RNA–Protein interactions for RNA: ENST00000226247.2

FOXN1-201, Transcript of forkhead box N1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1-201ENST00000226247 ASXL2Q76L83 1435 aa13.29□□□□□ -0.28
FOXN1-201ENST00000226247 GGT6Q6P531 493 aa13.29□□□□□ -0.28
FOXN1-201ENST00000226247 EFCAB2Q5VUJ9 269 aa13.28□□□□□ -0.28
FOXN1-201ENST00000226247 PANK2Q9BZ23 570 aa13.27□□□□□ -0.28
FOXN1-201ENST00000226247 COG6Q9Y2V7 657 aa13.27□□□□□ -0.28
FOXN1-201ENST00000226247 CLASP1Q7Z460 1538 aa13.27□□□□□ -0.28
FOXN1-201ENST00000226247 UHRF1BP1Q6BDS2 1440 aa13.27□□□□□ -0.28
FOXN1-201ENST00000226247 PPP2R1AP30153 589 aa13.27□□□□□ -0.28
FOXN1-201ENST00000226247 PANK1Q8TE04 598 aa13.27□□□□□ -0.29
FOXN1-201ENST00000226247 TESK2Q96S53 571 aa13.27□□□□□ -0.29
FOXN1-201ENST00000226247 BECN1Q14457 450 aa13.25□□□□□ -0.29
FOXN1-201ENST00000226247 GPATCH8Q9UKJ3 1502 aaKnown RBP13.25□□□□□ -0.29
FOXN1-201ENST00000226247 SLFN5Q08AF3 891 aa13.24□□□□□ -0.29
FOXN1-201ENST00000226247 RIMBP3CA6NJZ7 1639 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 RIMBP3BA6NNM3 1639 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 RIMBP3Q9UFD9 1639 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 ZBTB7CA1YPR0 619 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 CCDC144AA2RUR9 1427 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 BCL2L13Q9BXK5 485 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 DMRT2Q9Y5R5 561 aa13.23□□□□□ -0.29
FOXN1-201ENST00000226247 CLUAP1Q96AJ1 413 aa13.22□□□□□ -0.29
FOXN1-201ENST00000226247 TNNT2P45379 298 aaPredicted RBP13.22□□□□□ -0.29
FOXN1-201ENST00000226247 RBM10P98175 930 aaKnown RBP13.22□□□□□ -0.29
FOXN1-201ENST00000226247 C9orf84Q5VXU9 1444 aa13.21□□□□□ -0.29
FOXN1-201ENST00000226247 AMER1Q5JTC6 1135 aaPredicted RBP13.21□□□□□ -0.29
FOXN1-201ENST00000226247 ABCA8O94911 1581 aa13.21□□□□□ -0.29
FOXN1-201ENST00000226247 BLMP54132 1417 aaPredicted RBP13.21□□□□□ -0.29
FOXN1-201ENST00000226247 USP19O94966 1318 aa13.21□□□□□ -0.3
FOXN1-201ENST00000226247 UPF2Q9HAU5 1272 aaKnown RBP13.2□□□□□ -0.3
FOXN1-201ENST00000226247 RRP7AQ9Y3A4 280 aaKnown RBP13.2□□□□□ -0.3
FOXN1-201ENST00000226247 CD109Q6YHK3 1445 aa13.19□□□□□ -0.3
FOXN1-201ENST00000226247 ERBINQ96RT1 1412 aa13.19□□□□□ -0.3
FOXN1-201ENST00000226247 KIF3BO15066 747 aa13.19□□□□□ -0.3
FOXN1-201ENST00000226247 ABCC2Q92887 1545 aa13.19□□□□□ -0.3
FOXN1-201ENST00000226247 CHGAP10645 457 aaKnown RBP13.19□□□□□ -0.3
FOXN1-201ENST00000226247 PRAG1Q86YV5 1406 aa13.18□□□□□ -0.3
FOXN1-201ENST00000226247 SPAG9O60271 1321 aaKnown RBP13.18□□□□□ -0.3
FOXN1-201ENST00000226247 ARHGAP5Q13017 1502 aa13.17□□□□□ -0.3
FOXN1-201ENST00000226247 ZMYM4Q5VZL5 1548 aa13.17□□□□□ -0.3
FOXN1-201ENST00000226247 GOLGA6L3A6NEY3 463 aa13.17□□□□□ -0.3
FOXN1-201ENST00000226247 L1TD1Q5T7N2 865 aaKnown RBP13.17□□□□□ -0.3
FOXN1-201ENST00000226247 TNNQ9UQP3 1299 aa13.17□□□□□ -0.3
FOXN1-201ENST00000226247 RRP9O43818 475 aaKnown RBP13.17□□□□□ -0.3
FOXN1-201ENST00000226247 SCAPERQ9BY12 1400 aa13.17□□□□□ -0.3
FOXN1-201ENST00000226247 XRCC6P12956 609 aaKnown RBP eCLIP13.16□□□□□ -0.3
FOXN1-201ENST00000226247 TBC1D2Q9BYX2 928 aa13.16□□□□□ -0.3
FOXN1-201ENST00000226247 CENPJQ9HC77 1338 aaPredicted RBP13.16□□□□□ -0.3
FOXN1-201ENST00000226247 TRIM44Q96DX7 344 aaPredicted RBP13.16□□□□□ -0.3
FOXN1-201ENST00000226247 ARHGEF12Q9NZN5 1544 aa13.15□□□□□ -0.3
FOXN1-201ENST00000226247 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
FOXN1-201ENST00000226247 SHROOM2Q13796 1616 aa13.15□□□□□ -0.3
FOXN1-201ENST00000226247 ADCY10Q96PN6 1610 aa13.14□□□□□ -0.31
FOXN1-201ENST00000226247 E9PSI1 815 aa13.14□□□□□ -0.31
FOXN1-201ENST00000226247 MFAP1P55081 439 aaKnown RBP13.13□□□□□ -0.31
FOXN1-201ENST00000226247 ADGRL2O95490 1459 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 PRDM10Q9NQV6 1147 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 CGNL1Q0VF96 1302 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 MAPK8IP3Q9UPT6 1336 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 TSPOAP1O95153 1857 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 NUTM2DQ5VT03 806 aaPredicted RBP13.13□□□□□ -0.31
FOXN1-201ENST00000226247 PDZRN3Q9UPQ7 1066 aa13.13□□□□□ -0.31
FOXN1-201ENST00000226247 COL17A1Q9UMD9 1497 aaPredicted RBP13.13□□□□□ -0.31
FOXN1-201ENST00000226247 WDR7Q9Y4E6 1490 aa13.12□□□□□ -0.31
FOXN1-201ENST00000226247 FAM13BQ9NYF5 915 aa13.12□□□□□ -0.31
FOXN1-201ENST00000226247 PLEKHH2Q8IVE3 1493 aa13.12□□□□□ -0.31
FOXN1-201ENST00000226247 RLBP1P12271 317 aa13.11□□□□□ -0.31
FOXN1-201ENST00000226247 ANTXR1Q9H6X2 564 aa13.11□□□□□ -0.31
FOXN1-201ENST00000226247 MAGI2Q86UL8 1455 aa13.11□□□□□ -0.31
FOXN1-201ENST00000226247 ZHX1Q9UKY1 873 aaPredicted RBP13.1□□□□□ -0.31
FOXN1-201ENST00000226247 MCM4P33991 863 aa13.1□□□□□ -0.31
FOXN1-201ENST00000226247 E9PCH4 1651 aa13.1□□□□□ -0.31
FOXN1-201ENST00000226247 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
FOXN1-201ENST00000226247 A2MP01023 1474 aa13.09□□□□□ -0.31
FOXN1-201ENST00000226247 EIF3AQ14152 1382 aaKnown RBP13.09□□□□□ -0.31
FOXN1-201ENST00000226247 TRAK2O60296 914 aa13.09□□□□□ -0.31
FOXN1-201ENST00000226247 PDE3AQ14432 1141 aa13.09□□□□□ -0.31
FOXN1-201ENST00000226247 TRMT2AQ8IZ69 625 aaKnown RBP13.09□□□□□ -0.31
FOXN1-201ENST00000226247 ESF1Q9H501 851 aaKnown RBP13.09□□□□□ -0.31
FOXN1-201ENST00000226247 WWC1Q8IX03 1113 aa13.09□□□□□ -0.31
FOXN1-201ENST00000226247 ADGBQ8N7X0 1667 aa13.09□□□□□ -0.31
FOXN1-201ENST00000226247 MYH16Q9H6N6 1097 aa13.09□□□□□ -0.31
FOXN1-201ENST00000226247 TRAPPC8Q9Y2L5 1435 aa13.08□□□□□ -0.32
FOXN1-201ENST00000226247 TBC1D32Q96NH3 1257 aa13.08□□□□□ -0.32
FOXN1-201ENST00000226247 CDCA8Q53HL2 280 aa13.08□□□□□ -0.32
FOXN1-201ENST00000226247 FANCAO15360 1455 aa13.08□□□□□ -0.32
FOXN1-201ENST00000226247 ZCCHC11Q5TAX3 1644 aaKnown RBP13.07□□□□□ -0.32
FOXN1-201ENST00000226247 KDM5DQ9BY66 1539 aa13.07□□□□□ -0.32
FOXN1-201ENST00000226247 CEBPAP49715 358 aaPredicted RBP13.07□□□□□ -0.32
FOXN1-201ENST00000226247 FOXD4L1Q9NU39 408 aa13.07□□□□□ -0.32
FOXN1-201ENST00000226247 FAM135AQ9P2D6 1515 aa13.07□□□□□ -0.32
FOXN1-201ENST00000226247 PMFBP1Q8TBY8 1022 aa13.07□□□□□ -0.32
FOXN1-201ENST00000226247 ABCC10Q5T3U5 1492 aa13.06□□□□□ -0.32
FOXN1-201ENST00000226247 GPRASP1Q5JY77 1395 aa13.06□□□□□ -0.32
FOXN1-201ENST00000226247 PLA2R1Q13018 1463 aa13.06□□□□□ -0.32
FOXN1-201ENST00000226247 C22orf23Q9BZE7 217 aa13.06□□□□□ -0.32
FOXN1-201ENST00000226247 INSRP06213 1382 aa13.05□□□□□ -0.32
FOXN1-201ENST00000226247 ESPNB1AK53 854 aa13.05□□□□□ -0.32
FOXN1-201ENST00000226247 CLCN1P35523 988 aa13.05□□□□□ -0.32
FOXN1-201ENST00000226247 RARSP54136 660 aaKnown RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms