RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 STAG3Q9UJ98 1225 aa26.18■■□□□ 1.78
TNFSF9-201ENST00000245817 PTPRMP28827 1452 aa26.17■■□□□ 1.78
TNFSF9-201ENST00000245817 C3P01024 1663 aa26.14■■□□□ 1.78
TNFSF9-201ENST00000245817 ADGRF5Q8IZF2 1346 aa26.13■■□□□ 1.77
TNFSF9-201ENST00000245817 VGFO15240 615 aaPredicted RBP26.13■■□□□ 1.77
TNFSF9-201ENST00000245817 SPATA31D1Q6ZQQ2 1576 aa26.13■■□□□ 1.77
TNFSF9-201ENST00000245817 WASHC2AQ641Q2 1341 aa26.12■■□□□ 1.77
TNFSF9-201ENST00000245817 ST20-MTHFSA0A0A6YYL1 179 aa26.12■■□□□ 1.77
TNFSF9-201ENST00000245817 MIER1Q8N108 512 aa26.12■■□□□ 1.77
TNFSF9-201ENST00000245817 LAMC1P11047 1609 aa26.1■■□□□ 1.77
TNFSF9-201ENST00000245817 IFT172Q9UG01 1749 aa26.08■■□□□ 1.77
TNFSF9-201ENST00000245817 CCDC7Q96M83 1385 aa26.08■■□□□ 1.77
TNFSF9-201ENST00000245817 NRXN1Q9ULB1 1477 aa26.07■■□□□ 1.76
TNFSF9-201ENST00000245817 C11orf95C9JLR9 678 aaPredicted RBP26.06■■□□□ 1.76
TNFSF9-201ENST00000245817 CFAP70Q5T0N1 1121 aa26.06■■□□□ 1.76
TNFSF9-201ENST00000245817 SETD1BQ9UPS6 1966 aaKnown RBP26.06■■□□□ 1.76
TNFSF9-201ENST00000245817 PPLO60437 1756 aa26.05■■□□□ 1.76
TNFSF9-201ENST00000245817 TNRQ92752 1358 aa26.05■■□□□ 1.76
TNFSF9-201ENST00000245817 TMEM131LA2VDJ0 1609 aa26.04■■□□□ 1.76
TNFSF9-201ENST00000245817 KIF7Q2M1P5 1343 aa26.04■■□□□ 1.76
TNFSF9-201ENST00000245817 KIAA1210Q9ULL0 1709 aa26.04■■□□□ 1.76
TNFSF9-201ENST00000245817 NUTM2DQ5VT03 806 aaPredicted RBP26.03■■□□□ 1.76
TNFSF9-201ENST00000245817 NEXMIFQ5QGS0 1516 aa26.02■■□□□ 1.76
TNFSF9-201ENST00000245817 PIK3C2GO75747 1445 aa26.01■■□□□ 1.75
TNFSF9-201ENST00000245817 SCAF11Q99590 1463 aaKnown RBP26.01■■□□□ 1.75
TNFSF9-201ENST00000245817 POLR3GLQ9BT43 218 aa26.01■■□□□ 1.75
TNFSF9-201ENST00000245817 C14orf93Q9H972 538 aaKnown RBP26.01■■□□□ 1.75
TNFSF9-201ENST00000245817 EIF3AQ14152 1382 aaKnown RBP26■■□□□ 1.75
TNFSF9-201ENST00000245817 ZFYVE9O95405 1425 aa26■■□□□ 1.75
TNFSF9-201ENST00000245817 ANP32CO43423 234 aa25.96■■□□□ 1.75
TNFSF9-201ENST00000245817 A2ML1A8K2U0 1454 aa25.96■■□□□ 1.75
TNFSF9-201ENST00000245817 HDGFP51858 240 aaKnown RBP25.96■■□□□ 1.75
TNFSF9-201ENST00000245817 POLR1AO95602 1720 aaPredicted RBP25.94■■□□□ 1.74
TNFSF9-201ENST00000245817 TMF1P82094 1093 aa25.94■■□□□ 1.74
TNFSF9-201ENST00000245817 AEBP2Q6ZN18 517 aaPredicted RBP25.94■■□□□ 1.74
TNFSF9-201ENST00000245817 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.93■■□□□ 1.74
TNFSF9-201ENST00000245817 MYO5BQ9ULV0 1848 aa25.93■■□□□ 1.74
TNFSF9-201ENST00000245817 SLC24A1O60721 1099 aa25.92■■□□□ 1.74
TNFSF9-201ENST00000245817 SETBP1Q9Y6X0 1596 aa25.92■■□□□ 1.74
TNFSF9-201ENST00000245817 TESK2Q96S53 571 aa25.91■■□□□ 1.74
TNFSF9-201ENST00000245817 RIMS2Q9UQ26 1411 aa25.91■■□□□ 1.74
TNFSF9-201ENST00000245817 IQGAP1P46940 1657 aa25.91■■□□□ 1.74
TNFSF9-201ENST00000245817 NLRP1Q9C000 1473 aa25.9■■□□□ 1.74
TNFSF9-201ENST00000245817 TMEM132EQ6IEE7 984 aa25.87■■□□□ 1.73
TNFSF9-201ENST00000245817 MYO3AQ8NEV4 1616 aa25.86■■□□□ 1.73
TNFSF9-201ENST00000245817 CDCA8Q53HL2 280 aa25.86■■□□□ 1.73
TNFSF9-201ENST00000245817 TRAK1Q9UPV9 953 aa25.85■■□□□ 1.73
TNFSF9-201ENST00000245817 SENP3Q9H4L4 574 aaPredicted RBP25.84■■□□□ 1.73
TNFSF9-201ENST00000245817 KDM5AP29375 1690 aaKnown RBP25.82■■□□□ 1.72
TNFSF9-201ENST00000245817 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
TNFSF9-201ENST00000245817 CEP170BQ9Y4F5 1589 aaPredicted RBP25.81■■□□□ 1.72
TNFSF9-201ENST00000245817 DISP3Q9P2K9 1392 aa25.81■■□□□ 1.72
TNFSF9-201ENST00000245817 THEMISQ8N1K5 641 aaPredicted RBP25.81■■□□□ 1.72
TNFSF9-201ENST00000245817 TMEM2Q9UHN6 1383 aa25.81■■□□□ 1.72
TNFSF9-201ENST00000245817 CENPJQ9HC77 1338 aaPredicted RBP25.8■■□□□ 1.72
TNFSF9-201ENST00000245817 BCANQ96GW7 911 aa25.78■■□□□ 1.72
TNFSF9-201ENST00000245817 ZNF142P52746 1687 aaPredicted RBP25.78■■□□□ 1.72
TNFSF9-201ENST00000245817 UBR1Q8IWV7 1749 aa25.77■■□□□ 1.72
TNFSF9-201ENST00000245817 EID1Q9Y6B2 187 aa25.77■■□□□ 1.72
TNFSF9-201ENST00000245817 ALKQ9UM73 1620 aa25.75■■□□□ 1.71
TNFSF9-201ENST00000245817 STK26Q9P289 416 aa25.75■■□□□ 1.71
TNFSF9-201ENST00000245817 LMTK3Q96Q04 1460 aa25.75■■□□□ 1.71
TNFSF9-201ENST00000245817 CCER2I3L3R5 266 aa25.74■■□□□ 1.71
TNFSF9-201ENST00000245817 SBNO2Q9Y2G9 1366 aa25.73■■□□□ 1.71
TNFSF9-201ENST00000245817 TXNDC2Q86VQ3 553 aa25.72■■□□□ 1.71
TNFSF9-201ENST00000245817 HSPA2P54652 639 aa25.71■■□□□ 1.71
TNFSF9-201ENST00000245817 YTHDC2Q9H6S0 1430 aaKnown RBP25.7■■□□□ 1.71
TNFSF9-201ENST00000245817 POGKQ9P215 609 aa25.68■■□□□ 1.7
TNFSF9-201ENST00000245817 ASXL1Q8IXJ9 1541 aa25.67■■□□□ 1.7
TNFSF9-201ENST00000245817 YTHDC1Q96MU7 727 aaKnown RBP25.67■■□□□ 1.7
TNFSF9-201ENST00000245817 PRKRIP1Q9H875 184 aaPredicted RBP25.67■■□□□ 1.7
TNFSF9-201ENST00000245817 LTKP29376 864 aa25.66■■□□□ 1.7
TNFSF9-201ENST00000245817 PLEKHG1Q9ULL1 1385 aa25.66■■□□□ 1.7
TNFSF9-201ENST00000245817 ANKLE2Q86XL3 938 aa25.65■■□□□ 1.7
TNFSF9-201ENST00000245817 SLIT1O75093 1534 aa25.64■■□□□ 1.7
TNFSF9-201ENST00000245817 PANK3Q9H999 370 aa25.64■■□□□ 1.69
TNFSF9-201ENST00000245817 LRPPRCP42704 1394 aaKnown RBP25.64■■□□□ 1.69
TNFSF9-201ENST00000245817 EVC2Q86UK5 1308 aa25.63■■□□□ 1.69
TNFSF9-201ENST00000245817 ARHGAP23Q9P227 1491 aa25.63■■□□□ 1.69
TNFSF9-201ENST00000245817 SAFB2Q14151 953 aaKnown RBP eCLIP25.62■■□□□ 1.69
TNFSF9-201ENST00000245817 PRAM1Q96QH2 718 aa25.62■■□□□ 1.69
TNFSF9-201ENST00000245817 QRICH2Q9H0J4 1663 aa25.62■■□□□ 1.69
TNFSF9-201ENST00000245817 ARHGEF28Q8N1W1 1705 aaKnown RBP25.62■■□□□ 1.69
TNFSF9-201ENST00000245817 CNGB1Q14028 1251 aaPredicted RBP25.6■■□□□ 1.69
TNFSF9-201ENST00000245817 ABCC11Q96J66 1382 aa25.59■■□□□ 1.69
TNFSF9-201ENST00000245817 NRXN3Q9Y4C0 1643 aa25.59■■□□□ 1.69
TNFSF9-201ENST00000245817 METP08581 1390 aa25.59■■□□□ 1.69
TNFSF9-201ENST00000245817 NCKAP5LQ9HCH0 1330 aa25.58■■□□□ 1.69
TNFSF9-201ENST00000245817 PUS7Q96PZ0 661 aaKnown RBP25.58■■□□□ 1.68
TNFSF9-201ENST00000245817 CENPBP07199 599 aaPredicted RBP25.57■■□□□ 1.68
TNFSF9-201ENST00000245817 DLC1Q96QB1 1528 aa25.56■■□□□ 1.68
TNFSF9-201ENST00000245817 PER1O15534 1290 aaPredicted RBP25.55■■□□□ 1.68
TNFSF9-201ENST00000245817 KNSTRNQ9Y448 316 aa25.55■■□□□ 1.68
TNFSF9-201ENST00000245817 SETD1AO15047 1707 aaKnown RBP25.55■■□□□ 1.68
TNFSF9-201ENST00000245817 ADAMTS13Q76LX8 1427 aa25.55■■□□□ 1.68
TNFSF9-201ENST00000245817 KTN1Q86UP2 1357 aaKnown RBP25.54■■□□□ 1.68
TNFSF9-201ENST00000245817 MINK1Q8N4C8 1332 aaPredicted RBP25.54■■□□□ 1.68
TNFSF9-201ENST00000245817 RALBP1Q15311 655 aa25.54■■□□□ 1.68
TNFSF9-201ENST00000245817 SIRT1Q96EB6 747 aa25.53■■□□□ 1.68
TNFSF9-201ENST00000245817 SLC26A8Q96RN1 970 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms