RNA–Protein interactions for RNA: ENST00000237380.11

MED28-201, Transcript of mediator complex subunit 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MED28, Length 10,868 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-201ENST00000237380 ZNF710Q8N1W2 664 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 NAP1L5Q96NT1 182 aaPredicted RBP9.04□□□□□ -0.96
MED28-201ENST00000237380 PTPRGP23470 1445 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 DMRT2Q9Y5R5 561 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 SLC4A10Q6U841 1118 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 JPH4Q96JJ6 628 aa9.04□□□□□ -0.96
MED28-201ENST00000237380 AAMPQ13685 434 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 SYTL4Q96C24 671 aaPredicted RBP9.03□□□□□ -0.96
MED28-201ENST00000237380 ERC2O15083 957 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 RRP12Q5JTH9 1297 aaKnown RBP9.03□□□□□ -0.96
MED28-201ENST00000237380 ANKRD18AQ8IVF6 992 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 CADPSQ9ULU8 1353 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 RAD21O60216 631 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 DIAPH3Q9NSV4 1193 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 CPLX1O14810 134 aa9.03□□□□□ -0.96
MED28-201ENST00000237380 DHX8Q14562 1220 aaKnown RBP9.03□□□□□ -0.96
MED28-201ENST00000237380 CREBRFQ8IUR6 639 aa9.02□□□□□ -0.97
MED28-201ENST00000237380 PAF1Q8N7H5 531 aa9.02□□□□□ -0.97
MED28-201ENST00000237380 REC8O95072 547 aa9.02□□□□□ -0.97
MED28-201ENST00000237380 CHMP5Q9NZZ3 219 aa9.02□□□□□ -0.97
MED28-201ENST00000237380 TBC1D2BQ9UPU7 963 aa9.02□□□□□ -0.97
MED28-201ENST00000237380 KIF15Q9NS87 1388 aa9.02□□□□□ -0.97
MED28-201ENST00000237380 G3BP1Q13283 466 aaKnown RBP eCLIP9.01□□□□□ -0.97
MED28-201ENST00000237380 TMEM132AQ24JP5 1023 aa9.01□□□□□ -0.97
MED28-201ENST00000237380 PLEKHH2Q8IVE3 1493 aa9.01□□□□□ -0.97
MED28-201ENST00000237380 NINLQ9Y2I6 1382 aa9.01□□□□□ -0.97
MED28-201ENST00000237380 APPP05067 770 aa9.01□□□□□ -0.97
MED28-201ENST00000237380 HIP1O00291 1037 aa9.01□□□□□ -0.97
MED28-201ENST00000237380 RRBP1Q9P2E9 1410 aaKnown RBP9.01□□□□□ -0.97
MED28-201ENST00000237380 CENPJQ9HC77 1338 aaPredicted RBP9.01□□□□□ -0.97
MED28-201ENST00000237380 THEMISQ8N1K5 641 aaPredicted RBP9.01□□□□□ -0.97
MED28-201ENST00000237380 PCMTD1Q96MG8 357 aaPredicted RBP9.01□□□□□ -0.97
MED28-201ENST00000237380 IFIT2P09913 472 aaKnown RBP9□□□□□ -0.97
MED28-201ENST00000237380 CYB5RLQ6IPT4 315 aa9□□□□□ -0.97
MED28-201ENST00000237380 PIP4K2AP48426 406 aaPredicted RBP9□□□□□ -0.97
MED28-201ENST00000237380 TXLNAP40222 546 aa9□□□□□ -0.97
MED28-201ENST00000237380 SKOR2Q2VWA4 1001 aaPredicted RBP9□□□□□ -0.97
MED28-201ENST00000237380 SYCP1Q15431 976 aa9□□□□□ -0.97
MED28-201ENST00000237380 SMARCA4P51532 1647 aa9□□□□□ -0.97
MED28-201ENST00000237380 LTV1Q96GA3 475 aaPredicted RBP9□□□□□ -0.97
MED28-201ENST00000237380 BECN2A8MW95 431 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 FAM69CQ0P6D2 419 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 RALYLQ86SE5 291 aaKnown RBP8.99□□□□□ -0.97
MED28-201ENST00000237380 MPHOSPH9Q99550 1183 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 ACBD3Q9H3P7 528 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 ZNF287Q9HBT7 754 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 LUC7LQ9NQ29 371 aaKnown RBP8.99□□□□□ -0.97
MED28-201ENST00000237380 NFXL1Q6ZNB6 911 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 DDX11L8A8MPP1 907 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 IKQ13123 557 aaPredicted RBP8.99□□□□□ -0.97
MED28-201ENST00000237380 NLRP13Q86W25 1043 aa8.99□□□□□ -0.97
MED28-201ENST00000237380 NOP58Q9Y2X3 529 aaKnown RBP8.99□□□□□ -0.97
MED28-201ENST00000237380 MROH2BQ7Z745 1585 aa8.98□□□□□ -0.97
MED28-201ENST00000237380 AK7Q96M32 723 aa8.98□□□□□ -0.97
MED28-201ENST00000237380 API5Q9BZZ5 524 aaKnown RBP8.98□□□□□ -0.97
MED28-201ENST00000237380 NAT10Q9H0A0 1025 aaKnown RBP8.98□□□□□ -0.97
MED28-201ENST00000237380 RCAN3Q9UKA8 241 aa8.98□□□□□ -0.97
MED28-201ENST00000237380 CCDC88BA6NC98 1476 aa8.98□□□□□ -0.97
MED28-201ENST00000237380 FYCO1Q9BQS8 1478 aa8.98□□□□□ -0.97
MED28-201ENST00000237380 APBB1O00213 710 aa8.98□□□□□ -0.97
MED28-201ENST00000237380 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.98□□□□□ -0.97
MED28-201ENST00000237380 MPHOSPH6Q99547 160 aaKnown RBP8.98□□□□□ -0.97
MED28-201ENST00000237380 TNNT3P45378 269 aaPredicted RBP8.97□□□□□ -0.97
MED28-201ENST00000237380 DCTN1Q14203 1278 aa8.97□□□□□ -0.97
MED28-201ENST00000237380 HMGB1P09429 215 aaKnown RBP8.97□□□□□ -0.97
MED28-201ENST00000237380 ZSCAN25Q6NSZ9 544 aa8.97□□□□□ -0.97
MED28-201ENST00000237380 KIF7Q2M1P5 1343 aa8.97□□□□□ -0.97
MED28-201ENST00000237380 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.97□□□□□ -0.97
MED28-201ENST00000237380 CCDC7Q96M83 1385 aa8.97□□□□□ -0.97
MED28-201ENST00000237380 PSMA5P28066 241 aa8.97□□□□□ -0.97
MED28-201ENST00000237380 ERC1Q8IUD2 1116 aa8.96□□□□□ -0.97
MED28-201ENST00000237380 TMEM87AQ8NBN3 555 aa8.96□□□□□ -0.97
MED28-201ENST00000237380 FANCD2Q9BXW9 1451 aa8.96□□□□□ -0.97
MED28-201ENST00000237380 E9PSI1 815 aa8.96□□□□□ -0.97
MED28-201ENST00000237380 PNISRQ8TF01 805 aaKnown RBP8.96□□□□□ -0.97
MED28-201ENST00000237380 ZNF652Q9Y2D9 606 aa8.96□□□□□ -0.97
MED28-201ENST00000237380 RUFY1Q96T51 708 aa8.96□□□□□ -0.98
MED28-201ENST00000237380 PLEKHO1Q53GL0 409 aaPredicted RBP8.96□□□□□ -0.98
MED28-201ENST00000237380 TMOD2Q9NZR1 351 aa8.96□□□□□ -0.98
MED28-201ENST00000237380 KIF21BO75037 1637 aa8.96□□□□□ -0.98
MED28-201ENST00000237380 GAS2L2Q8NHY3 880 aa8.95□□□□□ -0.98
MED28-201ENST00000237380 CDK5RAP3Q96JB5 506 aa8.95□□□□□ -0.98
MED28-201ENST00000237380 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.95□□□□□ -0.98
MED28-201ENST00000237380 RIC3Q7Z5B4 369 aa8.95□□□□□ -0.98
MED28-201ENST00000237380 HSP90AB2PQ58FF8 381 aa8.95□□□□□ -0.98
MED28-201ENST00000237380 HNRNPMP52272 730 aaKnown RBP eCLIP8.95□□□□□ -0.98
MED28-201ENST00000237380 OFD1O75665 1012 aa8.95□□□□□ -0.98
MED28-201ENST00000237380 PDIA4P13667 645 aaKnown RBP8.95□□□□□ -0.98
MED28-201ENST00000237380 TNIP1Q15025 636 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 ERICH3Q5RHP9 1530 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 FEZ1Q99689 392 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 LRPPRCP42704 1394 aaKnown RBP8.94□□□□□ -0.98
MED28-201ENST00000237380 DDX19BQ9UMR2 479 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 MPHOSPH10O00566 681 aaKnown RBP8.94□□□□□ -0.98
MED28-201ENST00000237380 OLFM4Q6UX06 510 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 CAGE1Q8TC20 777 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 SYNJ2O15056 1496 aa8.94□□□□□ -0.98
MED28-201ENST00000237380 ERLIN2O94905 339 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 CCDC27Q2M243 656 aa8.93□□□□□ -0.98
MED28-201ENST00000237380 DIAPH1O60610 1272 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms