RNA–Protein interactions for RNA: ENST00000229251.7

COPS7A-201, Transcript of COP9 signalosome subunit 7A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS7A, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-201ENST00000229251 ZC3H13Q5T200 1668 aaKnown RBP18.53■□□□□ 0.56
COPS7A-201ENST00000229251 EIF2AK4Q9P2K8 1649 aaKnown RBP18.53■□□□□ 0.56
COPS7A-201ENST00000229251 XIRP1Q702N8 1843 aaKnown RBP18.49■□□□□ 0.55
COPS7A-201ENST00000229251 EIF4G2P78344 907 aaKnown RBP eCLIP18.47■□□□□ 0.55
COPS7A-201ENST00000229251 FAM135BQ49AJ0 1406 aa18.47■□□□□ 0.55
COPS7A-201ENST00000229251 POTEAQ6S8J7 498 aa18.47■□□□□ 0.55
COPS7A-201ENST00000229251 SCAF11Q99590 1463 aaKnown RBP18.46■□□□□ 0.55
COPS7A-201ENST00000229251 UBR1Q8IWV7 1749 aa18.46■□□□□ 0.55
COPS7A-201ENST00000229251 ERVK-7P63135 1459 aa18.45■□□□□ 0.54
COPS7A-201ENST00000229251 ABCC3O15438 1527 aa18.43■□□□□ 0.54
COPS7A-201ENST00000229251 CCDC144AA2RUR9 1427 aa18.43■□□□□ 0.54
COPS7A-201ENST00000229251 RALGAPBQ86X10 1494 aa18.43■□□□□ 0.54
COPS7A-201ENST00000229251 TET3O43151 1660 aa18.43■□□□□ 0.54
COPS7A-201ENST00000229251 SPATA31E1Q6ZUB1 1445 aa18.42■□□□□ 0.54
COPS7A-201ENST00000229251 PRDM15P57071 1507 aaPredicted RBP18.42■□□□□ 0.54
COPS7A-201ENST00000229251 SETD1AO15047 1707 aaKnown RBP18.41■□□□□ 0.54
COPS7A-201ENST00000229251 HSPA5P11021 654 aaKnown RBP18.4■□□□□ 0.54
COPS7A-201ENST00000229251 DDX10Q13206 875 aaKnown RBP18.4■□□□□ 0.54
COPS7A-201ENST00000229251 NBPF8Q3BBV2 869 aa18.4■□□□□ 0.54
COPS7A-201ENST00000229251 SLIT1O75093 1534 aa18.4■□□□□ 0.54
COPS7A-201ENST00000229251 ARHGAP23Q9P227 1491 aa18.4■□□□□ 0.54
COPS7A-201ENST00000229251 CFAP65Q6ZU64 1925 aaKnown RBP18.39■□□□□ 0.53
COPS7A-201ENST00000229251 E9PCH4 1651 aa18.39■□□□□ 0.53
COPS7A-201ENST00000229251 ROBO1Q9Y6N7 1651 aa18.39■□□□□ 0.53
COPS7A-201ENST00000229251 SPHKAPQ2M3C7 1700 aa18.38■□□□□ 0.53
COPS7A-201ENST00000229251 TXNDC2Q86VQ3 553 aa18.37■□□□□ 0.53
COPS7A-201ENST00000229251 TRPM2O94759 1503 aa18.37■□□□□ 0.53
COPS7A-201ENST00000229251 CEP152O94986 1710 aa18.36■□□□□ 0.53
COPS7A-201ENST00000229251 LAMC1P11047 1609 aa18.35■□□□□ 0.53
COPS7A-201ENST00000229251 LTKP29376 864 aa18.35■□□□□ 0.53
COPS7A-201ENST00000229251 HIRIP3Q9BW71 556 aaPredicted RBP18.35■□□□□ 0.53
COPS7A-201ENST00000229251 EID1Q9Y6B2 187 aa18.35■□□□□ 0.53
COPS7A-201ENST00000229251 MROH1Q8NDA8 1641 aa18.35■□□□□ 0.53
COPS7A-201ENST00000229251 KANK1Q14678 1352 aa18.35■□□□□ 0.53
COPS7A-201ENST00000229251 TRPM1Q7Z4N2 1603 aa18.34■□□□□ 0.53
COPS7A-201ENST00000229251 TMEM94Q12767 1356 aa18.33■□□□□ 0.53
COPS7A-201ENST00000229251 CCER2I3L3R5 266 aa18.32■□□□□ 0.52
COPS7A-201ENST00000229251 WASHC2AQ641Q2 1341 aa18.32■□□□□ 0.52
COPS7A-201ENST00000229251 LMTK2Q8IWU2 1503 aa18.32■□□□□ 0.52
COPS7A-201ENST00000229251 ANP32CO43423 234 aa18.32■□□□□ 0.52
COPS7A-201ENST00000229251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.32■□□□□ 0.52
COPS7A-201ENST00000229251 CCDC7Q96M83 1385 aa18.31■□□□□ 0.52
COPS7A-201ENST00000229251 USP47Q96K76 1375 aa18.3■□□□□ 0.52
COPS7A-201ENST00000229251 PHLPP1O60346 1717 aa18.3■□□□□ 0.52
COPS7A-201ENST00000229251 JCADQ9P266 1359 aa18.29■□□□□ 0.52
COPS7A-201ENST00000229251 PRAG1Q86YV5 1406 aa18.29■□□□□ 0.52
COPS7A-201ENST00000229251 KCNA6P17658 529 aa18.29■□□□□ 0.52
COPS7A-201ENST00000229251 ARHGAP31Q2M1Z3 1444 aa18.29■□□□□ 0.52
COPS7A-201ENST00000229251 KDM5AP29375 1690 aaKnown RBP18.28■□□□□ 0.52
COPS7A-201ENST00000229251 EFCAB6Q5THR3 1501 aa18.28■□□□□ 0.52
COPS7A-201ENST00000229251 TMEM2Q9UHN6 1383 aa18.28■□□□□ 0.52
COPS7A-201ENST00000229251 YTHDC1Q96MU7 727 aaKnown RBP18.28■□□□□ 0.52
COPS7A-201ENST00000229251 PIK3C2BO00750 1634 aa18.27■□□□□ 0.52
COPS7A-201ENST00000229251 NKTRP30414 1462 aaKnown RBP18.27■□□□□ 0.51
COPS7A-201ENST00000229251 PROSER2Q86WR7 435 aaPredicted RBP18.26■□□□□ 0.51
COPS7A-201ENST00000229251 STAC3Q96MF2 364 aa18.26■□□□□ 0.51
COPS7A-201ENST00000229251 UPF1Q92900 1129 aaKnown RBP eCLIP18.26■□□□□ 0.51
COPS7A-201ENST00000229251 GPRASP1Q5JY77 1395 aa18.25■□□□□ 0.51
COPS7A-201ENST00000229251 MSH6P52701 1360 aa18.24■□□□□ 0.51
COPS7A-201ENST00000229251 NWD1Q149M9 1564 aa18.24■□□□□ 0.51
COPS7A-201ENST00000229251 DCAF11Q8TEB1 546 aa18.24■□□□□ 0.51
COPS7A-201ENST00000229251 CLTCL1P53675 1640 aa18.24■□□□□ 0.51
COPS7A-201ENST00000229251 STAG3Q9UJ98 1225 aa18.23■□□□□ 0.51
COPS7A-201ENST00000229251 ZNF772Q68DY9 489 aaPredicted RBP18.22■□□□□ 0.51
COPS7A-201ENST00000229251 KIF1BO60333 1816 aa18.21■□□□□ 0.51
COPS7A-201ENST00000229251 ROCK2O75116 1388 aaKnown RBP18.21■□□□□ 0.51
COPS7A-201ENST00000229251 COL16A1Q07092 1604 aaPredicted RBP18.21■□□□□ 0.51
COPS7A-201ENST00000229251 KIF7Q2M1P5 1343 aa18.21■□□□□ 0.51
COPS7A-201ENST00000229251 ZNF326Q5BKZ1 582 aaKnown RBP18.2■□□□□ 0.5
COPS7A-201ENST00000229251 SLAIN2Q9P270 581 aa18.2■□□□□ 0.5
COPS7A-201ENST00000229251 SPATA31A6Q5VVP1 1343 aa18.2■□□□□ 0.5
COPS7A-201ENST00000229251 KIAA1210Q9ULL0 1709 aa18.2■□□□□ 0.5
COPS7A-201ENST00000229251 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
COPS7A-201ENST00000229251 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
COPS7A-201ENST00000229251 MEX3CQ5U5Q3 659 aaKnown RBP18.18■□□□□ 0.5
COPS7A-201ENST00000229251 SLC26A8Q96RN1 970 aa18.18■□□□□ 0.5
COPS7A-201ENST00000229251 LRP6O75581 1613 aa18.17■□□□□ 0.5
COPS7A-201ENST00000229251 C11orf95C9JLR9 678 aaPredicted RBP18.17■□□□□ 0.5
COPS7A-201ENST00000229251 KDM2AQ9Y2K7 1162 aa18.16■□□□□ 0.5
COPS7A-201ENST00000229251 IFT172Q9UG01 1749 aa18.15■□□□□ 0.5
COPS7A-201ENST00000229251 SHPRHQ149N8 1683 aa18.15■□□□□ 0.5
COPS7A-201ENST00000229251 CDK12Q9NYV4 1490 aaPredicted RBP18.15■□□□□ 0.5
COPS7A-201ENST00000229251 CHD2O14647 1828 aaKnown RBP18.14■□□□□ 0.49
COPS7A-201ENST00000229251 MYOM2P54296 1465 aa18.13■□□□□ 0.49
COPS7A-201ENST00000229251 ADGRB3O60242 1522 aa18.12■□□□□ 0.49
COPS7A-201ENST00000229251 IDI1Q13907 227 aa18.12■□□□□ 0.49
COPS7A-201ENST00000229251 RGL3Q3MIN7 710 aa18.12■□□□□ 0.49
COPS7A-201ENST00000229251 AHDC1Q5TGY3 1603 aaPredicted RBP18.12■□□□□ 0.49
COPS7A-201ENST00000229251 RXRBP28702 533 aa18.12■□□□□ 0.49
COPS7A-201ENST00000229251 NCOA3Q9Y6Q9 1424 aa18.11■□□□□ 0.49
COPS7A-201ENST00000229251 BCANQ96GW7 911 aa18.1■□□□□ 0.49
COPS7A-201ENST00000229251 GTF3C3Q9Y5Q9 886 aa18.09■□□□□ 0.49
COPS7A-201ENST00000229251 ST20-MTHFSA0A0A6YYL1 179 aa18.07■□□□□ 0.48
COPS7A-201ENST00000229251 NOS1P29475 1434 aa18.07■□□□□ 0.48
COPS7A-201ENST00000229251 PRKRIP1Q9H875 184 aaPredicted RBP18.06■□□□□ 0.48
COPS7A-201ENST00000229251 PLEKHG1Q9ULL1 1385 aa18.05■□□□□ 0.48
COPS7A-201ENST00000229251 SLC52A1Q9NWF4 448 aa18.05■□□□□ 0.48
COPS7A-201ENST00000229251 KTN1Q86UP2 1357 aaKnown RBP18.05■□□□□ 0.48
COPS7A-201ENST00000229251 NRXN1Q9ULB1 1477 aa18.04■□□□□ 0.48
COPS7A-201ENST00000229251 CADPS2Q86UW7 1296 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms