RNA–Protein interactions for RNA: ENST00000244227.7

SNRNP27-201, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP27, Length 1,802 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-201ENST00000244227 IDI1Q13907 227 aa19.08■□□□□ 0.64
SNRNP27-201ENST00000244227 RPGRIP1LQ68CZ1 1315 aa19.08■□□□□ 0.64
SNRNP27-201ENST00000244227 PREX1Q8TCU6 1659 aa19.08■□□□□ 0.64
SNRNP27-201ENST00000244227 CFAP70Q5T0N1 1121 aa19.07■□□□□ 0.64
SNRNP27-201ENST00000244227 POLR3GLQ9BT43 218 aa19.07■□□□□ 0.64
SNRNP27-201ENST00000244227 SLC52A1Q9NWF4 448 aa19.07■□□□□ 0.64
SNRNP27-201ENST00000244227 PPLO60437 1756 aa19.06■□□□□ 0.64
SNRNP27-201ENST00000244227 SCAF11Q99590 1463 aaKnown RBP19.06■□□□□ 0.64
SNRNP27-201ENST00000244227 PRKRIP1Q9H875 184 aaPredicted RBP19.06■□□□□ 0.64
SNRNP27-201ENST00000244227 FBXO31Q5XUX0 539 aaPredicted RBP19.05■□□□□ 0.64
SNRNP27-201ENST00000244227 ERVK-7P63135 1459 aa19.04■□□□□ 0.64
SNRNP27-201ENST00000244227 DISP3Q9P2K9 1392 aa19.03■□□□□ 0.64
SNRNP27-201ENST00000244227 CLTCQ00610 1675 aaKnown RBP19.03■□□□□ 0.64
SNRNP27-201ENST00000244227 MLECQ14165 292 aa19.03■□□□□ 0.64
SNRNP27-201ENST00000244227 PIK3C2GO75747 1445 aa19.03■□□□□ 0.64
SNRNP27-201ENST00000244227 NEXMIFQ5QGS0 1516 aa19.01■□□□□ 0.63
SNRNP27-201ENST00000244227 C14orf93Q9H972 538 aaKnown RBP19■□□□□ 0.63
SNRNP27-201ENST00000244227 TMEM131LA2VDJ0 1609 aa18.99■□□□□ 0.63
SNRNP27-201ENST00000244227 TMF1P82094 1093 aa18.99■□□□□ 0.63
SNRNP27-201ENST00000244227 SPATA31D1Q6ZQQ2 1576 aa18.98■□□□□ 0.63
SNRNP27-201ENST00000244227 SETBP1Q9Y6X0 1596 aa18.98■□□□□ 0.63
SNRNP27-201ENST00000244227 CCDC184Q52MB2 194 aa18.97■□□□□ 0.63
SNRNP27-201ENST00000244227 ZFYVE9O95405 1425 aa18.97■□□□□ 0.63
SNRNP27-201ENST00000244227 SCAF1Q9H7N4 1312 aaKnown RBP18.96■□□□□ 0.63
SNRNP27-201ENST00000244227 VGFO15240 615 aaPredicted RBP18.96■□□□□ 0.63
SNRNP27-201ENST00000244227 ADGRB1O14514 1584 aa18.96■□□□□ 0.63
SNRNP27-201ENST00000244227 EIF3AQ14152 1382 aaKnown RBP18.96■□□□□ 0.62
SNRNP27-201ENST00000244227 TRHP20396 242 aaPredicted RBP18.95■□□□□ 0.62
SNRNP27-201ENST00000244227 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
SNRNP27-201ENST00000244227 MYO5BQ9ULV0 1848 aa18.94■□□□□ 0.62
SNRNP27-201ENST00000244227 ZMYM3Q14202 1370 aa18.94■□□□□ 0.62
SNRNP27-201ENST00000244227 PER1O15534 1290 aaPredicted RBP18.92■□□□□ 0.62
SNRNP27-201ENST00000244227 TMEM132EQ6IEE7 984 aa18.9■□□□□ 0.62
SNRNP27-201ENST00000244227 DNAJC5Q9H3Z4 198 aa18.9■□□□□ 0.62
SNRNP27-201ENST00000244227 MYO3AQ8NEV4 1616 aa18.9■□□□□ 0.62
SNRNP27-201ENST00000244227 ESF1Q9H501 851 aaKnown RBP18.89■□□□□ 0.61
SNRNP27-201ENST00000244227 A2ML1A8K2U0 1454 aa18.88■□□□□ 0.61
SNRNP27-201ENST00000244227 SBNO2Q9Y2G9 1366 aa18.87■□□□□ 0.61
SNRNP27-201ENST00000244227 PANK3Q9H999 370 aa18.87■□□□□ 0.61
SNRNP27-201ENST00000244227 CDCA8Q53HL2 280 aa18.86■□□□□ 0.61
SNRNP27-201ENST00000244227 TRAK1Q9UPV9 953 aa18.86■□□□□ 0.61
SNRNP27-201ENST00000244227 MRS2Q9HD23 443 aa18.86■□□□□ 0.61
SNRNP27-201ENST00000244227 CENPJQ9HC77 1338 aaPredicted RBP18.85■□□□□ 0.61
SNRNP27-201ENST00000244227 SLC24A1O60721 1099 aa18.85■□□□□ 0.61
SNRNP27-201ENST00000244227 CNGB1Q14028 1251 aaPredicted RBP18.85■□□□□ 0.61
SNRNP27-201ENST00000244227 STAG3Q9UJ98 1225 aa18.84■□□□□ 0.61
SNRNP27-201ENST00000244227 GTF3C3Q9Y5Q9 886 aa18.84■□□□□ 0.61
SNRNP27-201ENST00000244227 KTN1Q86UP2 1357 aaKnown RBP18.84■□□□□ 0.61
SNRNP27-201ENST00000244227 ASXL1Q8IXJ9 1541 aa18.84■□□□□ 0.61
SNRNP27-201ENST00000244227 RALBP1Q15311 655 aa18.82■□□□□ 0.6
SNRNP27-201ENST00000244227 PARD3Q8TEW0 1356 aa18.81■□□□□ 0.6
SNRNP27-201ENST00000244227 TNRQ92752 1358 aa18.81■□□□□ 0.6
SNRNP27-201ENST00000244227 MYOM1P52179 1685 aa18.8■□□□□ 0.6
SNRNP27-201ENST00000244227 RIMS2Q9UQ26 1411 aa18.8■□□□□ 0.6
SNRNP27-201ENST00000244227 KDM5AP29375 1690 aaKnown RBP18.8■□□□□ 0.6
SNRNP27-201ENST00000244227 ARHGEF28Q8N1W1 1705 aaKnown RBP18.79■□□□□ 0.6
SNRNP27-201ENST00000244227 ALKQ9UM73 1620 aa18.79■□□□□ 0.6
SNRNP27-201ENST00000244227 MYBBP1AQ9BQG0 1328 aaKnown RBP18.78■□□□□ 0.6
SNRNP27-201ENST00000244227 QRICH2Q9H0J4 1663 aa18.78■□□□□ 0.6
SNRNP27-201ENST00000244227 SENP3Q9H4L4 574 aaPredicted RBP18.78■□□□□ 0.6
SNRNP27-201ENST00000244227 FAM9BQ8IZU0 186 aa18.77■□□□□ 0.6
SNRNP27-201ENST00000244227 CEBPAP49715 358 aaPredicted RBP18.75■□□□□ 0.59
SNRNP27-201ENST00000244227 YTHDC2Q9H6S0 1430 aaKnown RBP18.75■□□□□ 0.59
SNRNP27-201ENST00000244227 PTPRMP28827 1452 aa18.75■□□□□ 0.59
SNRNP27-201ENST00000244227 HNRNPUQ00839 825 aaKnown RBP eCLIP18.74■□□□□ 0.59
SNRNP27-201ENST00000244227 BRD4O60885 1362 aaPredicted RBP18.74■□□□□ 0.59
SNRNP27-201ENST00000244227 CC2D1BQ5T0F9 858 aaKnown RBP18.74■□□□□ 0.59
SNRNP27-201ENST00000244227 AMER1Q5JTC6 1135 aaPredicted RBP18.73■□□□□ 0.59
SNRNP27-201ENST00000244227 PNISRQ8TF01 805 aaKnown RBP18.73■□□□□ 0.59
SNRNP27-201ENST00000244227 STK26Q9P289 416 aa18.73■□□□□ 0.59
SNRNP27-201ENST00000244227 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNRNP27-201ENST00000244227 UBR1Q8IWV7 1749 aa18.72■□□□□ 0.59
SNRNP27-201ENST00000244227 KNSTRNQ9Y448 316 aa18.72■□□□□ 0.59
SNRNP27-201ENST00000244227 C3P01024 1663 aa18.71■□□□□ 0.59
SNRNP27-201ENST00000244227 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
SNRNP27-201ENST00000244227 TMC1Q8TDI8 760 aa18.71■□□□□ 0.59
SNRNP27-201ENST00000244227 TULP4Q9NRJ4 1543 aa18.71■□□□□ 0.59
SNRNP27-201ENST00000244227 NRXN3Q9Y4C0 1643 aa18.71■□□□□ 0.59
SNRNP27-201ENST00000244227 NLRP1Q9C000 1473 aa18.7■□□□□ 0.58
SNRNP27-201ENST00000244227 TMEM2Q9UHN6 1383 aa18.7■□□□□ 0.58
SNRNP27-201ENST00000244227 NLRP13Q86W25 1043 aa18.7■□□□□ 0.58
SNRNP27-201ENST00000244227 PUS7Q96PZ0 661 aaKnown RBP18.7■□□□□ 0.58
SNRNP27-201ENST00000244227 FER1L4A9Z1Z3 1794 aa18.7■□□□□ 0.58
SNRNP27-201ENST00000244227 NPC1L1Q9UHC9 1359 aa18.69■□□□□ 0.58
SNRNP27-201ENST00000244227 CARD14Q9BXL6 1004 aa18.69■□□□□ 0.58
SNRNP27-201ENST00000244227 EVC2Q86UK5 1308 aa18.68■□□□□ 0.58
SNRNP27-201ENST00000244227 LRPPRCP42704 1394 aaKnown RBP18.67■□□□□ 0.58
SNRNP27-201ENST00000244227 HDGFP51858 240 aaKnown RBP18.67■□□□□ 0.58
SNRNP27-201ENST00000244227 PRAM1Q96QH2 718 aa18.67■□□□□ 0.58
SNRNP27-201ENST00000244227 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
SNRNP27-201ENST00000244227 SLC12A5Q9H2X9 1139 aa18.65■□□□□ 0.58
SNRNP27-201ENST00000244227 DLC1Q96QB1 1528 aa18.65■□□□□ 0.58
SNRNP27-201ENST00000244227 ABCC11Q96J66 1382 aa18.64■□□□□ 0.58
SNRNP27-201ENST00000244227 METP08581 1390 aa18.64■□□□□ 0.57
SNRNP27-201ENST00000244227 LTKP29376 864 aa18.63■□□□□ 0.57
SNRNP27-201ENST00000244227 CABP2Q9NPB3 220 aa18.63■□□□□ 0.57
SNRNP27-201ENST00000244227 POGKQ9P215 609 aa18.63■□□□□ 0.57
SNRNP27-201ENST00000244227 ZBED9Q6R2W3 1325 aa18.62■□□□□ 0.57
SNRNP27-201ENST00000244227 PPP2R1AP30153 589 aa18.61■□□□□ 0.57
SNRNP27-201ENST00000244227 MINK1Q8N4C8 1332 aaPredicted RBP18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms