RNA–Protein interactions for RNA: ENST00000229570.9

SMIM8-201, Transcript of small integral membrane protein 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM8, Length 2,405 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM8-201ENST00000229570 ATP1B4Q9UN42 357 aaPredicted RBP12.36□□□□□ -0.43
SMIM8-201ENST00000229570 RNF17Q9BXT8 1623 aaKnown RBP12.36□□□□□ -0.43
SMIM8-201ENST00000229570 CLTCQ00610 1675 aaKnown RBP12.35□□□□□ -0.43
SMIM8-201ENST00000229570 DHX29Q7Z478 1369 aaKnown RBP12.34□□□□□ -0.43
SMIM8-201ENST00000229570 PTPRKQ15262 1439 aa12.34□□□□□ -0.43
SMIM8-201ENST00000229570 KDM5DQ9BY66 1539 aa12.34□□□□□ -0.43
SMIM8-201ENST00000229570 LTBP4Q8N2S1 1624 aa12.34□□□□□ -0.43
SMIM8-201ENST00000229570 A2ML1A8K2U0 1454 aa12.34□□□□□ -0.43
SMIM8-201ENST00000229570 CEP170BQ9Y4F5 1589 aaPredicted RBP12.34□□□□□ -0.43
SMIM8-201ENST00000229570 TCOF1Q13428 1488 aaKnown RBP12.33□□□□□ -0.43
SMIM8-201ENST00000229570 MIA2Q96PC5 1412 aa12.33□□□□□ -0.43
SMIM8-201ENST00000229570 PNNQ9H307 717 aaKnown RBP12.33□□□□□ -0.43
SMIM8-201ENST00000229570 CFDP1Q9UEE9 299 aaPredicted RBP12.33□□□□□ -0.43
SMIM8-201ENST00000229570 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.33□□□□□ -0.44
SMIM8-201ENST00000229570 ZMYM3Q14202 1370 aa12.32□□□□□ -0.44
SMIM8-201ENST00000229570 DEPDC5O75140 1603 aa12.32□□□□□ -0.44
SMIM8-201ENST00000229570 CLCN1P35523 988 aa12.31□□□□□ -0.44
SMIM8-201ENST00000229570 PZPP20742 1482 aa12.31□□□□□ -0.44
SMIM8-201ENST00000229570 NLRP1Q9C000 1473 aa12.31□□□□□ -0.44
SMIM8-201ENST00000229570 CAMSAP1Q5T5Y3 1602 aa12.31□□□□□ -0.44
SMIM8-201ENST00000229570 POLR1AO95602 1720 aaPredicted RBP12.31□□□□□ -0.44
SMIM8-201ENST00000229570 L1TD1Q5T7N2 865 aaKnown RBP12.3□□□□□ -0.44
SMIM8-201ENST00000229570 CPS1P31327 1500 aa12.3□□□□□ -0.44
SMIM8-201ENST00000229570 SHANK2Q9UPX8 1470 aa12.29□□□□□ -0.44
SMIM8-201ENST00000229570 POGKQ9P215 609 aa12.29□□□□□ -0.44
SMIM8-201ENST00000229570 CAMSAP2Q08AD1 1489 aa12.29□□□□□ -0.44
SMIM8-201ENST00000229570 KDM5AP29375 1690 aaKnown RBP12.29□□□□□ -0.44
SMIM8-201ENST00000229570 MLECQ14165 292 aa12.28□□□□□ -0.44
SMIM8-201ENST00000229570 KIF7Q2M1P5 1343 aa12.27□□□□□ -0.44
SMIM8-201ENST00000229570 HFM1A2PYH4 1435 aa12.27□□□□□ -0.44
SMIM8-201ENST00000229570 SENP3-EIF4A1A0A087X0R7 540 aa12.27□□□□□ -0.44
SMIM8-201ENST00000229570 SKAP1Q86WV1 359 aa12.27□□□□□ -0.44
SMIM8-201ENST00000229570 DNMT1P26358 1616 aaKnown RBP12.27□□□□□ -0.45
SMIM8-201ENST00000229570 RBM10P98175 930 aaKnown RBP12.27□□□□□ -0.45
SMIM8-201ENST00000229570 POTEDQ86YR6 584 aa12.27□□□□□ -0.45
SMIM8-201ENST00000229570 RCAN3Q9UKA8 241 aa12.27□□□□□ -0.45
SMIM8-201ENST00000229570 MED14O60244 1454 aa12.26□□□□□ -0.45
SMIM8-201ENST00000229570 PNISRQ8TF01 805 aaKnown RBP12.26□□□□□ -0.45
SMIM8-201ENST00000229570 SENP3Q9H4L4 574 aaPredicted RBP12.26□□□□□ -0.45
SMIM8-201ENST00000229570 SPATA31D1Q6ZQQ2 1576 aa12.25□□□□□ -0.45
SMIM8-201ENST00000229570 HSPA2P54652 639 aa12.25□□□□□ -0.45
SMIM8-201ENST00000229570 CROCC2H7BZ55 1655 aa12.24□□□□□ -0.45
SMIM8-201ENST00000229570 DUOX2Q9NRD8 1548 aa12.24□□□□□ -0.45
SMIM8-201ENST00000229570 PTPN23Q9H3S7 1636 aa12.24□□□□□ -0.45
SMIM8-201ENST00000229570 ARHGAP31Q2M1Z3 1444 aa12.24□□□□□ -0.45
SMIM8-201ENST00000229570 A0A0U1RQG5 324 aaPredicted RBP12.23□□□□□ -0.45
SMIM8-201ENST00000229570 AAMPQ13685 434 aa12.23□□□□□ -0.45
SMIM8-201ENST00000229570 CENPJQ9HC77 1338 aaPredicted RBP12.23□□□□□ -0.45
SMIM8-201ENST00000229570 SYNMO15061 1565 aa12.23□□□□□ -0.45
SMIM8-201ENST00000229570 MYOM3Q5VTT5 1437 aa12.23□□□□□ -0.45
SMIM8-201ENST00000229570 HNRNPMP52272 730 aaKnown RBP eCLIP12.23□□□□□ -0.45
SMIM8-201ENST00000229570 XRCC6P12956 609 aaKnown RBP eCLIP12.21□□□□□ -0.45
SMIM8-201ENST00000229570 CALD1Q05682 793 aaKnown RBP12.21□□□□□ -0.45
SMIM8-201ENST00000229570 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
SMIM8-201ENST00000229570 PRDM4Q9UKN5 801 aa12.21□□□□□ -0.45
SMIM8-201ENST00000229570 TNRQ92752 1358 aa12.21□□□□□ -0.45
SMIM8-201ENST00000229570 NAIPQ13075 1403 aa12.21□□□□□ -0.45
SMIM8-201ENST00000229570 ERBINQ96RT1 1412 aa12.21□□□□□ -0.45
SMIM8-201ENST00000229570 C8orf34Q49A92 452 aa12.21□□□□□ -0.46
SMIM8-201ENST00000229570 PDCL3Q9H2J4 239 aa12.21□□□□□ -0.46
SMIM8-201ENST00000229570 SPATA31E1Q6ZUB1 1445 aa12.21□□□□□ -0.46
SMIM8-201ENST00000229570 CEBPAP49715 358 aaPredicted RBP12.2□□□□□ -0.46
SMIM8-201ENST00000229570 LMTK2Q8IWU2 1503 aa12.2□□□□□ -0.46
SMIM8-201ENST00000229570 PRDM15P57071 1507 aaPredicted RBP12.2□□□□□ -0.46
SMIM8-201ENST00000229570 LRPPRCP42704 1394 aaKnown RBP12.19□□□□□ -0.46
SMIM8-201ENST00000229570 FGD1P98174 961 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 L3MBTL2Q969R5 705 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 NEURL4Q96JN8 1562 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 ABCC3O15438 1527 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 TSPY4P0CV99 314 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 TSPY10P0CW01 314 aa12.19□□□□□ -0.46
SMIM8-201ENST00000229570 ZNF777Q9ULD5 760 aaPredicted RBP12.19□□□□□ -0.46
SMIM8-201ENST00000229570 TMC1Q8TDI8 760 aa12.18□□□□□ -0.46
SMIM8-201ENST00000229570 FSD2A1L4K1 749 aa12.18□□□□□ -0.46
SMIM8-201ENST00000229570 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
SMIM8-201ENST00000229570 KDM2BQ8NHM5 1336 aa12.17□□□□□ -0.46
SMIM8-201ENST00000229570 MROH1Q8NDA8 1641 aa12.17□□□□□ -0.46
SMIM8-201ENST00000229570 KTN1Q86UP2 1357 aaKnown RBP12.17□□□□□ -0.46
SMIM8-201ENST00000229570 GOLGA6L3A6NEY3 463 aa12.17□□□□□ -0.46
SMIM8-201ENST00000229570 CRBNQ96SW2 442 aa12.17□□□□□ -0.46
SMIM8-201ENST00000229570 PANK2Q9BZ23 570 aa12.16□□□□□ -0.46
SMIM8-201ENST00000229570 TPM2P07951 284 aa12.16□□□□□ -0.46
SMIM8-201ENST00000229570 THEMISQ8N1K5 641 aaPredicted RBP12.16□□□□□ -0.46
SMIM8-201ENST00000229570 SLIT1O75093 1534 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 PDE3BQ13370 1112 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 NBPF8Q3BBV2 869 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 IQGAP1P46940 1657 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 ERVK-7P63135 1459 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 VWDEQ8N2E2 1590 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 UGGT1Q9NYU2 1555 aa12.15□□□□□ -0.46
SMIM8-201ENST00000229570 PLIN1O60240 522 aa12.15□□□□□ -0.47
SMIM8-201ENST00000229570 PHF23Q9BUL5 403 aaPredicted RBP12.15□□□□□ -0.47
SMIM8-201ENST00000229570 ARHGAP23Q9P227 1491 aa12.14□□□□□ -0.47
SMIM8-201ENST00000229570 CENPQQ7L2Z9 268 aaPredicted RBP12.13□□□□□ -0.47
SMIM8-201ENST00000229570 ADGRL2O95490 1459 aa12.13□□□□□ -0.47
SMIM8-201ENST00000229570 RGS3P49796 1198 aa12.13□□□□□ -0.47
SMIM8-201ENST00000229570 ARXQ96QS3 562 aa12.13□□□□□ -0.47
SMIM8-201ENST00000229570 UBR1Q8IWV7 1749 aa12.13□□□□□ -0.47
SMIM8-201ENST00000229570 ESPNB1AK53 854 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms