RNA–Protein interactions for RNA: ENST00000238146.8

DDX55-201, Transcript of DEAD-box helicase 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX55, Length 2,654 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-201ENST00000238146 RNF17Q9BXT8 1623 aaKnown RBP20.21■□□□□ 0.83
DDX55-201ENST00000238146 FRAT1Q92837 279 aaPredicted RBP20.2■□□□□ 0.82
DDX55-201ENST00000238146 RGS3P49796 1198 aa20.19■□□□□ 0.82
DDX55-201ENST00000238146 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
DDX55-201ENST00000238146 PRKCSHP14314 528 aaPredicted RBP20.18■□□□□ 0.82
DDX55-201ENST00000238146 CLASP1Q7Z460 1538 aa20.18■□□□□ 0.82
DDX55-201ENST00000238146 ARHGAP5Q13017 1502 aa20.16■□□□□ 0.82
DDX55-201ENST00000238146 SPINK5Q9NQ38 1064 aaPredicted RBP20.16■□□□□ 0.82
DDX55-201ENST00000238146 PLXNC1O60486 1568 aa20.16■□□□□ 0.82
DDX55-201ENST00000238146 PIK3C2GO75747 1445 aa20.15■□□□□ 0.82
DDX55-201ENST00000238146 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.82
DDX55-201ENST00000238146 ERCC6Q03468 1493 aa20.13■□□□□ 0.81
DDX55-201ENST00000238146 FRAT2O75474 233 aaPredicted RBP20.13■□□□□ 0.81
DDX55-201ENST00000238146 ASXL1Q8IXJ9 1541 aa20.13■□□□□ 0.81
DDX55-201ENST00000238146 EIF3AQ14152 1382 aaKnown RBP20.13■□□□□ 0.81
DDX55-201ENST00000238146 TTC37Q6PGP7 1564 aa20.13■□□□□ 0.81
DDX55-201ENST00000238146 CDCA8Q53HL2 280 aa20.13■□□□□ 0.81
DDX55-201ENST00000238146 DUOX2Q9NRD8 1548 aa20.12■□□□□ 0.81
DDX55-201ENST00000238146 SYNMO15061 1565 aa20.12■□□□□ 0.81
DDX55-201ENST00000238146 BCAR3O75815 825 aa20.12■□□□□ 0.81
DDX55-201ENST00000238146 IQGAP1P46940 1657 aa20.12■□□□□ 0.81
DDX55-201ENST00000238146 NKTRP30414 1462 aaKnown RBP20.11■□□□□ 0.81
DDX55-201ENST00000238146 APAF1O14727 1248 aa20.11■□□□□ 0.81
DDX55-201ENST00000238146 MADDQ8WXG6 1647 aa20.11■□□□□ 0.81
DDX55-201ENST00000238146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.1■□□□□ 0.81
DDX55-201ENST00000238146 NPC1L1Q9UHC9 1359 aa20.1■□□□□ 0.81
DDX55-201ENST00000238146 SCAF11Q99590 1463 aaKnown RBP20.09■□□□□ 0.81
DDX55-201ENST00000238146 IGHDP01880 384 aa20.08■□□□□ 0.81
DDX55-201ENST00000238146 ABCC2Q92887 1545 aa20.08■□□□□ 0.8
DDX55-201ENST00000238146 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.07■□□□□ 0.8
DDX55-201ENST00000238146 USP19O94966 1318 aa20.07■□□□□ 0.8
DDX55-201ENST00000238146 E9PSI1 815 aa20.07■□□□□ 0.8
DDX55-201ENST00000238146 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
DDX55-201ENST00000238146 SCAPERQ9BY12 1400 aa20.05■□□□□ 0.8
DDX55-201ENST00000238146 MYOM1P52179 1685 aa20.04■□□□□ 0.8
DDX55-201ENST00000238146 PDE3AQ14432 1141 aa20.02■□□□□ 0.8
DDX55-201ENST00000238146 CGNL1Q0VF96 1302 aa20.02■□□□□ 0.8
DDX55-201ENST00000238146 STAC3Q96MF2 364 aa20.01■□□□□ 0.79
DDX55-201ENST00000238146 SEC24BO95487 1268 aa20■□□□□ 0.79
DDX55-201ENST00000238146 SPHKAPQ2M3C7 1700 aa20■□□□□ 0.79
DDX55-201ENST00000238146 NGEFQ8N5V2 710 aa19.99■□□□□ 0.79
DDX55-201ENST00000238146 CLUAP1Q96AJ1 413 aa19.99■□□□□ 0.79
DDX55-201ENST00000238146 TRPM2O94759 1503 aa19.98■□□□□ 0.79
DDX55-201ENST00000238146 MAPK8IP3Q9UPT6 1336 aa19.98■□□□□ 0.79
DDX55-201ENST00000238146 VIRMAQ69YN4 1812 aaKnown RBP19.98■□□□□ 0.79
DDX55-201ENST00000238146 PANK1Q8TE04 598 aa19.98■□□□□ 0.79
DDX55-201ENST00000238146 COG6Q9Y2V7 657 aa19.98■□□□□ 0.79
DDX55-201ENST00000238146 CENPJQ9HC77 1338 aaPredicted RBP19.97■□□□□ 0.79
DDX55-201ENST00000238146 CARD14Q9BXL6 1004 aa19.97■□□□□ 0.79
DDX55-201ENST00000238146 PTPRTO14522 1441 aa19.96■□□□□ 0.79
DDX55-201ENST00000238146 NINLQ9Y2I6 1382 aa19.96■□□□□ 0.79
DDX55-201ENST00000238146 WWC1Q8IX03 1113 aa19.95■□□□□ 0.78
DDX55-201ENST00000238146 KDM5AP29375 1690 aaKnown RBP19.95■□□□□ 0.78
DDX55-201ENST00000238146 PLCH2O75038 1416 aa19.95■□□□□ 0.78
DDX55-201ENST00000238146 TRAPPC8Q9Y2L5 1435 aa19.95■□□□□ 0.78
DDX55-201ENST00000238146 CEP152O94986 1710 aa19.94■□□□□ 0.78
DDX55-201ENST00000238146 CLTCL1P53675 1640 aa19.94■□□□□ 0.78
DDX55-201ENST00000238146 CANXP27824 592 aaKnown RBP19.94■□□□□ 0.78
DDX55-201ENST00000238146 EFCAB2Q5VUJ9 269 aa19.94■□□□□ 0.78
DDX55-201ENST00000238146 BECN1Q14457 450 aa19.93■□□□□ 0.78
DDX55-201ENST00000238146 NLRP1Q9C000 1473 aa19.93■□□□□ 0.78
DDX55-201ENST00000238146 ERVK-7P63135 1459 aa19.92■□□□□ 0.78
DDX55-201ENST00000238146 POGKQ9P215 609 aa19.92■□□□□ 0.78
DDX55-201ENST00000238146 FAM43AQ8N2R8 423 aa19.9■□□□□ 0.78
DDX55-201ENST00000238146 SLKQ9H2G2 1235 aaPredicted RBP19.9■□□□□ 0.78
DDX55-201ENST00000238146 POLR3AO14802 1390 aaPredicted RBP19.9■□□□□ 0.78
DDX55-201ENST00000238146 ABCC1P33527 1531 aa19.9■□□□□ 0.78
DDX55-201ENST00000238146 CFAP70Q5T0N1 1121 aa19.9■□□□□ 0.78
DDX55-201ENST00000238146 SLC24A1O60721 1099 aa19.89■□□□□ 0.78
DDX55-201ENST00000238146 KIAA1210Q9ULL0 1709 aa19.88■□□□□ 0.77
DDX55-201ENST00000238146 SPAG9O60271 1321 aaKnown RBP19.88■□□□□ 0.77
DDX55-201ENST00000238146 RARSP54136 660 aaKnown RBP19.88■□□□□ 0.77
DDX55-201ENST00000238146 ANTXR1Q9H6X2 564 aa19.88■□□□□ 0.77
DDX55-201ENST00000238146 PCDHB15Q9Y5E8 787 aa19.88■□□□□ 0.77
DDX55-201ENST00000238146 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
DDX55-201ENST00000238146 AFAP1Q8N556 730 aa19.86■□□□□ 0.77
DDX55-201ENST00000238146 RLBP1P12271 317 aa19.86■□□□□ 0.77
DDX55-201ENST00000238146 NEUROD2Q15784 382 aa19.86■□□□□ 0.77
DDX55-201ENST00000238146 AAMPQ13685 434 aa19.85■□□□□ 0.77
DDX55-201ENST00000238146 TBC1D32Q96NH3 1257 aa19.85■□□□□ 0.77
DDX55-201ENST00000238146 TNNQ9UQP3 1299 aa19.85■□□□□ 0.77
DDX55-201ENST00000238146 RRP7AQ9Y3A4 280 aaKnown RBP19.85■□□□□ 0.77
DDX55-201ENST00000238146 ADGRF5Q8IZF2 1346 aa19.84■□□□□ 0.77
DDX55-201ENST00000238146 RTEL1-TNFRSF6BF6WH68 1400 aa19.84■□□□□ 0.77
DDX55-201ENST00000238146 PDZRN3Q9UPQ7 1066 aa19.83■□□□□ 0.77
DDX55-201ENST00000238146 ZMYM3Q14202 1370 aa19.83■□□□□ 0.77
DDX55-201ENST00000238146 RUNDC1Q96C34 613 aa19.83■□□□□ 0.76
DDX55-201ENST00000238146 PHF23Q9BUL5 403 aaPredicted RBP19.83■□□□□ 0.76
DDX55-201ENST00000238146 UPF2Q9HAU5 1272 aaKnown RBP19.83■□□□□ 0.76
DDX55-201ENST00000238146 TET3O43151 1660 aa19.83■□□□□ 0.76
DDX55-201ENST00000238146 SHROOM2Q13796 1616 aa19.82■□□□□ 0.76
DDX55-201ENST00000238146 TCP11L2Q8N4U5 519 aa19.82■□□□□ 0.76
DDX55-201ENST00000238146 TBC1D2Q9BYX2 928 aa19.82■□□□□ 0.76
DDX55-201ENST00000238146 DEPDC5O75140 1603 aa19.82■□□□□ 0.76
DDX55-201ENST00000238146 ZFYVE16Q7Z3T8 1539 aa19.81■□□□□ 0.76
DDX55-201ENST00000238146 ERCC6L2Q5T890 1561 aa19.81■□□□□ 0.76
DDX55-201ENST00000238146 MAP3K4Q9Y6R4 1608 aa19.81■□□□□ 0.76
DDX55-201ENST00000238146 ABCA6Q8N139 1617 aa19.81■□□□□ 0.76
DDX55-201ENST00000238146 MYOM2P54296 1465 aa19.81■□□□□ 0.76
DDX55-201ENST00000238146 EIF5BO60841 1220 aaKnown RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms