RNA–Protein interactions for RNA: ENST00000239893.9

EXOSC8-201, Transcript of exosome component 8, humanhuman

TSL 5

Gene EXOSC8, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8-201ENST00000239893 ZNF775Q96BV0 537 aaPredicted RBP9.69□□□□□ -0.86
EXOSC8-201ENST00000239893 CECR2Q9BXF3 1484 aa9.68□□□□□ -0.86
EXOSC8-201ENST00000239893 PADI6Q6TGC4 694 aa9.66□□□□□ -0.86
EXOSC8-201ENST00000239893 SLC19A1P41440 591 aa9.65□□□□□ -0.86
EXOSC8-201ENST00000239893 TRIM67Q6ZTA4 783 aa9.65□□□□□ -0.86
EXOSC8-201ENST00000239893 NPDC1Q9NQX5 325 aaPredicted RBP9.65□□□□□ -0.86
EXOSC8-201ENST00000239893 WDR70Q9NW82 654 aa9.65□□□□□ -0.86
EXOSC8-201ENST00000239893 PCDHB3Q9Y5E6 796 aa9.65□□□□□ -0.86
EXOSC8-201ENST00000239893 SMARCA4P51532 1647 aa9.64□□□□□ -0.87
EXOSC8-201ENST00000239893 SMARCA2P51531 1590 aa9.64□□□□□ -0.87
EXOSC8-201ENST00000239893 RNF223E7ERA6 249 aa9.63□□□□□ -0.87
EXOSC8-201ENST00000239893 DGAT1O75907 488 aa9.63□□□□□ -0.87
EXOSC8-201ENST00000239893 PKDCCQ504Y2 493 aa9.63□□□□□ -0.87
EXOSC8-201ENST00000239893 SPRYD3Q8NCJ5 442 aa9.63□□□□□ -0.87
EXOSC8-201ENST00000239893 EYA1Q99502 592 aa9.63□□□□□ -0.87
EXOSC8-201ENST00000239893 NCAPD3P42695 1498 aa9.63□□□□□ -0.87
EXOSC8-201ENST00000239893 PRR20EP86478 221 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 PRR20CP86479 221 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 PRR20DP86480 221 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 PRR20BP86481 221 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 PRR20AP86496 221 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 SPRYD7Q5W111 196 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 PEG3Q9GZU2 1588 aa9.61□□□□□ -0.87
EXOSC8-201ENST00000239893 MYT1Q01538 1121 aa9.6□□□□□ -0.87
EXOSC8-201ENST00000239893 BLOC1S3Q6QNY0 202 aa9.6□□□□□ -0.87
EXOSC8-201ENST00000239893 ZNF598Q86UK7 904 aaKnown RBP9.6□□□□□ -0.87
EXOSC8-201ENST00000239893 ANKLE1Q8NAG6 615 aa9.6□□□□□ -0.87
EXOSC8-201ENST00000239893 HMGXB3Q12766 1538 aa9.6□□□□□ -0.87
EXOSC8-201ENST00000239893 ATAD2BQ9ULI0 1458 aa9.59□□□□□ -0.87
EXOSC8-201ENST00000239893 EMID1Q96A84 441 aaPredicted RBP9.59□□□□□ -0.87
EXOSC8-201ENST00000239893 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.57□□□□□ -0.88
EXOSC8-201ENST00000239893 DNAJB2P25686 324 aa9.56□□□□□ -0.88
EXOSC8-201ENST00000239893 MROH2BQ7Z745 1585 aa9.55□□□□□ -0.88
EXOSC8-201ENST00000239893 TLL1O43897 1013 aa9.55□□□□□ -0.88
EXOSC8-201ENST00000239893 ACTN4O43707 911 aaKnown RBP9.54□□□□□ -0.88
EXOSC8-201ENST00000239893 KMT5BQ4FZB7 885 aa9.54□□□□□ -0.88
EXOSC8-201ENST00000239893 ZNF697Q5TEC3 545 aa9.54□□□□□ -0.88
EXOSC8-201ENST00000239893 BAZ1BQ9UIG0 1483 aaKnown RBP9.53□□□□□ -0.88
EXOSC8-201ENST00000239893 S1PR4O95977 384 aa9.53□□□□□ -0.88
EXOSC8-201ENST00000239893 LIAT1Q6ZQX7 453 aa9.53□□□□□ -0.88
EXOSC8-201ENST00000239893 FAM187AA6NFU0 413 aa9.52□□□□□ -0.89
EXOSC8-201ENST00000239893 GDF9O60383 454 aa9.52□□□□□ -0.89
EXOSC8-201ENST00000239893 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
EXOSC8-201ENST00000239893 TMEM134Q9H6X4 195 aa9.52□□□□□ -0.89
EXOSC8-201ENST00000239893 POTECB2RU33 542 aa9.51□□□□□ -0.89
EXOSC8-201ENST00000239893 PPEF1O14829 653 aaPredicted RBP9.51□□□□□ -0.89
EXOSC8-201ENST00000239893 ADH1BP00325 375 aa9.5□□□□□ -0.89
EXOSC8-201ENST00000239893 RSF1Q96T23 1441 aaPredicted RBP9.49□□□□□ -0.89
EXOSC8-201ENST00000239893 TNFRSF10AO00220 468 aa9.49□□□□□ -0.89
EXOSC8-201ENST00000239893 NR1I2O75469 434 aa9.48□□□□□ -0.89
EXOSC8-201ENST00000239893 CFHP08603 1231 aa9.48□□□□□ -0.89
EXOSC8-201ENST00000239893 PTGDRQ13258 359 aa9.48□□□□□ -0.89
EXOSC8-201ENST00000239893 ADGRG1Q9Y653 693 aa9.47□□□□□ -0.89
EXOSC8-201ENST00000239893 RCCD1A6NED2 376 aa9.46□□□□□ -0.9
EXOSC8-201ENST00000239893 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
EXOSC8-201ENST00000239893 TREML4Q6UXN2 200 aa9.46□□□□□ -0.9
EXOSC8-201ENST00000239893 SLC6A16Q9GZN6 736 aa9.46□□□□□ -0.9
EXOSC8-201ENST00000239893 CFAP44Q96MT7 982 aa9.45□□□□□ -0.9
EXOSC8-201ENST00000239893 RTN4Q9NQC3 1192 aaKnown RBP9.45□□□□□ -0.9
EXOSC8-201ENST00000239893 AAASQ9NRG9 546 aa9.45□□□□□ -0.9
EXOSC8-201ENST00000239893 PAXIP1Q6ZW49 1069 aaPredicted RBP9.44□□□□□ -0.9
EXOSC8-201ENST00000239893 ST8SIA5O15466 376 aa9.43□□□□□ -0.9
EXOSC8-201ENST00000239893 MLLT3P42568 568 aaPredicted RBP9.43□□□□□ -0.9
EXOSC8-201ENST00000239893 AMER1Q5JTC6 1135 aaPredicted RBP9.43□□□□□ -0.9
EXOSC8-201ENST00000239893 LCE2AQ5TA79 106 aaPredicted RBP9.43□□□□□ -0.9
EXOSC8-201ENST00000239893 TOP2AP11388 1531 aaKnown RBP9.42□□□□□ -0.9
EXOSC8-201ENST00000239893 SLC10A3P09131 477 aa9.42□□□□□ -0.9
EXOSC8-201ENST00000239893 PLA2G2CQ5R387 149 aa9.42□□□□□ -0.9
EXOSC8-201ENST00000239893 ARHGEF1Q92888 912 aaKnown RBP9.42□□□□□ -0.9
EXOSC8-201ENST00000239893 WIZO95785 1651 aa9.42□□□□□ -0.9
EXOSC8-201ENST00000239893 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.41□□□□□ -0.9
EXOSC8-201ENST00000239893 CRIPAKQ8N1N5 446 aa9.41□□□□□ -0.9
EXOSC8-201ENST00000239893 SCUBE3Q8IX30 993 aa9.4□□□□□ -0.9
EXOSC8-201ENST00000239893 PKD2L1Q9P0L9 805 aa9.4□□□□□ -0.9
EXOSC8-201ENST00000239893 FOXC1Q12948 553 aa9.38□□□□□ -0.91
EXOSC8-201ENST00000239893 RSPH4AQ5TD94 716 aa9.38□□□□□ -0.91
EXOSC8-201ENST00000239893 RPIAP49247 311 aa9.37□□□□□ -0.91
EXOSC8-201ENST00000239893 FAM161AQ3B820 660 aa9.37□□□□□ -0.91
EXOSC8-201ENST00000239893 SPSB2Q99619 263 aa9.37□□□□□ -0.91
EXOSC8-201ENST00000239893 LAMC3Q9Y6N6 1575 aa9.37□□□□□ -0.91
EXOSC8-201ENST00000239893 NUTM2FA1L443 756 aa9.36□□□□□ -0.91
EXOSC8-201ENST00000239893 AVPP01185 164 aa9.36□□□□□ -0.91
EXOSC8-201ENST00000239893 OATP04181 439 aa9.35□□□□□ -0.91
EXOSC8-201ENST00000239893 FCHSD2O94868 740 aa9.34□□□□□ -0.91
EXOSC8-201ENST00000239893 CD2BP2O95400 341 aaKnown RBP9.34□□□□□ -0.91
EXOSC8-201ENST00000239893 CTC1Q2NKJ3 1217 aa9.34□□□□□ -0.91
EXOSC8-201ENST00000239893 PXYLP1Q8TE99 480 aa9.34□□□□□ -0.91
EXOSC8-201ENST00000239893 TOR4AQ9NXH8 423 aa9.34□□□□□ -0.91
EXOSC8-201ENST00000239893 AXIN1O15169 862 aa9.33□□□□□ -0.92
EXOSC8-201ENST00000239893 WFS1O76024 890 aa9.33□□□□□ -0.92
EXOSC8-201ENST00000239893 PUS10Q3MIT2 529 aaKnown RBP9.33□□□□□ -0.92
EXOSC8-201ENST00000239893 CADPSQ9ULU8 1353 aa9.33□□□□□ -0.92
EXOSC8-201ENST00000239893 PDS5BQ9NTI5 1447 aa9.32□□□□□ -0.92
EXOSC8-201ENST00000239893 CYP4X1Q8N118 509 aa9.32□□□□□ -0.92
EXOSC8-201ENST00000239893 DACH1Q9UI36 760 aa9.32□□□□□ -0.92
EXOSC8-201ENST00000239893 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
EXOSC8-201ENST00000239893 SMCPP49901 116 aaPredicted RBP9.31□□□□□ -0.92
EXOSC8-201ENST00000239893 GMPR2Q9P2T1 348 aaKnown RBP9.31□□□□□ -0.92
EXOSC8-201ENST00000239893 ERCC6Q03468 1493 aa9.31□□□□□ -0.92
EXOSC8-201ENST00000239893 KCNV2Q8TDN2 545 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms