RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 DUOX2Q9NRD8 1548 aa16.4■□□□□ 0.22
RAB3IP-201ENST00000247833 PREX2Q70Z35 1606 aa16.4■□□□□ 0.22
RAB3IP-201ENST00000247833 BCAR3O75815 825 aa16.39■□□□□ 0.21
RAB3IP-201ENST00000247833 DUSP27Q5VZP5 1158 aa16.38■□□□□ 0.21
RAB3IP-201ENST00000247833 PLEKHH1Q9ULM0 1364 aa16.38■□□□□ 0.21
RAB3IP-201ENST00000247833 MS4A1P11836 297 aa16.38■□□□□ 0.21
RAB3IP-201ENST00000247833 BCL2L13Q9BXK5 485 aa16.38■□□□□ 0.21
RAB3IP-201ENST00000247833 STK26Q9P289 416 aa16.37■□□□□ 0.21
RAB3IP-201ENST00000247833 ABCC2Q92887 1545 aa16.36■□□□□ 0.21
RAB3IP-201ENST00000247833 SLC12A5Q9H2X9 1139 aa16.36■□□□□ 0.21
RAB3IP-201ENST00000247833 DDRGK1Q96HY6 314 aa16.35■□□□□ 0.21
RAB3IP-201ENST00000247833 TRPM1Q7Z4N2 1603 aa16.35■□□□□ 0.21
RAB3IP-201ENST00000247833 CENPQQ7L2Z9 268 aaPredicted RBP16.35■□□□□ 0.21
RAB3IP-201ENST00000247833 CLUAP1Q96AJ1 413 aa16.34■□□□□ 0.21
RAB3IP-201ENST00000247833 COG6Q9Y2V7 657 aa16.34■□□□□ 0.21
RAB3IP-201ENST00000247833 MAGI2Q86UL8 1455 aa16.34■□□□□ 0.21
RAB3IP-201ENST00000247833 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
RAB3IP-201ENST00000247833 SCAF11Q99590 1463 aaKnown RBP16.33■□□□□ 0.2
RAB3IP-201ENST00000247833 CENPJQ9HC77 1338 aaPredicted RBP16.33■□□□□ 0.2
RAB3IP-201ENST00000247833 SLFN5Q08AF3 891 aa16.32■□□□□ 0.2
RAB3IP-201ENST00000247833 CHD1O14646 1710 aa16.32■□□□□ 0.2
RAB3IP-201ENST00000247833 U2SURPO15042 1029 aaKnown RBP16.32■□□□□ 0.2
RAB3IP-201ENST00000247833 PANK1Q8TE04 598 aa16.32■□□□□ 0.2
RAB3IP-201ENST00000247833 E9PSI1 815 aa16.31■□□□□ 0.2
RAB3IP-201ENST00000247833 U2AF1L5P0DN76 240 aaPredicted RBP16.31■□□□□ 0.2
RAB3IP-201ENST00000247833 U2AF1Q01081 240 aaKnown RBP eCLIP16.31■□□□□ 0.2
RAB3IP-201ENST00000247833 CFAP53Q96M91 514 aa16.31■□□□□ 0.2
RAB3IP-201ENST00000247833 MAST1Q9Y2H9 1570 aa16.31■□□□□ 0.2
RAB3IP-201ENST00000247833 RTN4Q9NQC3 1192 aaKnown RBP16.31■□□□□ 0.2
RAB3IP-201ENST00000247833 PPM1GO15355 546 aaPredicted RBP16.3■□□□□ 0.2
RAB3IP-201ENST00000247833 MYO5CQ9NQX4 1742 aa16.3■□□□□ 0.2
RAB3IP-201ENST00000247833 PRDM15P57071 1507 aaPredicted RBP16.3■□□□□ 0.2
RAB3IP-201ENST00000247833 SLC24A1O60721 1099 aa16.3■□□□□ 0.2
RAB3IP-201ENST00000247833 CARD14Q9BXL6 1004 aa16.3■□□□□ 0.2
RAB3IP-201ENST00000247833 BLMP54132 1417 aaPredicted RBP16.29■□□□□ 0.2
RAB3IP-201ENST00000247833 STAC3Q96MF2 364 aa16.29■□□□□ 0.2
RAB3IP-201ENST00000247833 EIF2AK4Q9P2K8 1649 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-201ENST00000247833 SRPK2P78362 688 aaKnown RBP16.29■□□□□ 0.2
RAB3IP-201ENST00000247833 STAG3Q9UJ98 1225 aa16.29■□□□□ 0.2
RAB3IP-201ENST00000247833 DMRT2Q9Y5R5 561 aa16.29■□□□□ 0.2
RAB3IP-201ENST00000247833 FANCAO15360 1455 aa16.28■□□□□ 0.2
RAB3IP-201ENST00000247833 FAM161AQ3B820 660 aa16.28■□□□□ 0.2
RAB3IP-201ENST00000247833 ADGRL1O94910 1474 aa16.27■□□□□ 0.2
RAB3IP-201ENST00000247833 WDR7Q9Y4E6 1490 aa16.27■□□□□ 0.2
RAB3IP-201ENST00000247833 MTHFSP49914 203 aa16.27■□□□□ 0.19
RAB3IP-201ENST00000247833 ATP10AO60312 1499 aa16.26■□□□□ 0.19
RAB3IP-201ENST00000247833 UNC13BO14795 1591 aa16.26■□□□□ 0.19
RAB3IP-201ENST00000247833 TCP11L2Q8N4U5 519 aa16.25■□□□□ 0.19
RAB3IP-201ENST00000247833 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
RAB3IP-201ENST00000247833 ASXL1Q8IXJ9 1541 aa16.25■□□□□ 0.19
RAB3IP-201ENST00000247833 IQGAP3Q86VI3 1631 aa16.25■□□□□ 0.19
RAB3IP-201ENST00000247833 ZMYM4Q5VZL5 1548 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 UGGT1Q9NYU2 1555 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 FTSJ3Q8IY81 847 aaKnown RBP16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 POGKQ9P215 609 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 RAPGEF3O95398 923 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 WWC1Q8IX03 1113 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 NOS1P29475 1434 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 NSD3Q9BZ95 1437 aa16.23■□□□□ 0.19
RAB3IP-201ENST00000247833 CFAP65Q6ZU64 1925 aaKnown RBP16.21■□□□□ 0.19
RAB3IP-201ENST00000247833 ABCC1P33527 1531 aa16.21■□□□□ 0.19
RAB3IP-201ENST00000247833 CGNL1Q0VF96 1302 aa16.21■□□□□ 0.19
RAB3IP-201ENST00000247833 PLXNC1O60486 1568 aa16.21■□□□□ 0.19
RAB3IP-201ENST00000247833 RUNDC1Q96C34 613 aa16.21■□□□□ 0.18
RAB3IP-201ENST00000247833 E9PCH4 1651 aa16.2■□□□□ 0.18
RAB3IP-201ENST00000247833 GGNBP2Q9H3C7 697 aa16.2■□□□□ 0.18
RAB3IP-201ENST00000247833 ARXQ96QS3 562 aa16.2■□□□□ 0.18
RAB3IP-201ENST00000247833 UPF2Q9HAU5 1272 aaKnown RBP16.2■□□□□ 0.18
RAB3IP-201ENST00000247833 MINK1Q8N4C8 1332 aaPredicted RBP16.19■□□□□ 0.18
RAB3IP-201ENST00000247833 ZCCHC11Q5TAX3 1644 aaKnown RBP16.19■□□□□ 0.18
RAB3IP-201ENST00000247833 MAPK8IP3Q9UPT6 1336 aa16.19■□□□□ 0.18
RAB3IP-201ENST00000247833 IGHDP01880 384 aa16.19■□□□□ 0.18
RAB3IP-201ENST00000247833 SLKQ9H2G2 1235 aaPredicted RBP16.19■□□□□ 0.18
RAB3IP-201ENST00000247833 NKTRP30414 1462 aaKnown RBP16.18■□□□□ 0.18
RAB3IP-201ENST00000247833 TNNQ9UQP3 1299 aa16.18■□□□□ 0.18
RAB3IP-201ENST00000247833 EVC2Q86UK5 1308 aa16.17■□□□□ 0.18
RAB3IP-201ENST00000247833 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
RAB3IP-201ENST00000247833 RTEL1-TNFRSF6BF6WH68 1400 aa16.17■□□□□ 0.18
RAB3IP-201ENST00000247833 KDM2BQ8NHM5 1336 aa16.17■□□□□ 0.18
RAB3IP-201ENST00000247833 ZNF521Q96K83 1311 aa16.17■□□□□ 0.18
RAB3IP-201ENST00000247833 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
RAB3IP-201ENST00000247833 NFKBIBQ15653 356 aa16.16■□□□□ 0.18
RAB3IP-201ENST00000247833 TSR2Q969E8 191 aaKnown RBP16.16■□□□□ 0.18
RAB3IP-201ENST00000247833 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
RAB3IP-201ENST00000247833 ATP7AQ04656 1500 aa16.16■□□□□ 0.18
RAB3IP-201ENST00000247833 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
RAB3IP-201ENST00000247833 ASXL2Q76L83 1435 aa16.14■□□□□ 0.18
RAB3IP-201ENST00000247833 MLECQ14165 292 aa16.14■□□□□ 0.17
RAB3IP-201ENST00000247833 C8orf34Q49A92 452 aa16.14■□□□□ 0.17
RAB3IP-201ENST00000247833 MYH16Q9H6N6 1097 aa16.14■□□□□ 0.17
RAB3IP-201ENST00000247833 TRPM2O94759 1503 aa16.14■□□□□ 0.17
RAB3IP-201ENST00000247833 CLTCL1P53675 1640 aa16.14■□□□□ 0.17
RAB3IP-201ENST00000247833 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.13■□□□□ 0.17
RAB3IP-201ENST00000247833 ITPRIPQ8IWB1 547 aa16.13■□□□□ 0.17
RAB3IP-201ENST00000247833 ZFYVE16Q7Z3T8 1539 aa16.13■□□□□ 0.17
RAB3IP-201ENST00000247833 PTPRTO14522 1441 aa16.13■□□□□ 0.17
RAB3IP-201ENST00000247833 PDE3AQ14432 1141 aa16.13■□□□□ 0.17
RAB3IP-201ENST00000247833 USP35Q9P2H5 1018 aa16.13■□□□□ 0.17
RAB3IP-201ENST00000247833 MADDQ8WXG6 1647 aa16.12■□□□□ 0.17
RAB3IP-201ENST00000247833 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms