RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 NEXMIFQ5QGS0 1516 aa26.24■■□□□ 1.79
SNX17-201ENST00000233575 NUTM2DQ5VT03 806 aaPredicted RBP26.22■■□□□ 1.79
SNX17-201ENST00000233575 PLPPR3Q6T4P5 718 aa26.22■■□□□ 1.79
SNX17-201ENST00000233575 NRXN1Q9ULB1 1477 aa26.22■■□□□ 1.79
SNX17-201ENST00000233575 GPRASP1Q5JY77 1395 aa26.21■■□□□ 1.79
SNX17-201ENST00000233575 TNRQ92752 1358 aa26.21■■□□□ 1.79
SNX17-201ENST00000233575 RPGRIP1LQ68CZ1 1315 aa26.2■■□□□ 1.79
SNX17-201ENST00000233575 STAG3Q9UJ98 1225 aa26.17■■□□□ 1.78
SNX17-201ENST00000233575 A2ML1A8K2U0 1454 aa26.17■■□□□ 1.78
SNX17-201ENST00000233575 RIMS1Q86UR5 1692 aaKnown RBP26.17■■□□□ 1.78
SNX17-201ENST00000233575 LAMC1P11047 1609 aa26.17■■□□□ 1.78
SNX17-201ENST00000233575 ADAMTSL3P82987 1691 aa26.16■■□□□ 1.78
SNX17-201ENST00000233575 CFAP70Q5T0N1 1121 aa26.16■■□□□ 1.78
SNX17-201ENST00000233575 PIK3C2GO75747 1445 aa26.15■■□□□ 1.78
SNX17-201ENST00000233575 KIAA1210Q9ULL0 1709 aa26.15■■□□□ 1.78
SNX17-201ENST00000233575 C11orf95C9JLR9 678 aaPredicted RBP26.14■■□□□ 1.78
SNX17-201ENST00000233575 ST20-MTHFSA0A0A6YYL1 179 aa26.12■■□□□ 1.77
SNX17-201ENST00000233575 WASHC2AQ641Q2 1341 aa26.11■■□□□ 1.77
SNX17-201ENST00000233575 VGFO15240 615 aaPredicted RBP26.1■■□□□ 1.77
SNX17-201ENST00000233575 SENP3Q9H4L4 574 aaPredicted RBP26.1■■□□□ 1.77
SNX17-201ENST00000233575 DDX10Q13206 875 aaKnown RBP26.1■■□□□ 1.77
SNX17-201ENST00000233575 UBR1Q8IWV7 1749 aa26.08■■□□□ 1.77
SNX17-201ENST00000233575 IQGAP1P46940 1657 aa26.08■■□□□ 1.77
SNX17-201ENST00000233575 ZFYVE9O95405 1425 aa26.08■■□□□ 1.77
SNX17-201ENST00000233575 C14orf93Q9H972 538 aaKnown RBP26.06■■□□□ 1.76
SNX17-201ENST00000233575 NLRP1Q9C000 1473 aa26.06■■□□□ 1.76
SNX17-201ENST00000233575 RIMS2Q9UQ26 1411 aa26.06■■□□□ 1.76
SNX17-201ENST00000233575 KDM5AP29375 1690 aaKnown RBP26.04■■□□□ 1.76
SNX17-201ENST00000233575 CCDC7Q96M83 1385 aa26.03■■□□□ 1.76
SNX17-201ENST00000233575 POLR1AO95602 1720 aaPredicted RBP26.03■■□□□ 1.76
SNX17-201ENST00000233575 SCAF11Q99590 1463 aaKnown RBP26.03■■□□□ 1.76
SNX17-201ENST00000233575 KIF7Q2M1P5 1343 aa26.02■■□□□ 1.76
SNX17-201ENST00000233575 ADGRB1O14514 1584 aa26.02■■□□□ 1.76
SNX17-201ENST00000233575 SETBP1Q9Y6X0 1596 aa26.02■■□□□ 1.76
SNX17-201ENST00000233575 MYO3AQ8NEV4 1616 aa26.01■■□□□ 1.76
SNX17-201ENST00000233575 TMEM132EQ6IEE7 984 aa26■■□□□ 1.75
SNX17-201ENST00000233575 TMEM2Q9UHN6 1383 aa25.98■■□□□ 1.75
SNX17-201ENST00000233575 TESK2Q96S53 571 aa25.97■■□□□ 1.75
SNX17-201ENST00000233575 MIER1Q8N108 512 aa25.96■■□□□ 1.75
SNX17-201ENST00000233575 ASXL1Q8IXJ9 1541 aa25.96■■□□□ 1.75
SNX17-201ENST00000233575 ALKQ9UM73 1620 aa25.94■■□□□ 1.74
SNX17-201ENST00000233575 POLR3GLQ9BT43 218 aa25.93■■□□□ 1.74
SNX17-201ENST00000233575 PTPRMP28827 1452 aa25.92■■□□□ 1.74
SNX17-201ENST00000233575 NRXN3Q9Y4C0 1643 aa25.92■■□□□ 1.74
SNX17-201ENST00000233575 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.92■■□□□ 1.74
SNX17-201ENST00000233575 TRAK1Q9UPV9 953 aa25.92■■□□□ 1.74
SNX17-201ENST00000233575 CEP170BQ9Y4F5 1589 aaPredicted RBP25.91■■□□□ 1.74
SNX17-201ENST00000233575 DISP3Q9P2K9 1392 aa25.9■■□□□ 1.74
SNX17-201ENST00000233575 EIF3AQ14152 1382 aaKnown RBP25.9■■□□□ 1.74
SNX17-201ENST00000233575 LTKP29376 864 aa25.9■■□□□ 1.74
SNX17-201ENST00000233575 SETD1AO15047 1707 aaKnown RBP25.89■■□□□ 1.73
SNX17-201ENST00000233575 ARHGAP23Q9P227 1491 aa25.87■■□□□ 1.73
SNX17-201ENST00000233575 SLIT1O75093 1534 aa25.87■■□□□ 1.73
SNX17-201ENST00000233575 HDGFP51858 240 aaKnown RBP25.86■■□□□ 1.73
SNX17-201ENST00000233575 ARHGEF28Q8N1W1 1705 aaKnown RBP25.85■■□□□ 1.73
SNX17-201ENST00000233575 THEMISQ8N1K5 641 aaPredicted RBP25.85■■□□□ 1.73
SNX17-201ENST00000233575 TXNDC2Q86VQ3 553 aa25.84■■□□□ 1.73
SNX17-201ENST00000233575 STK26Q9P289 416 aa25.84■■□□□ 1.73
SNX17-201ENST00000233575 ZNF142P52746 1687 aaPredicted RBP25.84■■□□□ 1.73
SNX17-201ENST00000233575 SETD1BQ9UPS6 1966 aaKnown RBP25.84■■□□□ 1.73
SNX17-201ENST00000233575 TMF1P82094 1093 aa25.82■■□□□ 1.72
SNX17-201ENST00000233575 YTHDC2Q9H6S0 1430 aaKnown RBP25.82■■□□□ 1.72
SNX17-201ENST00000233575 CENPJQ9HC77 1338 aaPredicted RBP25.81■■□□□ 1.72
SNX17-201ENST00000233575 QRICH2Q9H0J4 1663 aa25.8■■□□□ 1.72
SNX17-201ENST00000233575 BCANQ96GW7 911 aa25.8■■□□□ 1.72
SNX17-201ENST00000233575 PLEKHG1Q9ULL1 1385 aa25.79■■□□□ 1.72
SNX17-201ENST00000233575 EID1Q9Y6B2 187 aa25.79■■□□□ 1.72
SNX17-201ENST00000233575 METP08581 1390 aa25.79■■□□□ 1.72
SNX17-201ENST00000233575 ADAMTS13Q76LX8 1427 aa25.78■■□□□ 1.72
SNX17-201ENST00000233575 SBNO2Q9Y2G9 1366 aa25.75■■□□□ 1.71
SNX17-201ENST00000233575 KDM4FA0A1W2PPD8 638 aa25.74■■□□□ 1.71
SNX17-201ENST00000233575 SAFB2Q14151 953 aaKnown RBP eCLIP25.74■■□□□ 1.71
SNX17-201ENST00000233575 SLC26A8Q96RN1 970 aa25.72■■□□□ 1.71
SNX17-201ENST00000233575 LRPPRCP42704 1394 aaKnown RBP25.72■■□□□ 1.71
SNX17-201ENST00000233575 MED14O60244 1454 aa25.71■■□□□ 1.71
SNX17-201ENST00000233575 PRAM1Q96QH2 718 aa25.71■■□□□ 1.71
SNX17-201ENST00000233575 ANP32CO43423 234 aa25.69■■□□□ 1.7
SNX17-201ENST00000233575 ABCC11Q96J66 1382 aa25.67■■□□□ 1.7
SNX17-201ENST00000233575 DLC1Q96QB1 1528 aa25.67■■□□□ 1.7
SNX17-201ENST00000233575 PLEKHH1Q9ULM0 1364 aa25.66■■□□□ 1.7
SNX17-201ENST00000233575 CDCA8Q53HL2 280 aa25.66■■□□□ 1.7
SNX17-201ENST00000233575 POGKQ9P215 609 aa25.66■■□□□ 1.7
SNX17-201ENST00000233575 TULP4Q9NRJ4 1543 aa25.66■■□□□ 1.7
SNX17-201ENST00000233575 MYOM1P52179 1685 aa25.66■■□□□ 1.7
SNX17-201ENST00000233575 WAPLQ7Z5K2 1190 aa25.65■■□□□ 1.7
SNX17-201ENST00000233575 ANKLE2Q86XL3 938 aa25.64■■□□□ 1.7
SNX17-201ENST00000233575 KNDC1Q76NI1 1749 aa25.64■■□□□ 1.7
SNX17-201ENST00000233575 SLC24A1O60721 1099 aa25.64■■□□□ 1.69
SNX17-201ENST00000233575 MINK1Q8N4C8 1332 aaPredicted RBP25.63■■□□□ 1.69
SNX17-201ENST00000233575 PTPRUQ92729 1446 aa25.63■■□□□ 1.69
SNX17-201ENST00000233575 TECPR2O15040 1411 aa25.62■■□□□ 1.69
SNX17-201ENST00000233575 TBX22Q9Y458 520 aa25.61■■□□□ 1.69
SNX17-201ENST00000233575 PANK3Q9H999 370 aa25.61■■□□□ 1.69
SNX17-201ENST00000233575 CPS1P31327 1500 aa25.6■■□□□ 1.69
SNX17-201ENST00000233575 DIP2AQ14689 1571 aa25.6■■□□□ 1.69
SNX17-201ENST00000233575 CNGB1Q14028 1251 aaPredicted RBP25.59■■□□□ 1.69
SNX17-201ENST00000233575 ROBO2Q9HCK4 1378 aa25.58■■□□□ 1.69
SNX17-201ENST00000233575 EVC2Q86UK5 1308 aa25.58■■□□□ 1.69
SNX17-201ENST00000233575 PRKRIP1Q9H875 184 aaPredicted RBP25.57■■□□□ 1.68
SNX17-201ENST00000233575 PER1O15534 1290 aaPredicted RBP25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 77.7 ms