RNA–Protein interactions for RNA: ENST00000258104.7

DYSF-201, Transcript of dysferlin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene DYSF, Length 6,796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DYSF-201ENST00000258104 IPO7O95373 1038 aaKnown RBP18.31■□□□□ 0.52
DYSF-201ENST00000258104 C1orf141Q5JVX7 400 aa18.31■□□□□ 0.52
DYSF-201ENST00000258104 TRIM34Q9BYJ4 488 aa18.31■□□□□ 0.52
DYSF-201ENST00000258104 C9orf78Q9NZ63 289 aaPredicted RBP18.3■□□□□ 0.52
DYSF-201ENST00000258104 R3HCC1Q9Y3T6 440 aaKnown RBP18.3■□□□□ 0.52
DYSF-201ENST00000258104 RUFY1Q96T51 708 aa18.3■□□□□ 0.52
DYSF-201ENST00000258104 SASS6Q6UVJ0 657 aa18.3■□□□□ 0.52
DYSF-201ENST00000258104 CPLX1O14810 134 aa18.3■□□□□ 0.52
DYSF-201ENST00000258104 ABCC8Q09428 1581 aa18.3■□□□□ 0.52
DYSF-201ENST00000258104 CTDP1Q9Y5B0 961 aaPredicted RBP18.29■□□□□ 0.52
DYSF-201ENST00000258104 RB1CC1Q8TDY2 1594 aa18.28■□□□□ 0.52
DYSF-201ENST00000258104 ST20-MTHFSA0A0A6YYL1 179 aa18.28■□□□□ 0.52
DYSF-201ENST00000258104 IFIT2P09913 472 aaKnown RBP18.28■□□□□ 0.52
DYSF-201ENST00000258104 ANKRD30AQ9BXX3 1397 aa18.28■□□□□ 0.52
DYSF-201ENST00000258104 FAM43AQ8N2R8 423 aa18.28■□□□□ 0.52
DYSF-201ENST00000258104 PDILTQ8N807 584 aa18.28■□□□□ 0.52
DYSF-201ENST00000258104 ANKRD20A12PQ8NF67 263 aa18.27■□□□□ 0.52
DYSF-201ENST00000258104 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.51
DYSF-201ENST00000258104 FYB1O15117 783 aa18.26■□□□□ 0.51
DYSF-201ENST00000258104 MNS1Q8NEH6 495 aa18.26■□□□□ 0.51
DYSF-201ENST00000258104 VPS8Q8N3P4 1428 aa18.26■□□□□ 0.51
DYSF-201ENST00000258104 MTMR7Q9Y216 660 aa18.26■□□□□ 0.51
DYSF-201ENST00000258104 ZKSCAN1P17029 563 aaPredicted RBP18.26■□□□□ 0.51
DYSF-201ENST00000258104 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.26■□□□□ 0.51
DYSF-201ENST00000258104 NOL10Q9BSC4 688 aaKnown RBP18.26■□□□□ 0.51
DYSF-201ENST00000258104 E9PSI1 815 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 APAF1O14727 1248 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 AK7Q96M32 723 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 SMC3Q9UQE7 1217 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 EVA1CP58658 441 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 RUFY2Q8WXA3 655 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 CCDC47Q96A33 483 aaKnown RBP18.25■□□□□ 0.51
DYSF-201ENST00000258104 AMOTL1Q8IY63 956 aa18.25■□□□□ 0.51
DYSF-201ENST00000258104 RNF214Q8ND24 703 aa18.24■□□□□ 0.51
DYSF-201ENST00000258104 EID1Q9Y6B2 187 aa18.24■□□□□ 0.51
DYSF-201ENST00000258104 VPS37DQ86XT2 251 aa18.24■□□□□ 0.51
DYSF-201ENST00000258104 CHMP5Q9NZZ3 219 aa18.24■□□□□ 0.51
DYSF-201ENST00000258104 REC8O95072 547 aa18.24■□□□□ 0.51
DYSF-201ENST00000258104 CCDC27Q2M243 656 aa18.24■□□□□ 0.51
DYSF-201ENST00000258104 WASHC2CQ9Y4E1 1318 aa18.23■□□□□ 0.51
DYSF-201ENST00000258104 CPLX2Q6PUV4 134 aaKnown RBP18.23■□□□□ 0.51
DYSF-201ENST00000258104 PHLDB1Q86UU1 1377 aa18.23■□□□□ 0.51
DYSF-201ENST00000258104 SYTL4Q96C24 671 aaPredicted RBP18.23■□□□□ 0.51
DYSF-201ENST00000258104 MAP7D2Q96T17 732 aa18.23■□□□□ 0.51
DYSF-201ENST00000258104 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.23■□□□□ 0.51
DYSF-201ENST00000258104 DHX37Q8IY37 1157 aaKnown RBP18.23■□□□□ 0.51
DYSF-201ENST00000258104 COG3Q96JB2 828 aa18.23■□□□□ 0.51
DYSF-201ENST00000258104 HOOK1Q9UJC3 728 aaKnown RBP18.22■□□□□ 0.51
DYSF-201ENST00000258104 FMN1Q68DA7 1419 aa18.22■□□□□ 0.51
DYSF-201ENST00000258104 LNPKQ9C0E8 428 aa18.22■□□□□ 0.51
DYSF-201ENST00000258104 TEFQ10587 303 aa18.22■□□□□ 0.51
DYSF-201ENST00000258104 CT47A1Q5JQC4 288 aaPredicted RBP18.21■□□□□ 0.51
DYSF-201ENST00000258104 ZFYVE27Q5T4F4 411 aa18.21■□□□□ 0.51
DYSF-201ENST00000258104 KRI1Q8N9T8 703 aaKnown RBP18.21■□□□□ 0.51
DYSF-201ENST00000258104 NEXNQ0ZGT2 675 aa18.21■□□□□ 0.5
DYSF-201ENST00000258104 TRDNQ13061 729 aa18.21■□□□□ 0.5
DYSF-201ENST00000258104 TTC5Q8N0Z6 440 aa18.21■□□□□ 0.5
DYSF-201ENST00000258104 CAGE1Q8TC20 777 aa18.21■□□□□ 0.5
DYSF-201ENST00000258104 RBM10P98175 930 aaKnown RBP18.2■□□□□ 0.5
DYSF-201ENST00000258104 ERICH2A1L162 156 aa18.19■□□□□ 0.5
DYSF-201ENST00000258104 CGNL1Q0VF96 1302 aa18.19■□□□□ 0.5
DYSF-201ENST00000258104 MINK1Q8N4C8 1332 aaPredicted RBP18.19■□□□□ 0.5
DYSF-201ENST00000258104 HSP90AB2PQ58FF8 381 aa18.19■□□□□ 0.5
DYSF-201ENST00000258104 RIPK4P57078 832 aa18.19■□□□□ 0.5
DYSF-201ENST00000258104 CCDC43Q96MW1 224 aaKnown RBP18.19■□□□□ 0.5
DYSF-201ENST00000258104 NOM1Q5C9Z4 860 aaKnown RBP18.18■□□□□ 0.5
DYSF-201ENST00000258104 ODF2Q5BJF6 829 aa18.18■□□□□ 0.5
DYSF-201ENST00000258104 PLCD4Q9BRC7 762 aa18.18■□□□□ 0.5
DYSF-201ENST00000258104 ARGLU1Q9NWB6 273 aaPredicted RBP18.18■□□□□ 0.5
DYSF-201ENST00000258104 DZIP1LQ8IYY4 767 aaKnown RBP18.18■□□□□ 0.5
DYSF-201ENST00000258104 DDX19BQ9UMR2 479 aa18.18■□□□□ 0.5
DYSF-201ENST00000258104 NFKBIBQ15653 356 aa18.18■□□□□ 0.5
DYSF-201ENST00000258104 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.17■□□□□ 0.5
DYSF-201ENST00000258104 CHMP4CQ96CF2 233 aa18.17■□□□□ 0.5
DYSF-201ENST00000258104 FKBP5Q13451 457 aaPredicted RBP18.17■□□□□ 0.5
DYSF-201ENST00000258104 EPS15P42566 896 aa18.17■□□□□ 0.5
DYSF-201ENST00000258104 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
DYSF-201ENST00000258104 G3BP1Q13283 466 aaKnown RBP eCLIP18.17■□□□□ 0.5
DYSF-201ENST00000258104 EFCAB2Q5VUJ9 269 aa18.17■□□□□ 0.5
DYSF-201ENST00000258104 INTS3Q68E01 1043 aaKnown RBP18.17■□□□□ 0.5
DYSF-201ENST00000258104 C22orf23Q9BZE7 217 aa18.17■□□□□ 0.5
DYSF-201ENST00000258104 CCDC73Q6ZRK6 1079 aa18.16■□□□□ 0.5
DYSF-201ENST00000258104 LRRFIP1Q32MZ4 808 aaKnown RBP18.16■□□□□ 0.5
DYSF-201ENST00000258104 RNF20Q5VTR2 975 aa18.16■□□□□ 0.5
DYSF-201ENST00000258104 HSP90B2PQ58FF3 399 aa18.15■□□□□ 0.5
DYSF-201ENST00000258104 ZBED9Q6R2W3 1325 aa18.15■□□□□ 0.5
DYSF-201ENST00000258104 AIMP1Q12904 312 aaKnown RBP18.15■□□□□ 0.5
DYSF-201ENST00000258104 PANK1Q8TE04 598 aa18.15■□□□□ 0.5
DYSF-201ENST00000258104 NEUROD6Q96NK8 337 aa18.15■□□□□ 0.5
DYSF-201ENST00000258104 FANCIQ9NVI1 1328 aa18.15■□□□□ 0.5
DYSF-201ENST00000258104 H0YHG0 523 aa18.15■□□□□ 0.5
DYSF-201ENST00000258104 HMOX1P09601 288 aa18.14■□□□□ 0.49
DYSF-201ENST00000258104 OLFM4Q6UX06 510 aa18.14■□□□□ 0.49
DYSF-201ENST00000258104 PRKRIP1Q9H875 184 aaPredicted RBP18.14■□□□□ 0.49
DYSF-201ENST00000258104 WASHC4Q2M389 1173 aa18.13■□□□□ 0.49
DYSF-201ENST00000258104 SPC24Q8NBT2 197 aa18.13■□□□□ 0.49
DYSF-201ENST00000258104 SMC2O95347 1197 aa18.13■□□□□ 0.49
DYSF-201ENST00000258104 BRPF1P55201 1214 aaPredicted RBP18.13■□□□□ 0.49
DYSF-201ENST00000258104 CAVIN1Q6NZI2 390 aaKnown RBP18.13■□□□□ 0.49
DYSF-201ENST00000258104 ACBD3Q9H3P7 528 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms