25.13■■□□□ 1.61
CCDC115-201ENST00000259229 STAG3Q9UJ98 1225 aa25.12■■□□□ 1.61
CCDC115-201ENST00000259229 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
CCDC115-201ENST00000259229 NUTM2DQ5VT03 806 aaPredicted RBP25.11■■□□□ 1.61
CCDC115-201ENST00000259229 VGFO15240 615 aaPredicted RBP25.1■■□□□ 1.61
CCDC115-201ENST00000259229 SETD1AO15047 1707 aaKnown RBP25.1■■□□□ 1.61
CCDC115-201ENST00000259229 POLR1AO95602 1720 aaPredicted RBP25.1■■□□□ 1.61
CCDC115-201ENST00000259229 NRXN3Q9Y4C0 1643 aa25.1■■□□□ 1.61
CCDC115-201ENST00000259229 CFAP70Q5T0N1 1121 aa25.09■■□□□ 1.61
CCDC115-201ENST00000259229 AEBP2Q6ZN18 517 aaPredicted RBP25.09■■□□□ 1.61
CCDC115-201ENST00000259229 SLIT1O75093 1534 aa25.09■■□□□ 1.61
CCDC115-201ENST00000259229 ASXL1Q8IXJ9 1541 aa25.09■■□□□ 1.61
CCDC115-201ENST00000259229 ARHGAP23Q9P227 1491 aa25.09■■□□□ 1.61
CCDC115-201ENST00000259229 TMEM2Q9UHN6 1383 aa25.09■■□□□ 1.61
CCDC115-201ENST00000259229 C14orf93Q9H972 538 aaKnown RBP25.06■■□□□ 1.6
CCDC115-201ENST00000259229 SETD1BQ9UPS6 1966 aaKnown RBP25.05■■□□□ 1.6
CCDC115-201ENST00000259229 SCAF11Q99590 1463 aaKnown RBP25.05■■□□□ 1.6
CCDC115-201ENST00000259229 ALKQ9UM73 1620 aa25.04■■□□□ 1.6
CCDC115-201ENST00000259229 KDM4FA0A1W2PPD8 638 aa25.01■■□□□ 1.59
CCDC115-201ENST00000259229 ST20-MTHFSA0A0A6YYL1 179 aa24.98■■□□□ 1.59
CCDC115-201ENST00000259229 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.98■■□□□ 1.59
CCDC115-201ENST00000259229 ARHGEF28Q8N1W1 1705 aaKnown RBP24.98■■□□□ 1.59
CCDC115-201ENST00000259229 C11orf95C9JLR9 678 aaPredicted RBP24.97■■□□□ 1.59
CCDC115-201ENST00000259229 WASHC2AQ641Q2 1341 aa24.95■■□□□ 1.59
CCDC115-201ENST00000259229 LTKP29376 864 aa24.95■■□□□ 1.58
CCDC115-201ENST00000259229 THEMISQ8N1K5 641 aaPredicted RBP24.94■■□□□ 1.58
CCDC115-201ENST00000259229 PLEKHG1Q9ULL1 1385 aa24.93■■□□□ 1.58
CCDC115-201ENST00000259229 TMEM132EQ6IEE7 984 aa24.93■■□□□ 1.58
CCDC115-201ENST00000259229 CCDC7Q96M83 1385 aa24.93■■□□□ 1.58
CCDC115-201ENST00000259229 ADAMTS13Q76LX8 1427 aa24.92■■□□□ 1.58
CCDC115-201ENST00000259229 TESK2Q96S53 571 aa24.92■■□□□ 1.58
CCDC115-201ENST00000259229 DIEXFQ68CQ4 756 aaKnown RBP24.91■■□□□ 1.58
CCDC115-201ENST00000259229 SENP3Q9H4L4 574 aaPredicted RBP24.91■■□□□ 1.58
CCDC115-201ENST00000259229 MED14O60244 1454 aa24.9■■□□□ 1.58
CCDC115-201ENST00000259229 HDGFP51858 240 aaKnown RBP24.9■■□□□ 1.58
CCDC115-201ENST00000259229 EIF3AQ14152 1382 aaKnown RBP24.9■■□□□ 1.58
CCDC115-201ENST00000259229 QRICH2Q9H0J4 1663 aa24.89■■□□□ 1.58
CCDC115-201ENST00000259229 KIF7Q2M1P5 1343 aa24.89■■□□□ 1.58
CCDC115-201ENST00000259229 KNDC1Q76NI1 1749 aa24.87■■□□□ 1.57
CCDC115-201ENST00000259229 YTHDC2Q9H6S0 1430 aaKnown RBP24.87■■□□□ 1.57
CCDC115-201ENST00000259229 TXNDC2Q86VQ3 553 aa24.87■■□□□ 1.57
CCDC115-201ENST00000259229 DIP2AQ14689 1571 aa24.85■■□□□ 1.57
CCDC115-201ENST00000259229 METP08581 1390 aa24.85■■□□□ 1.57
CCDC115-201ENST00000259229 DISP3Q9P2K9 1392 aa24.85■■□□□ 1.57
CCDC115-201ENST00000259229 EID1Q9Y6B2 187 aa24.84■■□□□ 1.57
CCDC115-201ENST00000259229 DLC1Q96QB1 1528 aa24.84■■□□□ 1.57
CCDC115-201ENST00000259229 TRAK1Q9UPV9 953 aa24.83■■□□□ 1.57
CCDC115-201ENST00000259229 SBNO2Q9Y2G9 1366 aa24.83■■□□□ 1.57
CCDC115-201ENST00000259229 LRPPRCP42704 1394 aaKnown RBP24.81■■□□□ 1.56
CCDC115-201ENST00000259229 DDX10Q13206 875 aaKnown RBP24.81■■□□□ 1.56
CCDC115-201ENST00000259229 CPS1P31327 1500 aa24.8■■□□□ 1.56
CCDC115-201ENST00000259229 TECPR2O15040 1411 aa24.79■■□□□ 1.56
CCDC115-201ENST00000259229 CENPJQ9HC77 1338 aaPredicted RBP24.79■■□□□ 1.56
CCDC115-201ENST00000259229 ABCC11Q96J66 1382 aa24.77■■□□□ 1.56
CCDC115-201ENST00000259229 MYOM1P52179 1685 aa24.76■■□□□ 1.55
CCDC115-201ENST00000259229 LMTK3Q96Q04 1460 aa24.75■■□□□ 1.55
CCDC115-201ENST00000259229 STK26Q9P289 416 aa24.75■■□□□ 1.55
CCDC115-201ENST00000259229 PTPRUQ92729 1446 aa24.75■■□□□ 1.55
CCDC115-201ENST00000259229 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
CCDC115-201ENST00000259229 TMF1P82094 1093 aa24.74■■□□□ 1.55
CCDC115-201ENST00000259229 ANKLE2Q86XL3 938 aa24.74■■□□□ 1.55
CCDC115-201ENST00000259229 TULP4Q9NRJ4 1543 aa24.74■■□□□ 1.55
CCDC115-201ENST00000259229 SLC26A8Q96RN1 970 aa24.72■■□□□ 1.55
CCDC115-201ENST00000259229 TBX22Q9Y458 520 aa24.72■■□□□ 1.55
CCDC115-201ENST00000259229 BCANQ96GW7 911 aa24.72■■□□□ 1.55
CCDC115-201ENST00000259229 NPHP4O75161 1426 aaPredicted RBP24.69■■□□□ 1.54
CCDC115-201ENST00000259229 FAM135BQ49AJ0 1406 aa24.69■■□□□ 1.54
CCDC115-201ENST00000259229 PLEKHH1Q9ULM0 1364 aa24.69■■□□□ 1.54
CCDC115-201ENST00000259229 PRAM1Q96QH2 718 aa24.68■■□□□ 1.54
CCDC115-201ENST00000259229 CHD2O14647 1828 aaKnown RBP24.68■■□□□ 1.54
CCDC115-201ENST00000259229 PIK3R4Q99570 1358 aa24.66■■□□□ 1.54
CCDC115-201ENST00000259229 ROBO2Q9HCK4 1378 aa24.66■■□□□ 1.54
CCDC115-201ENST00000259229 POLR3GLQ9BT43 218 aa24.65■■□□□ 1.54
CCDC115-201ENST00000259229 NCKAP5LQ9HCH0 1330 aa24.64■■□□□ 1.54
CCDC115-201ENST00000259229 PTCH1Q13635 1447 aa24.64■■□□□ 1.54
CCDC115-201ENST00000259229 SLC24A1O60721 1099 aa24.64■■□□□ 1.53
CCDC115-201ENST00000259229 SIRT1Q96EB6 747 aa24.64■■□□□ 1.53
CCDC115-201ENST00000259229 STRCQ7RTU9 1775 aa24.63■■□□□ 1.53
CCDC115-201ENST00000259229 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms