RNA–Protein interactions for RNA: ENST00000239878.8

UFM1-201, Transcript of ubiquitin fold modifier 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFM1, Length 3,138 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFM1-201ENST00000239878 KDM5AP29375 1690 aaKnown RBP5.38□□□□□ -1.55
UFM1-201ENST00000239878 CAMSAP1Q5T5Y3 1602 aa5.38□□□□□ -1.55
UFM1-201ENST00000239878 SPDYE4A6NLX3 237 aa5.38□□□□□ -1.55
UFM1-201ENST00000239878 ZEB1P37275 1124 aaPredicted RBP5.38□□□□□ -1.55
UFM1-201ENST00000239878 CFDP1Q9UEE9 299 aaPredicted RBP5.38□□□□□ -1.55
UFM1-201ENST00000239878 HFM1A2PYH4 1435 aa5.38□□□□□ -1.55
UFM1-201ENST00000239878 PIK3C2BO00750 1634 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 RAPGEF3O95398 923 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 SPATA31D1Q6ZQQ2 1576 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 TET3O43151 1660 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 ARHGAP31Q2M1Z3 1444 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 EFCAB6Q5THR3 1501 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 NECTIN2Q92692 538 aa5.37□□□□□ -1.55
UFM1-201ENST00000239878 NAIPQ13075 1403 aa5.36□□□□□ -1.55
UFM1-201ENST00000239878 AFAP1Q8N556 730 aa5.36□□□□□ -1.55
UFM1-201ENST00000239878 CLTCQ00610 1675 aaKnown RBP5.36□□□□□ -1.55
UFM1-201ENST00000239878 RIMS1Q86UR5 1692 aaKnown RBP5.36□□□□□ -1.55
UFM1-201ENST00000239878 CEP152O94986 1710 aa5.36□□□□□ -1.55
UFM1-201ENST00000239878 NEURL4Q96JN8 1562 aa5.35□□□□□ -1.55
UFM1-201ENST00000239878 POLA2Q14181 598 aa5.35□□□□□ -1.55
UFM1-201ENST00000239878 MYO3AQ8NEV4 1616 aa5.35□□□□□ -1.55
UFM1-201ENST00000239878 ZBTB12Q9Y330 459 aaPredicted RBP5.35□□□□□ -1.55
UFM1-201ENST00000239878 E9PCH4 1651 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 HNRNPMP52272 730 aaKnown RBP eCLIP5.34□□□□□ -1.55
UFM1-201ENST00000239878 NPATQ14207 1427 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 PZPP20742 1482 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 PTPRMP28827 1452 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 PREX1Q8TCU6 1659 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 KDM4FA0A1W2PPD8 638 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 SYNMO15061 1565 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 CNTLNQ9NXG0 1405 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 KIF15Q9NS87 1388 aa5.34□□□□□ -1.55
UFM1-201ENST00000239878 IGSF3O75054 1194 aa5.34□□□□□ -1.56
UFM1-201ENST00000239878 DHX30Q7L2E3 1194 aaKnown RBP eCLIP5.34□□□□□ -1.56
UFM1-201ENST00000239878 RPRD2Q5VT52 1461 aaKnown RBP5.34□□□□□ -1.56
UFM1-201ENST00000239878 SPAG9O60271 1321 aaKnown RBP5.34□□□□□ -1.56
UFM1-201ENST00000239878 CCDC136Q96JN2 1154 aa5.33□□□□□ -1.56
UFM1-201ENST00000239878 ATP1B4Q9UN42 357 aaPredicted RBP5.33□□□□□ -1.56
UFM1-201ENST00000239878 SALL2Q9Y467 1007 aaPredicted RBP5.33□□□□□ -1.56
UFM1-201ENST00000239878 ZMYND15Q9H091 742 aa5.33□□□□□ -1.56
UFM1-201ENST00000239878 ANKRD30AQ9BXX3 1397 aa5.32□□□□□ -1.56
UFM1-201ENST00000239878 NOS1P29475 1434 aa5.32□□□□□ -1.56
UFM1-201ENST00000239878 MKRN4PQ13434 485 aaPredicted RBP5.32□□□□□ -1.56
UFM1-201ENST00000239878 PTPRTO14522 1441 aa5.32□□□□□ -1.56
UFM1-201ENST00000239878 POTEMA6NI47 508 aa5.32□□□□□ -1.56
UFM1-201ENST00000239878 ANKRD50Q9ULJ7 1429 aa5.32□□□□□ -1.56
UFM1-201ENST00000239878 LMTK3Q96Q04 1460 aa5.31□□□□□ -1.56
UFM1-201ENST00000239878 ERVK-7P63135 1459 aa5.31□□□□□ -1.56
UFM1-201ENST00000239878 NKX1-1Q15270 411 aaPredicted RBP5.31□□□□□ -1.56
UFM1-201ENST00000239878 TRPM2O94759 1503 aa5.31□□□□□ -1.56
UFM1-201ENST00000239878 SPHKAPQ2M3C7 1700 aa5.31□□□□□ -1.56
UFM1-201ENST00000239878 UBR1Q8IWV7 1749 aa5.3□□□□□ -1.56
UFM1-201ENST00000239878 SPOCK2Q92563 424 aa5.3□□□□□ -1.56
UFM1-201ENST00000239878 CCDC9Q9Y3X0 531 aaKnown RBP5.3□□□□□ -1.56
UFM1-201ENST00000239878 CHGAP10645 457 aaKnown RBP5.3□□□□□ -1.56
UFM1-201ENST00000239878 IFT172Q9UG01 1749 aa5.3□□□□□ -1.56
UFM1-201ENST00000239878 PLA2R1Q13018 1463 aa5.3□□□□□ -1.56
UFM1-201ENST00000239878 UGGT1Q9NYU2 1555 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 HS6ST3Q8IZP7 471 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 TMEM131LA2VDJ0 1609 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 STRCQ7RTU9 1775 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 CEP170BQ9Y4F5 1589 aaPredicted RBP5.29□□□□□ -1.56
UFM1-201ENST00000239878 LMOD2Q6P5Q4 547 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 RSPH6AQ9H0K4 717 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 ADGRB3O60242 1522 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 SLIT1O75093 1534 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 ARHGAP23Q9P227 1491 aa5.29□□□□□ -1.56
UFM1-201ENST00000239878 POTEGQ6S5H5 508 aa5.28□□□□□ -1.56
UFM1-201ENST00000239878 NLRP1Q9C000 1473 aa5.28□□□□□ -1.56
UFM1-201ENST00000239878 CLTCL1P53675 1640 aa5.28□□□□□ -1.56
UFM1-201ENST00000239878 CLCN6P51797 869 aa5.28□□□□□ -1.56
UFM1-201ENST00000239878 PKNOX2Q96KN3 472 aa5.28□□□□□ -1.56
UFM1-201ENST00000239878 SETD1AO15047 1707 aaKnown RBP5.27□□□□□ -1.57
UFM1-201ENST00000239878 POLR1AO95602 1720 aaPredicted RBP5.27□□□□□ -1.57
UFM1-201ENST00000239878 ZNF777Q9ULD5 760 aaPredicted RBP5.27□□□□□ -1.57
UFM1-201ENST00000239878 A2ML1A8K2U0 1454 aa5.27□□□□□ -1.57
UFM1-201ENST00000239878 GTPBP6O43824 516 aaPredicted RBP5.27□□□□□ -1.57
UFM1-201ENST00000239878 POTEIP0CG38 1075 aa5.27□□□□□ -1.57
UFM1-201ENST00000239878 ZMYM3Q14202 1370 aa5.26□□□□□ -1.57
UFM1-201ENST00000239878 MED14O60244 1454 aa5.26□□□□□ -1.57
UFM1-201ENST00000239878 SETD5Q9C0A6 1442 aa5.26□□□□□ -1.57
UFM1-201ENST00000239878 NRXN3Q9Y4C0 1643 aa5.26□□□□□ -1.57
UFM1-201ENST00000239878 PRKAR2AP13861 404 aaKnown RBP5.26□□□□□ -1.57
UFM1-201ENST00000239878 ZFYVE9O95405 1425 aa5.25□□□□□ -1.57
UFM1-201ENST00000239878 PRAG1Q86YV5 1406 aa5.25□□□□□ -1.57
UFM1-201ENST00000239878 NRXN1Q9ULB1 1477 aa5.25□□□□□ -1.57
UFM1-201ENST00000239878 TSPY4P0CV99 314 aa5.25□□□□□ -1.57
UFM1-201ENST00000239878 TSPY10P0CW01 314 aa5.25□□□□□ -1.57
UFM1-201ENST00000239878 NEUROD2Q15784 382 aa5.25□□□□□ -1.57
UFM1-201ENST00000239878 YTHDC1Q96MU7 727 aaKnown RBP5.25□□□□□ -1.57
UFM1-201ENST00000239878 PPLO60437 1756 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 NEXMIFQ5QGS0 1516 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 RGS22Q8NE09 1264 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 MYO5BQ9ULV0 1848 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 NWD1Q149M9 1564 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 RAB3GAP2Q9H2M9 1393 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 ZC3H15Q8WU90 426 aaKnown RBP5.24□□□□□ -1.57
UFM1-201ENST00000239878 SETBP1Q9Y6X0 1596 aa5.24□□□□□ -1.57
UFM1-201ENST00000239878 SPATA31E1Q6ZUB1 1445 aa5.23□□□□□ -1.57
UFM1-201ENST00000239878 DIEXFQ68CQ4 756 aaKnown RBP5.23□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms