RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 MYO3AQ8NEV4 1616 aa23.9■■□□□ 1.42
CDKN1A-201ENST00000244741 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
CDKN1A-201ENST00000244741 NEURL4Q96JN8 1562 aa23.87■■□□□ 1.41
CDKN1A-201ENST00000244741 SETD1BQ9UPS6 1966 aaKnown RBP23.86■■□□□ 1.41
CDKN1A-201ENST00000244741 PRAG1Q86YV5 1406 aa23.85■■□□□ 1.41
CDKN1A-201ENST00000244741 NEXMIFQ5QGS0 1516 aa23.85■■□□□ 1.41
CDKN1A-201ENST00000244741 RPGRIP1LQ68CZ1 1315 aa23.85■■□□□ 1.41
CDKN1A-201ENST00000244741 PPLO60437 1756 aa23.84■■□□□ 1.41
CDKN1A-201ENST00000244741 RIMS2Q9UQ26 1411 aa23.84■■□□□ 1.41
CDKN1A-201ENST00000244741 CEP170BQ9Y4F5 1589 aaPredicted RBP23.84■■□□□ 1.41
CDKN1A-201ENST00000244741 IFT172Q9UG01 1749 aa23.83■■□□□ 1.41
CDKN1A-201ENST00000244741 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
CDKN1A-201ENST00000244741 VGFO15240 615 aaPredicted RBP23.82■■□□□ 1.4
CDKN1A-201ENST00000244741 UHRF1BP1Q6BDS2 1440 aa23.82■■□□□ 1.4
CDKN1A-201ENST00000244741 THEMISQ8N1K5 641 aaPredicted RBP23.82■■□□□ 1.4
CDKN1A-201ENST00000244741 TMEM2Q9UHN6 1383 aa23.81■■□□□ 1.4
CDKN1A-201ENST00000244741 LTKP29376 864 aa23.81■■□□□ 1.4
CDKN1A-201ENST00000244741 CFAP70Q5T0N1 1121 aa23.81■■□□□ 1.4
CDKN1A-201ENST00000244741 HIRIP3Q9BW71 556 aaPredicted RBP23.8■■□□□ 1.4
CDKN1A-201ENST00000244741 MYOM2P54296 1465 aa23.79■■□□□ 1.4
CDKN1A-201ENST00000244741 TXNDC2Q86VQ3 553 aa23.78■■□□□ 1.4
CDKN1A-201ENST00000244741 ZFYVE9O95405 1425 aa23.78■■□□□ 1.4
CDKN1A-201ENST00000244741 BCANQ96GW7 911 aa23.78■■□□□ 1.4
CDKN1A-201ENST00000244741 ROCK2O75116 1388 aaKnown RBP23.76■■□□□ 1.39
CDKN1A-201ENST00000244741 HSPA2P54652 639 aa23.75■■□□□ 1.39
CDKN1A-201ENST00000244741 PELP1Q8IZL8 1130 aaKnown RBP23.75■■□□□ 1.39
CDKN1A-201ENST00000244741 STAC3Q96MF2 364 aa23.75■■□□□ 1.39
CDKN1A-201ENST00000244741 KDM5AP29375 1690 aaKnown RBP23.75■■□□□ 1.39
CDKN1A-201ENST00000244741 CARD11Q9BXL7 1154 aa23.74■■□□□ 1.39
CDKN1A-201ENST00000244741 PIK3C2GO75747 1445 aa23.74■■□□□ 1.39
CDKN1A-201ENST00000244741 DDX10Q13206 875 aaKnown RBP23.74■■□□□ 1.39
CDKN1A-201ENST00000244741 TMEM132EQ6IEE7 984 aa23.74■■□□□ 1.39
CDKN1A-201ENST00000244741 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.74■■□□□ 1.39
CDKN1A-201ENST00000244741 EID1Q9Y6B2 187 aa23.74■■□□□ 1.39
CDKN1A-201ENST00000244741 NRXN1Q9ULB1 1477 aa23.73■■□□□ 1.39
CDKN1A-201ENST00000244741 ZNF142P52746 1687 aaPredicted RBP23.73■■□□□ 1.39
CDKN1A-201ENST00000244741 TRPM1Q7Z4N2 1603 aa23.73■■□□□ 1.39
CDKN1A-201ENST00000244741 HDGFP51858 240 aaKnown RBP23.72■■□□□ 1.39
CDKN1A-201ENST00000244741 RALGAPBQ86X10 1494 aa23.72■■□□□ 1.39
CDKN1A-201ENST00000244741 SLIT1O75093 1534 aa23.7■■□□□ 1.38
CDKN1A-201ENST00000244741 C14orf93Q9H972 538 aaKnown RBP23.69■■□□□ 1.38
CDKN1A-201ENST00000244741 ARHGAP23Q9P227 1491 aa23.69■■□□□ 1.38
CDKN1A-201ENST00000244741 SLC26A8Q96RN1 970 aa23.68■■□□□ 1.38
CDKN1A-201ENST00000244741 ANKLE2Q86XL3 938 aa23.67■■□□□ 1.38
CDKN1A-201ENST00000244741 NCKAP5LQ9HCH0 1330 aa23.67■■□□□ 1.38
CDKN1A-201ENST00000244741 SCAF11Q99590 1463 aaKnown RBP23.65■■□□□ 1.38
CDKN1A-201ENST00000244741 HSPA5P11021 654 aaKnown RBP23.65■■□□□ 1.38
CDKN1A-201ENST00000244741 STK26Q9P289 416 aa23.64■■□□□ 1.38
CDKN1A-201ENST00000244741 LMTK3Q96Q04 1460 aa23.63■■□□□ 1.37
CDKN1A-201ENST00000244741 EIF4G2P78344 907 aaKnown RBP eCLIP23.63■■□□□ 1.371e-7■■■□□ 17.9
CDKN1A-201ENST00000244741 USP47Q96K76 1375 aa23.62■■□□□ 1.37
CDKN1A-201ENST00000244741 ALKQ9UM73 1620 aa23.62■■□□□ 1.37
CDKN1A-201ENST00000244741 IQGAP1P46940 1657 aa23.62■■□□□ 1.37
CDKN1A-201ENST00000244741 PLEKHG1Q9ULL1 1385 aa23.62■■□□□ 1.37
CDKN1A-201ENST00000244741 NRXN3Q9Y4C0 1643 aa23.61■■□□□ 1.37
CDKN1A-201ENST00000244741 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
CDKN1A-201ENST00000244741 GPRASP1Q5JY77 1395 aa23.61■■□□□ 1.37
CDKN1A-201ENST00000244741 METP08581 1390 aa23.59■■□□□ 1.37
CDKN1A-201ENST00000244741 KIAA1210Q9ULL0 1709 aa23.59■■□□□ 1.37
CDKN1A-201ENST00000244741 ST20-MTHFSA0A0A6YYL1 179 aa23.58■■□□□ 1.37
CDKN1A-201ENST00000244741 ADAMTS13Q76LX8 1427 aa23.58■■□□□ 1.37
CDKN1A-201ENST00000244741 ASXL1Q8IXJ9 1541 aa23.57■■□□□ 1.36
CDKN1A-201ENST00000244741 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
CDKN1A-201ENST00000244741 SETBP1Q9Y6X0 1596 aa23.57■■□□□ 1.36
CDKN1A-201ENST00000244741 LAMC1P11047 1609 aa23.53■■□□□ 1.36
CDKN1A-201ENST00000244741 SAFB2Q14151 953 aaKnown RBP eCLIP23.53■■□□□ 1.36
CDKN1A-201ENST00000244741 SETD1AO15047 1707 aaKnown RBP23.53■■□□□ 1.36
CDKN1A-201ENST00000244741 NPHP4O75161 1426 aaPredicted RBP23.52■■□□□ 1.36
CDKN1A-201ENST00000244741 POLR1AO95602 1720 aaPredicted RBP23.51■■□□□ 1.35
CDKN1A-201ENST00000244741 YTHDC2Q9H6S0 1430 aaKnown RBP23.51■■□□□ 1.35
CDKN1A-201ENST00000244741 TBX22Q9Y458 520 aa23.5■■□□□ 1.35
CDKN1A-201ENST00000244741 MED14O60244 1454 aa23.49■■□□□ 1.35
CDKN1A-201ENST00000244741 C11orf95C9JLR9 678 aaPredicted RBP23.48■■□□□ 1.35
CDKN1A-201ENST00000244741 WAPLQ7Z5K2 1190 aa23.47■■□□□ 1.35
CDKN1A-201ENST00000244741 PTPRUQ92729 1446 aa23.46■■□□□ 1.35
CDKN1A-201ENST00000244741 PRAM1Q96QH2 718 aa23.45■■□□□ 1.35
CDKN1A-201ENST00000244741 POLR3GLQ9BT43 218 aa23.45■■□□□ 1.35
CDKN1A-201ENST00000244741 AMOTL2Q9Y2J4 779 aa23.45■■□□□ 1.35
CDKN1A-201ENST00000244741 ANP32CO43423 234 aa23.45■■□□□ 1.34
CDKN1A-201ENST00000244741 AEBP2Q6ZN18 517 aaPredicted RBP23.45■■□□□ 1.34
CDKN1A-201ENST00000244741 LRPPRCP42704 1394 aaKnown RBP23.44■■□□□ 1.34
CDKN1A-201ENST00000244741 STRCQ7RTU9 1775 aa23.44■■□□□ 1.34
CDKN1A-201ENST00000244741 EIF3AQ14152 1382 aaKnown RBP23.43■■□□□ 1.34
CDKN1A-201ENST00000244741 CCER2I3L3R5 266 aa23.43■■□□□ 1.34
CDKN1A-201ENST00000244741 TESK2Q96S53 571 aa23.43■■□□□ 1.34
CDKN1A-201ENST00000244741 POGKQ9P215 609 aa23.43■■□□□ 1.34
CDKN1A-201ENST00000244741 CENPJQ9HC77 1338 aaPredicted RBP23.43■■□□□ 1.34
CDKN1A-201ENST00000244741 PLEKHH1Q9ULM0 1364 aa23.42■■□□□ 1.34
CDKN1A-201ENST00000244741 KCNA6P17658 529 aa23.41■■□□□ 1.34
CDKN1A-201ENST00000244741 RBM33Q96EV2 1170 aaKnown RBP23.41■■□□□ 1.34
CDKN1A-201ENST00000244741 ARHGEF28Q8N1W1 1705 aaKnown RBP23.4■■□□□ 1.34
CDKN1A-201ENST00000244741 SUPT16HQ9Y5B9 1047 aaKnown RBP23.4■■□□□ 1.34
CDKN1A-201ENST00000244741 ABCC11Q96J66 1382 aa23.4■■□□□ 1.34
CDKN1A-201ENST00000244741 ROBO2Q9HCK4 1378 aa23.4■■□□□ 1.34
CDKN1A-201ENST00000244741 DIP2AQ14689 1571 aa23.39■■□□□ 1.33
CDKN1A-201ENST00000244741 MINK1Q8N4C8 1332 aaPredicted RBP23.39■■□□□ 1.33
CDKN1A-201ENST00000244741 WASHC2AQ641Q2 1341 aa23.38■■□□□ 1.33
CDKN1A-201ENST00000244741 DISP3Q9P2K9 1392 aa23.37■■□□□ 1.33
CDKN1A-201ENST00000244741 KIF7Q2M1P5 1343 aa23.35■■□□□ 1.33
CDKN1A-201ENST00000244741 QRICH2Q9H0J4 1663 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms