RNA–Protein interactions for RNA: ENST00000229729.10

SLC44A4-202, Transcript of solute carrier family 44 member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC44A4, Length 2,589 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A4-202ENST00000229729 ERBINQ96RT1 1412 aa16.24■□□□□ 0.19
SLC44A4-202ENST00000229729 SHANK2Q9UPX8 1470 aa16.23■□□□□ 0.19
SLC44A4-202ENST00000229729 TBC1D32Q96NH3 1257 aa16.23■□□□□ 0.19
SLC44A4-202ENST00000229729 TESK2Q96S53 571 aa16.23■□□□□ 0.19
SLC44A4-202ENST00000229729 TBC1D2Q9BYX2 928 aa16.23■□□□□ 0.19
SLC44A4-202ENST00000229729 ISY1Q9ULR0 285 aaKnown RBP16.23■□□□□ 0.19
SLC44A4-202ENST00000229729 PDE3AQ14432 1141 aa16.21■□□□□ 0.19
SLC44A4-202ENST00000229729 TMF1P82094 1093 aa16.21■□□□□ 0.18
SLC44A4-202ENST00000229729 PLB1Q6P1J6 1458 aa16.2■□□□□ 0.18
SLC44A4-202ENST00000229729 ESPNB1AK53 854 aa16.2■□□□□ 0.18
SLC44A4-202ENST00000229729 PPP2R1AP30153 589 aa16.2■□□□□ 0.18
SLC44A4-202ENST00000229729 CLUAP1Q96AJ1 413 aa16.2■□□□□ 0.18
SLC44A4-202ENST00000229729 CCDC144AA2RUR9 1427 aa16.2■□□□□ 0.18
SLC44A4-202ENST00000229729 MYH16Q9H6N6 1097 aa16.2■□□□□ 0.18
SLC44A4-202ENST00000229729 TRAK2O60296 914 aa16.19■□□□□ 0.18
SLC44A4-202ENST00000229729 GZF1Q9H116 711 aaPredicted RBP16.19■□□□□ 0.18
SLC44A4-202ENST00000229729 ZNF777Q9ULD5 760 aaPredicted RBP16.19■□□□□ 0.18
SLC44A4-202ENST00000229729 TPM2P07951 284 aa16.19■□□□□ 0.18
SLC44A4-202ENST00000229729 NBPF1Q3BBV0 1214 aa16.19■□□□□ 0.18
SLC44A4-202ENST00000229729 C9orf84Q5VXU9 1444 aa16.18■□□□□ 0.18
SLC44A4-202ENST00000229729 CDC42BPAQ5VT25 1732 aa16.18■□□□□ 0.18
SLC44A4-202ENST00000229729 SYNJ2O15056 1496 aa16.18■□□□□ 0.18
SLC44A4-202ENST00000229729 BCAR3O75815 825 aa16.18■□□□□ 0.18
SLC44A4-202ENST00000229729 CHMP5Q9NZZ3 219 aa16.18■□□□□ 0.18
SLC44A4-202ENST00000229729 EIF2AK4Q9P2K8 1649 aaKnown RBP16.18■□□□□ 0.18
SLC44A4-202ENST00000229729 ABCC2Q92887 1545 aa16.17■□□□□ 0.18
SLC44A4-202ENST00000229729 E9PSI1 815 aa16.17■□□□□ 0.18
SLC44A4-202ENST00000229729 GRPEL1Q9HAV7 217 aa16.17■□□□□ 0.18
SLC44A4-202ENST00000229729 ABCC10Q5T3U5 1492 aa16.17■□□□□ 0.18
SLC44A4-202ENST00000229729 PIK3C2GO75747 1445 aa16.17■□□□□ 0.18
SLC44A4-202ENST00000229729 CENPJQ9HC77 1338 aaPredicted RBP16.16■□□□□ 0.18
SLC44A4-202ENST00000229729 AAMPQ13685 434 aa16.16■□□□□ 0.18
SLC44A4-202ENST00000229729 PLXNC1O60486 1568 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 NUP160Q12769 1436 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 DDX11L8A8MPP1 907 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 PMFBP1Q8TBY8 1022 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 KNSTRNQ9Y448 316 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 CARMIL2Q6F5E8 1435 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 ABCA8O94911 1581 aa16.15■□□□□ 0.18
SLC44A4-202ENST00000229729 NGEFQ8N5V2 710 aa16.14■□□□□ 0.17
SLC44A4-202ENST00000229729 TRIM44Q96DX7 344 aaPredicted RBP16.14■□□□□ 0.17
SLC44A4-202ENST00000229729 PDCL3Q9H2J4 239 aa16.14■□□□□ 0.17
SLC44A4-202ENST00000229729 A2MP01023 1474 aa16.14■□□□□ 0.17
SLC44A4-202ENST00000229729 SPINK5Q9NQ38 1064 aaPredicted RBP16.13■□□□□ 0.17
SLC44A4-202ENST00000229729 MAGI2Q86UL8 1455 aa16.13■□□□□ 0.17
SLC44A4-202ENST00000229729 WDR7Q9Y4E6 1490 aa16.13■□□□□ 0.17
SLC44A4-202ENST00000229729 ERBB4Q15303 1308 aa16.13■□□□□ 0.17
SLC44A4-202ENST00000229729 FAM135AQ9P2D6 1515 aa16.12■□□□□ 0.17
SLC44A4-202ENST00000229729 CANXP27824 592 aaKnown RBP16.12■□□□□ 0.17
SLC44A4-202ENST00000229729 COG6Q9Y2V7 657 aa16.11■□□□□ 0.17
SLC44A4-202ENST00000229729 ARHGEF5Q12774 1597 aa16.11■□□□□ 0.17
SLC44A4-202ENST00000229729 AMER1Q5JTC6 1135 aaPredicted RBP16.11■□□□□ 0.17
SLC44A4-202ENST00000229729 CCDC141Q6ZP82 1450 aa16.11■□□□□ 0.17
SLC44A4-202ENST00000229729 APAF1O14727 1248 aa16.1■□□□□ 0.17
SLC44A4-202ENST00000229729 ASXL1Q8IXJ9 1541 aa16.1■□□□□ 0.17
SLC44A4-202ENST00000229729 TSPY4P0CV99 314 aa16.09■□□□□ 0.17
SLC44A4-202ENST00000229729 TSPY10P0CW01 314 aa16.09■□□□□ 0.17
SLC44A4-202ENST00000229729 CCDC146Q8IYE0 955 aa16.09■□□□□ 0.17
SLC44A4-202ENST00000229729 SPRYD3Q8NCJ5 442 aa16.09■□□□□ 0.17
SLC44A4-202ENST00000229729 PANK1Q8TE04 598 aa16.09■□□□□ 0.17
SLC44A4-202ENST00000229729 SYNMO15061 1565 aa16.09■□□□□ 0.17
SLC44A4-202ENST00000229729 RGL3Q3MIN7 710 aa16.08■□□□□ 0.17
SLC44A4-202ENST00000229729 RNF17Q9BXT8 1623 aaKnown RBP16.08■□□□□ 0.16
SLC44A4-202ENST00000229729 NPC1L1Q9UHC9 1359 aa16.08■□□□□ 0.16
SLC44A4-202ENST00000229729 RTEL1-TNFRSF6BF6WH68 1400 aa16.07■□□□□ 0.16
SLC44A4-202ENST00000229729 PDZRN3Q9UPQ7 1066 aa16.07■□□□□ 0.16
SLC44A4-202ENST00000229729 MYO5CQ9NQX4 1742 aa16.07■□□□□ 0.16
SLC44A4-202ENST00000229729 CHMP7Q8WUX9 453 aaPredicted RBP16.07■□□□□ 0.16
SLC44A4-202ENST00000229729 ATP10BO94823 1461 aa16.06■□□□□ 0.16
SLC44A4-202ENST00000229729 CALD1Q05682 793 aaKnown RBP16.06■□□□□ 0.16
SLC44A4-202ENST00000229729 C22orf23Q9BZE7 217 aa16.06■□□□□ 0.16
SLC44A4-202ENST00000229729 HSCBQ8IWL3 235 aa16.05■□□□□ 0.16
SLC44A4-202ENST00000229729 CDCA8Q53HL2 280 aa16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 RWDD1Q9H446 243 aaPredicted RBP16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 NCOA3Q9Y6Q9 1424 aa16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 PTMSP20962 102 aa16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 JPH4Q96JJ6 628 aa16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 ZNF692Q9BU19 519 aaPredicted RBP16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 PLA2R1Q13018 1463 aa16.04■□□□□ 0.16
SLC44A4-202ENST00000229729 SCAPERQ9BY12 1400 aa16.03■□□□□ 0.16
SLC44A4-202ENST00000229729 PCDHB15Q9Y5E8 787 aa16.03■□□□□ 0.16
SLC44A4-202ENST00000229729 PLEKHD1A6NEE1 506 aa16.03■□□□□ 0.16
SLC44A4-202ENST00000229729 SKOR2Q2VWA4 1001 aaPredicted RBP16.03■□□□□ 0.16
SLC44A4-202ENST00000229729 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
SLC44A4-202ENST00000229729 DMRT2Q9Y5R5 561 aa16.02■□□□□ 0.15
SLC44A4-202ENST00000229729 TERF1P54274 439 aa16.01■□□□□ 0.15
SLC44A4-202ENST00000229729 CCDC173Q0VFZ6 552 aa16.01■□□□□ 0.15
SLC44A4-202ENST00000229729 DDIT3P35638 169 aa16.01■□□□□ 0.15
SLC44A4-202ENST00000229729 GBP4Q96PP9 640 aa16.01■□□□□ 0.15
SLC44A4-202ENST00000229729 CIZ1Q9ULV3 898 aaPredicted RBP16.01■□□□□ 0.15
SLC44A4-202ENST00000229729 PREX2Q70Z35 1606 aa16.01■□□□□ 0.15
SLC44A4-202ENST00000229729 ERCC6Q03468 1493 aa16■□□□□ 0.15
SLC44A4-202ENST00000229729 UNC13BO14795 1591 aa16■□□□□ 0.15
SLC44A4-202ENST00000229729 IQGAP1P46940 1657 aa16■□□□□ 0.15
SLC44A4-202ENST00000229729 MFAP1P55081 439 aaKnown RBP15.99■□□□□ 0.15
SLC44A4-202ENST00000229729 GAS2L3Q86XJ1 694 aa15.99■□□□□ 0.15
SLC44A4-202ENST00000229729 SAMD9LQ8IVG5 1584 aa15.99■□□□□ 0.15
SLC44A4-202ENST00000229729 OFD1O75665 1012 aa15.99■□□□□ 0.15
SLC44A4-202ENST00000229729 RARSP54136 660 aaKnown RBP15.99■□□□□ 0.15
SLC44A4-202ENST00000229729 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms