RNA–Protein interactions for RNA: ENST00000254231.4

LIN28A-201, Transcript of lin-28 homolog A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28A, Length 3,458 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28A-201ENST00000254231 LTKP29376 864 aa15.7■□□□□ 0.1
LIN28A-201ENST00000254231 PRDM15P57071 1507 aaPredicted RBP15.69■□□□□ 0.1
LIN28A-201ENST00000254231 TESK2Q96S53 571 aa15.69■□□□□ 0.1
LIN28A-201ENST00000254231 PRAG1Q86YV5 1406 aa15.69■□□□□ 0.1
LIN28A-201ENST00000254231 U2SURPO15042 1029 aaKnown RBP15.69■□□□□ 0.1
LIN28A-201ENST00000254231 CABP1Q9NZU7 370 aa15.69■□□□□ 0.1
LIN28A-201ENST00000254231 CROCC2H7BZ55 1655 aa15.68■□□□□ 0.1
LIN28A-201ENST00000254231 MORC1Q86VD1 984 aa15.67■□□□□ 0.1
LIN28A-201ENST00000254231 RRP7AQ9Y3A4 280 aaKnown RBP15.67■□□□□ 0.1
LIN28A-201ENST00000254231 SUPT16HQ9Y5B9 1047 aaKnown RBP15.67■□□□□ 0.1
LIN28A-201ENST00000254231 KIDINS220Q9ULH0 1771 aa15.67■□□□□ 0.1
LIN28A-201ENST00000254231 A0A0G2JS52 829 aa15.67■□□□□ 0.1
LIN28A-201ENST00000254231 NEFLP07196 543 aa15.67■□□□□ 0.1
LIN28A-201ENST00000254231 MLH3Q9UHC1 1453 aa15.66■□□□□ 0.1
LIN28A-201ENST00000254231 LTV1Q96GA3 475 aaPredicted RBP15.66■□□□□ 0.1
LIN28A-201ENST00000254231 DIP2BQ9P265 1576 aa15.66■□□□□ 0.1
LIN28A-201ENST00000254231 WDR43Q15061 677 aaKnown RBP eCLIP15.65■□□□□ 0.1
LIN28A-201ENST00000254231 CDK19Q9BWU1 502 aa15.65■□□□□ 0.1
LIN28A-201ENST00000254231 MAST1Q9Y2H9 1570 aa15.64■□□□□ 0.09
LIN28A-201ENST00000254231 SRCAPQ6ZRS2 3230 aa15.64■□□□□ 0.09
LIN28A-201ENST00000254231 C14orf93Q9H972 538 aaKnown RBP15.64■□□□□ 0.09
LIN28A-201ENST00000254231 HECW2Q9P2P5 1572 aa15.63■□□□□ 0.09
LIN28A-201ENST00000254231 CDCA8Q53HL2 280 aa15.63■□□□□ 0.09
LIN28A-201ENST00000254231 HDGFP51858 240 aaKnown RBP15.62■□□□□ 0.09
LIN28A-201ENST00000254231 ZRANB1Q9UGI0 708 aa15.62■□□□□ 0.09
LIN28A-201ENST00000254231 ABCA6Q8N139 1617 aa15.61■□□□□ 0.09
LIN28A-201ENST00000254231 NGDNQ8NEJ9 315 aaKnown RBP15.6■□□□□ 0.09
LIN28A-201ENST00000254231 AMOTL2Q9Y2J4 779 aa15.6■□□□□ 0.09
LIN28A-201ENST00000254231 TNRQ92752 1358 aa15.6■□□□□ 0.09
LIN28A-201ENST00000254231 CNTLNQ9NXG0 1405 aa15.6■□□□□ 0.09
LIN28A-201ENST00000254231 THEMISQ8N1K5 641 aaPredicted RBP15.59■□□□□ 0.09
LIN28A-201ENST00000254231 KTN1Q86UP2 1357 aaKnown RBP15.59■□□□□ 0.09
LIN28A-201ENST00000254231 LAS1LQ9Y4W2 734 aaKnown RBP15.59■□□□□ 0.09
LIN28A-201ENST00000254231 EVC2Q86UK5 1308 aa15.59■□□□□ 0.09
LIN28A-201ENST00000254231 CEP152O94986 1710 aa15.59■□□□□ 0.09
LIN28A-201ENST00000254231 SPATA31E1Q6ZUB1 1445 aa15.58■□□□□ 0.08
LIN28A-201ENST00000254231 CARD14Q9BXL6 1004 aa15.58■□□□□ 0.08
LIN28A-201ENST00000254231 PLEKHH1Q9ULM0 1364 aa15.57■□□□□ 0.08
LIN28A-201ENST00000254231 DDX17Q92841 729 aaKnown RBP15.57■□□□□ 0.08
LIN28A-201ENST00000254231 EIF3AQ14152 1382 aaKnown RBP15.57■□□□□ 0.08
LIN28A-201ENST00000254231 E9PCH4 1651 aa15.56■□□□□ 0.08
LIN28A-201ENST00000254231 UHRF1BP1Q6BDS2 1440 aa15.56■□□□□ 0.08
LIN28A-201ENST00000254231 DIP2CQ9Y2E4 1556 aa15.55■□□□□ 0.08
LIN28A-201ENST00000254231 U2AF1L5P0DN76 240 aaPredicted RBP15.55■□□□□ 0.08
LIN28A-201ENST00000254231 U2AF1Q01081 240 aaKnown RBP eCLIP15.55■□□□□ 0.08
LIN28A-201ENST00000254231 PLXNC1O60486 1568 aa15.55■□□□□ 0.08
LIN28A-201ENST00000254231 FRMPD1Q5SYB0 1578 aa15.55■□□□□ 0.08
LIN28A-201ENST00000254231 KCNA6P17658 529 aa15.55■□□□□ 0.08
LIN28A-201ENST00000254231 ADAMTS8Q9UP79 889 aa15.55■□□□□ 0.08
LIN28A-201ENST00000254231 ABCC3O15438 1527 aa15.54■□□□□ 0.08
LIN28A-201ENST00000254231 CCER2I3L3R5 266 aa15.54■□□□□ 0.08
LIN28A-201ENST00000254231 INO80Q9ULG1 1556 aaPredicted RBP15.54■□□□□ 0.08
LIN28A-201ENST00000254231 CLTCL1P53675 1640 aa15.54■□□□□ 0.08
LIN28A-201ENST00000254231 RRS1Q15050 365 aaKnown RBP15.53■□□□□ 0.08
LIN28A-201ENST00000254231 ANKLE2Q86XL3 938 aa15.53■□□□□ 0.08
LIN28A-201ENST00000254231 CDCA7LQ96GN5 454 aa15.53■□□□□ 0.08
LIN28A-201ENST00000254231 MTHFSP49914 203 aa15.53■□□□□ 0.08
LIN28A-201ENST00000254231 RIMS2Q9UQ26 1411 aa15.53■□□□□ 0.08
LIN28A-201ENST00000254231 HDGFL2Q7Z4V5 671 aaPredicted RBP15.53■□□□□ 0.08
LIN28A-201ENST00000254231 ZNF428Q96B54 188 aa15.52■□□□□ 0.08
LIN28A-201ENST00000254231 METP08581 1390 aa15.52■□□□□ 0.08
LIN28A-201ENST00000254231 HMOX1P09601 288 aa15.52■□□□□ 0.07
LIN28A-201ENST00000254231 ESCO1Q5FWF5 840 aa15.52■□□□□ 0.07
LIN28A-201ENST00000254231 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.51■□□□□ 0.07
LIN28A-201ENST00000254231 ARAP3Q8WWN8 1544 aa15.51■□□□□ 0.07
LIN28A-201ENST00000254231 RALGAPBQ86X10 1494 aa15.51■□□□□ 0.07
LIN28A-201ENST00000254231 NME9Q86XW9 330 aa15.51■□□□□ 0.07
LIN28A-201ENST00000254231 HAP1P54257 671 aaPredicted RBP15.51■□□□□ 0.07
LIN28A-201ENST00000254231 NLRP13Q86W25 1043 aa15.51■□□□□ 0.07
LIN28A-201ENST00000254231 PROSER2Q86WR7 435 aaPredicted RBP15.51■□□□□ 0.07
LIN28A-201ENST00000254231 PPRC1Q5VV67 1664 aaKnown RBP15.5■□□□□ 0.07
LIN28A-201ENST00000254231 PPP2R1AP30153 589 aa15.5■□□□□ 0.07
LIN28A-201ENST00000254231 NUDT16Q96DE0 195 aaKnown RBP15.5■□□□□ 0.07
LIN28A-201ENST00000254231 APAF1O14727 1248 aa15.49■□□□□ 0.07
LIN28A-201ENST00000254231 FOXO3O43524 673 aa15.49■□□□□ 0.07
LIN28A-201ENST00000254231 RPGRIP1LQ68CZ1 1315 aa15.49■□□□□ 0.07
LIN28A-201ENST00000254231 TCERG1O14776 1098 aaKnown RBP15.49■□□□□ 0.07
LIN28A-201ENST00000254231 MYBBP1AQ9BQG0 1328 aaKnown RBP15.49■□□□□ 0.07
LIN28A-201ENST00000254231 PTPRTO14522 1441 aa15.49■□□□□ 0.07
LIN28A-201ENST00000254231 TERF2IPQ9NYB0 399 aa15.49■□□□□ 0.07
LIN28A-201ENST00000254231 IQGAP3Q86VI3 1631 aa15.49■□□□□ 0.07
LIN28A-201ENST00000254231 PER1O15534 1290 aaPredicted RBP15.48■□□□□ 0.07
LIN28A-201ENST00000254231 KDM5DQ9BY66 1539 aa15.47■□□□□ 0.07
LIN28A-201ENST00000254231 SCAF11Q99590 1463 aaKnown RBP15.47■□□□□ 0.07
LIN28A-201ENST00000254231 EFCAB6Q5THR3 1501 aa15.47■□□□□ 0.07
LIN28A-201ENST00000254231 ELL2O00472 640 aaPredicted RBP15.47■□□□□ 0.07
LIN28A-201ENST00000254231 PLIN1O60240 522 aa15.47■□□□□ 0.07
LIN28A-201ENST00000254231 USP35Q9P2H5 1018 aa15.47■□□□□ 0.07
LIN28A-201ENST00000254231 MAP3K4Q9Y6R4 1608 aa15.47■□□□□ 0.07
LIN28A-201ENST00000254231 RALBP1Q15311 655 aa15.47■□□□□ 0.07
LIN28A-201ENST00000254231 UNC13BO14795 1591 aa15.46■□□□□ 0.07
LIN28A-201ENST00000254231 BCL2L13Q9BXK5 485 aa15.46■□□□□ 0.07
LIN28A-201ENST00000254231 KDM5CP41229 1560 aa15.46■□□□□ 0.06
LIN28A-201ENST00000254231 PNISRQ8TF01 805 aaKnown RBP15.45■□□□□ 0.06
LIN28A-201ENST00000254231 PIP4K2BP78356 416 aa15.45■□□□□ 0.06
LIN28A-201ENST00000254231 GOLGB1Q14789 3259 aaKnown RBP15.45■□□□□ 0.06
LIN28A-201ENST00000254231 NSD3Q9BZ95 1437 aa15.45■□□□□ 0.06
LIN28A-201ENST00000254231 BCORL1Q5H9F3 1711 aa15.44■□□□□ 0.06
LIN28A-201ENST00000254231 CFAP74Q9C0B2 1584 aa15.44■□□□□ 0.06
LIN28A-201ENST00000254231 TRPM2O94759 1503 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms