RNA–Protein interactions for RNA: ENST00000258613.4

THSD1-201, Transcript of thrombospondin type 1 domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THSD1, Length 2,962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THSD1-201ENST00000258613 BRD4O60885 1362 aaPredicted RBP17.68■□□□□ 0.42
THSD1-201ENST00000258613 EFCAB6Q5THR3 1501 aa17.68■□□□□ 0.42
THSD1-201ENST00000258613 FAM69CQ0P6D2 419 aa17.68■□□□□ 0.42
THSD1-201ENST00000258613 MROH2AA6NES4 1674 aa17.67■□□□□ 0.42
THSD1-201ENST00000258613 YEATS2Q9ULM3 1422 aa17.67■□□□□ 0.42
THSD1-201ENST00000258613 ABCA6Q8N139 1617 aa17.67■□□□□ 0.42
THSD1-201ENST00000258613 SCAF11Q99590 1463 aaKnown RBP17.66■□□□□ 0.42
THSD1-201ENST00000258613 KNSTRNQ9Y448 316 aa17.66■□□□□ 0.42
THSD1-201ENST00000258613 LAMC1P11047 1609 aa17.66■□□□□ 0.42
THSD1-201ENST00000258613 CDCA7LQ96GN5 454 aa17.66■□□□□ 0.42
THSD1-201ENST00000258613 NUDCQ9Y266 331 aa17.65■□□□□ 0.42
THSD1-201ENST00000258613 LRPPRCP42704 1394 aaKnown RBP17.65■□□□□ 0.42
THSD1-201ENST00000258613 MLH3Q9UHC1 1453 aa17.64■□□□□ 0.41
THSD1-201ENST00000258613 IQGAP1P46940 1657 aa17.64■□□□□ 0.41
THSD1-201ENST00000258613 KIF1BO60333 1816 aa17.64■□□□□ 0.41
THSD1-201ENST00000258613 HECW2Q9P2P5 1572 aa17.64■□□□□ 0.41
THSD1-201ENST00000258613 SAFB2Q14151 953 aaKnown RBP eCLIP17.63■□□□□ 0.41
THSD1-201ENST00000258613 AMER1Q5JTC6 1135 aaPredicted RBP17.61■□□□□ 0.41
THSD1-201ENST00000258613 FBXO31Q5XUX0 539 aaPredicted RBP17.61■□□□□ 0.41
THSD1-201ENST00000258613 TSPOAP1O95153 1857 aa17.61■□□□□ 0.41
THSD1-201ENST00000258613 ADAMTS8Q9UP79 889 aa17.61■□□□□ 0.41
THSD1-201ENST00000258613 IDI1Q13907 227 aa17.6■□□□□ 0.41
THSD1-201ENST00000258613 SMG6Q86US8 1419 aaKnown RBP17.6■□□□□ 0.41
THSD1-201ENST00000258613 MLECQ14165 292 aa17.6■□□□□ 0.41
THSD1-201ENST00000258613 MAP3K4Q9Y6R4 1608 aa17.6■□□□□ 0.41
THSD1-201ENST00000258613 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
THSD1-201ENST00000258613 CARD14Q9BXL6 1004 aa17.59■□□□□ 0.41
THSD1-201ENST00000258613 SIGLEC1Q9BZZ2 1709 aa17.58■□□□□ 0.4
THSD1-201ENST00000258613 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
THSD1-201ENST00000258613 PPP4R2Q9NY27 417 aa17.58■□□□□ 0.4
THSD1-201ENST00000258613 ABCC3O15438 1527 aa17.58■□□□□ 0.4
THSD1-201ENST00000258613 STK26Q9P289 416 aa17.57■□□□□ 0.4
THSD1-201ENST00000258613 SLC12A5Q9H2X9 1139 aa17.56■□□□□ 0.4
THSD1-201ENST00000258613 STAC3Q96MF2 364 aa17.56■□□□□ 0.4
THSD1-201ENST00000258613 DIP2CQ9Y2E4 1556 aa17.56■□□□□ 0.4
THSD1-201ENST00000258613 NEO1Q92859 1461 aa17.56■□□□□ 0.4
THSD1-201ENST00000258613 CFAP74Q9C0B2 1584 aa17.55■□□□□ 0.4
THSD1-201ENST00000258613 RBM19Q9Y4C8 960 aaKnown RBP17.55■□□□□ 0.4
THSD1-201ENST00000258613 EIF3AQ14152 1382 aaKnown RBP17.55■□□□□ 0.4
THSD1-201ENST00000258613 ERVK-7P63135 1459 aa17.55■□□□□ 0.4
THSD1-201ENST00000258613 CCDC146Q8IYE0 955 aa17.55■□□□□ 0.4
THSD1-201ENST00000258613 LMTK2Q8IWU2 1503 aa17.54■□□□□ 0.4
THSD1-201ENST00000258613 CDCA8Q53HL2 280 aa17.54■□□□□ 0.4
THSD1-201ENST00000258613 C14orf93Q9H972 538 aaKnown RBP17.54■□□□□ 0.4
THSD1-201ENST00000258613 RIMBP3CA6NJZ7 1639 aa17.54■□□□□ 0.4
THSD1-201ENST00000258613 RIMBP3BA6NNM3 1639 aa17.54■□□□□ 0.4
THSD1-201ENST00000258613 RIMBP3Q9UFD9 1639 aa17.54■□□□□ 0.4
THSD1-201ENST00000258613 CENPJQ9HC77 1338 aaPredicted RBP17.54■□□□□ 0.4
THSD1-201ENST00000258613 ADGRB3O60242 1522 aa17.53■□□□□ 0.4
THSD1-201ENST00000258613 MYOM2P54296 1465 aa17.53■□□□□ 0.4
THSD1-201ENST00000258613 RICTORQ6R327 1708 aa17.52■□□□□ 0.4
THSD1-201ENST00000258613 IFT172Q9UG01 1749 aa17.52■□□□□ 0.4
THSD1-201ENST00000258613 PLIN1O60240 522 aa17.52■□□□□ 0.39
THSD1-201ENST00000258613 MYOM1P52179 1685 aa17.51■□□□□ 0.39
THSD1-201ENST00000258613 CAMSAP1Q5T5Y3 1602 aa17.5■□□□□ 0.39
THSD1-201ENST00000258613 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
THSD1-201ENST00000258613 SYNMO15061 1565 aa17.49■□□□□ 0.39
THSD1-201ENST00000258613 WDR43Q15061 677 aaKnown RBP eCLIP17.49■□□□□ 0.39
THSD1-201ENST00000258613 PPLO60437 1756 aa17.48■□□□□ 0.39
THSD1-201ENST00000258613 NRXN1Q9ULB1 1477 aa17.48■□□□□ 0.39
THSD1-201ENST00000258613 CABP2Q9NPB3 220 aa17.48■□□□□ 0.39
THSD1-201ENST00000258613 RCAN3Q9UKA8 241 aa17.48■□□□□ 0.39
THSD1-201ENST00000258613 ASXL1Q8IXJ9 1541 aa17.47■□□□□ 0.39
THSD1-201ENST00000258613 KIAA1210Q9ULL0 1709 aa17.47■□□□□ 0.39
THSD1-201ENST00000258613 KDM5AP29375 1690 aaKnown RBP17.46■□□□□ 0.39
THSD1-201ENST00000258613 MYO5BQ9ULV0 1848 aa17.46■□□□□ 0.39
THSD1-201ENST00000258613 RNF123Q5XPI4 1314 aa17.46■□□□□ 0.39
THSD1-201ENST00000258613 EXOC6Q8TAG9 804 aa17.46■□□□□ 0.38
THSD1-201ENST00000258613 VGFO15240 615 aaPredicted RBP17.45■□□□□ 0.38
THSD1-201ENST00000258613 CCDC136Q96JN2 1154 aa17.45■□□□□ 0.38
THSD1-201ENST00000258613 STAG3Q9UJ98 1225 aa17.44■□□□□ 0.38
THSD1-201ENST00000258613 PLEKHH1Q9ULM0 1364 aa17.44■□□□□ 0.38
THSD1-201ENST00000258613 ADGRB1O14514 1584 aa17.44■□□□□ 0.38
THSD1-201ENST00000258613 RRP1P56182 461 aaKnown RBP17.43■□□□□ 0.38
THSD1-201ENST00000258613 ERICH6BQ5W0A0 696 aa17.43■□□□□ 0.38
THSD1-201ENST00000258613 NEURL4Q96JN8 1562 aa17.42■□□□□ 0.38
THSD1-201ENST00000258613 MINK1Q8N4C8 1332 aaPredicted RBP17.42■□□□□ 0.38
THSD1-201ENST00000258613 APAF1O14727 1248 aa17.42■□□□□ 0.38
THSD1-201ENST00000258613 BLMP54132 1417 aaPredicted RBP17.42■□□□□ 0.38
THSD1-201ENST00000258613 DIP2BQ9P265 1576 aa17.41■□□□□ 0.38
THSD1-201ENST00000258613 NSD3Q9BZ95 1437 aa17.41■□□□□ 0.38
THSD1-201ENST00000258613 RPGRIP1LQ68CZ1 1315 aa17.41■□□□□ 0.38
THSD1-201ENST00000258613 SPINK5Q9NQ38 1064 aaPredicted RBP17.4■□□□□ 0.38
THSD1-201ENST00000258613 NEXMIFQ5QGS0 1516 aa17.4■□□□□ 0.38
THSD1-201ENST00000258613 NEUROD2Q15784 382 aa17.39■□□□□ 0.37
THSD1-201ENST00000258613 DMRT2Q9Y5R5 561 aa17.39■□□□□ 0.37
THSD1-201ENST00000258613 QRICH2Q9H0J4 1663 aa17.39■□□□□ 0.37
THSD1-201ENST00000258613 MORC1Q86VD1 984 aa17.39■□□□□ 0.37
THSD1-201ENST00000258613 SLC52A1Q9NWF4 448 aa17.39■□□□□ 0.37
THSD1-201ENST00000258613 PIK3C2BO00750 1634 aa17.38■□□□□ 0.37
THSD1-201ENST00000258613 PLPPR3Q6T4P5 718 aa17.38■□□□□ 0.37
THSD1-201ENST00000258613 SRPK2P78362 688 aaKnown RBP17.38■□□□□ 0.37
THSD1-201ENST00000258613 C20orf194Q5TEA3 1177 aa17.38■□□□□ 0.37
THSD1-201ENST00000258613 PRAM1Q96QH2 718 aa17.38■□□□□ 0.37
THSD1-201ENST00000258613 SKAP1Q86WV1 359 aa17.37■□□□□ 0.37
THSD1-201ENST00000258613 RRP7AQ9Y3A4 280 aaKnown RBP17.37■□□□□ 0.37
THSD1-201ENST00000258613 GLI2P10070 1586 aa17.36■□□□□ 0.37
THSD1-201ENST00000258613 PDE3BQ13370 1112 aa17.36■□□□□ 0.37
THSD1-201ENST00000258613 SETBP1Q9Y6X0 1596 aa17.35■□□□□ 0.37
THSD1-201ENST00000258613 WAPLQ7Z5K2 1190 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms