RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 XRCC6P12956 609 aaKnown RBP eCLIP11.73□□□□□ -0.53
SRSF6-201ENST00000244020 PLCB2Q00722 1185 aa11.73□□□□□ -0.53
SRSF6-201ENST00000244020 SPINK5Q9NQ38 1064 aaPredicted RBP11.73□□□□□ -0.53
SRSF6-201ENST00000244020 PRAG1Q86YV5 1406 aa11.73□□□□□ -0.53
SRSF6-201ENST00000244020 PDE3AQ14432 1141 aa11.73□□□□□ -0.53
SRSF6-201ENST00000244020 TBC1D2Q9BYX2 928 aa11.73□□□□□ -0.53
SRSF6-201ENST00000244020 MFAP1P55081 439 aaKnown RBP11.72□□□□□ -0.53
SRSF6-201ENST00000244020 BCL2L13Q9BXK5 485 aa11.72□□□□□ -0.53
SRSF6-201ENST00000244020 PANK2Q9BZ23 570 aa11.72□□□□□ -0.53
SRSF6-201ENST00000244020 RWDD1Q9H446 243 aaPredicted RBP11.72□□□□□ -0.53
SRSF6-201ENST00000244020 ADGRL2O95490 1459 aa11.72□□□□□ -0.53
SRSF6-201ENST00000244020 TRAK2O60296 914 aa11.72□□□□□ -0.53
SRSF6-201ENST00000244020 MCM4P33991 863 aa11.72□□□□□ -0.53
SRSF6-201ENST00000244020 NKTRP30414 1462 aaKnown RBP11.71□□□□□ -0.53
SRSF6-201ENST00000244020 USP19O94966 1318 aa11.71□□□□□ -0.54
SRSF6-201ENST00000244020 HSCBQ8IWL3 235 aa11.7□□□□□ -0.54
SRSF6-201ENST00000244020 COL17A1Q9UMD9 1497 aaPredicted RBP11.7□□□□□ -0.54
SRSF6-201ENST00000244020 RRP7AQ9Y3A4 280 aaKnown RBP11.7□□□□□ -0.54
SRSF6-201ENST00000244020 CHMP5Q9NZZ3 219 aa11.7□□□□□ -0.54
SRSF6-201ENST00000244020 MSNP26038 577 aaKnown RBP11.69□□□□□ -0.54
SRSF6-201ENST00000244020 MRE11P49959 708 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 PDZRN3Q9UPQ7 1066 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 PLB1Q6P1J6 1458 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 ADGBQ8N7X0 1667 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 FTSJ3Q8IY81 847 aaKnown RBP11.69□□□□□ -0.54
SRSF6-201ENST00000244020 RAPGEF6Q8TEU7 1601 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 ZNF521Q96K83 1311 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 TBC1D32Q96NH3 1257 aa11.69□□□□□ -0.54
SRSF6-201ENST00000244020 TNNT3P45378 269 aaPredicted RBP11.68□□□□□ -0.54
SRSF6-201ENST00000244020 ITSN2Q9NZM3 1697 aa11.68□□□□□ -0.54
SRSF6-201ENST00000244020 SLC24A1O60721 1099 aa11.68□□□□□ -0.54
SRSF6-201ENST00000244020 CLCN1P35523 988 aa11.68□□□□□ -0.54
SRSF6-201ENST00000244020 C22orf23Q9BZE7 217 aa11.68□□□□□ -0.54
SRSF6-201ENST00000244020 GOLGA6L22H0YM25 854 aa11.67□□□□□ -0.54
SRSF6-201ENST00000244020 ANTXR1Q9H6X2 564 aa11.67□□□□□ -0.54
SRSF6-201ENST00000244020 DDX11L8A8MPP1 907 aa11.66□□□□□ -0.54
SRSF6-201ENST00000244020 RRP9O43818 475 aaKnown RBP11.66□□□□□ -0.54
SRSF6-201ENST00000244020 ZMYND15Q9H091 742 aa11.66□□□□□ -0.54
SRSF6-201ENST00000244020 GRPEL1Q9HAV7 217 aa11.66□□□□□ -0.54
SRSF6-201ENST00000244020 DMRT2Q9Y5R5 561 aa11.66□□□□□ -0.54
SRSF6-201ENST00000244020 CARMIL2Q6F5E8 1435 aa11.66□□□□□ -0.54
SRSF6-201ENST00000244020 E9PCH4 1651 aa11.66□□□□□ -0.54
SRSF6-201ENST00000244020 JPH4Q96JJ6 628 aa11.65□□□□□ -0.54
SRSF6-201ENST00000244020 DISP1Q96F81 1524 aa11.65□□□□□ -0.54
SRSF6-201ENST00000244020 HSP90AB1P08238 724 aaKnown RBP11.65□□□□□ -0.54
SRSF6-201ENST00000244020 WWC1Q8IX03 1113 aa11.65□□□□□ -0.54
SRSF6-201ENST00000244020 ESPNB1AK53 854 aa11.65□□□□□ -0.54
SRSF6-201ENST00000244020 TRMT2AQ8IZ69 625 aaKnown RBP11.65□□□□□ -0.54
SRSF6-201ENST00000244020 PCDHB15Q9Y5E8 787 aa11.65□□□□□ -0.54
SRSF6-201ENST00000244020 KIAA0556O60303 1618 aa11.65□□□□□ -0.55
SRSF6-201ENST00000244020 RSPH4AQ5TD94 716 aa11.64□□□□□ -0.55
SRSF6-201ENST00000244020 NGEFQ8N5V2 710 aa11.64□□□□□ -0.55
SRSF6-201ENST00000244020 GPRASP1Q5JY77 1395 aa11.64□□□□□ -0.55
SRSF6-201ENST00000244020 ZNF608Q9ULD9 1512 aaPredicted RBP11.64□□□□□ -0.55
SRSF6-201ENST00000244020 FAM135AQ9P2D6 1515 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 ADAMTS12P58397 1594 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 CEP170Q5SW79 1584 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 NINLQ9Y2I6 1382 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 MORC1Q86VD1 984 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 GBP4Q96PP9 640 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 A2MP01023 1474 aa11.63□□□□□ -0.55
SRSF6-201ENST00000244020 KDM5DQ9BY66 1539 aa11.62□□□□□ -0.55
SRSF6-201ENST00000244020 RARSP54136 660 aaKnown RBP11.62□□□□□ -0.55
SRSF6-201ENST00000244020 AAMPQ13685 434 aa11.62□□□□□ -0.55
SRSF6-201ENST00000244020 FOXD4L1Q9NU39 408 aa11.62□□□□□ -0.55
SRSF6-201ENST00000244020 TNNQ9UQP3 1299 aa11.62□□□□□ -0.55
SRSF6-201ENST00000244020 MAGI2Q86UL8 1455 aa11.61□□□□□ -0.55
SRSF6-201ENST00000244020 FSD2A1L4K1 749 aa11.61□□□□□ -0.55
SRSF6-201ENST00000244020 PBRM1Q86U86 1689 aa11.61□□□□□ -0.55
SRSF6-201ENST00000244020 RLBP1P12271 317 aa11.6□□□□□ -0.55
SRSF6-201ENST00000244020 ITPRIPQ8IWB1 547 aa11.6□□□□□ -0.55
SRSF6-201ENST00000244020 TCP11L2Q8N4U5 519 aa11.6□□□□□ -0.55
SRSF6-201ENST00000244020 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
SRSF6-201ENST00000244020 TARBP1Q13395 1621 aaKnown RBP11.6□□□□□ -0.55
SRSF6-201ENST00000244020 SHANK2Q9UPX8 1470 aa11.6□□□□□ -0.55
SRSF6-201ENST00000244020 MAGI1Q96QZ7 1491 aaPredicted RBP11.59□□□□□ -0.55
SRSF6-201ENST00000244020 ZKSCAN2Q63HK3 967 aa11.59□□□□□ -0.55
SRSF6-201ENST00000244020 CFAP53Q96M91 514 aa11.59□□□□□ -0.55
SRSF6-201ENST00000244020 RUNDC1Q96C34 613 aa11.59□□□□□ -0.55
SRSF6-201ENST00000244020 PIK3C2GO75747 1445 aa11.59□□□□□ -0.55
SRSF6-201ENST00000244020 DZIP1LQ8IYY4 767 aaKnown RBP11.59□□□□□ -0.55
SRSF6-201ENST00000244020 SMC4Q9NTJ3 1288 aa11.58□□□□□ -0.56
SRSF6-201ENST00000244020 PTPRGP23470 1445 aa11.58□□□□□ -0.56
SRSF6-201ENST00000244020 ASXL1Q8IXJ9 1541 aa11.58□□□□□ -0.56
SRSF6-201ENST00000244020 FAM13BQ9NYF5 915 aa11.58□□□□□ -0.56
SRSF6-201ENST00000244020 ISY1Q9ULR0 285 aaKnown RBP11.57□□□□□ -0.56
SRSF6-201ENST00000244020 EIF4G3O43432 1585 aaKnown RBP11.57□□□□□ -0.56
SRSF6-201ENST00000244020 CCDC141Q6ZP82 1450 aa11.57□□□□□ -0.56
SRSF6-201ENST00000244020 WDR7Q9Y4E6 1490 aa11.57□□□□□ -0.56
SRSF6-201ENST00000244020 MVPQ14764 893 aaKnown RBP11.57□□□□□ -0.56
SRSF6-201ENST00000244020 SKOR2Q2VWA4 1001 aaPredicted RBP11.57□□□□□ -0.56
SRSF6-201ENST00000244020 CROCC2H7BZ55 1655 aa11.57□□□□□ -0.56
SRSF6-201ENST00000244020 PRDM15P57071 1507 aaPredicted RBP11.57□□□□□ -0.56
SRSF6-201ENST00000244020 U2AF1L5P0DN76 240 aaPredicted RBP11.56□□□□□ -0.56
SRSF6-201ENST00000244020 U2AF1Q01081 240 aaKnown RBP eCLIP11.56□□□□□ -0.562e-19■■□□□ 12.7
SRSF6-201ENST00000244020 GRIN2AQ12879 1464 aa11.55□□□□□ -0.56
SRSF6-201ENST00000244020 CHGAP10645 457 aaKnown RBP11.55□□□□□ -0.56
SRSF6-201ENST00000244020 MAPK8IP2Q13387 824 aaPredicted RBP11.55□□□□□ -0.56
SRSF6-201ENST00000244020 TNPO1Q92973 898 aaKnown RBP11.55□□□□□ -0.56
SRSF6-201ENST00000244020 NUP160Q12769 1436 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms