RNA–Protein interactions for RNA: ENST00000221930.5

TGFB1-201, Transcript of transforming growth factor beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TGFB1, Length 2,769 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-201ENST00000221930 DEKP35659 375 aaKnown RBP20.45■□□□□ 0.86
TGFB1-201ENST00000221930 KANK1Q14678 1352 aa20.44■□□□□ 0.86
TGFB1-201ENST00000221930 COL17A1Q9UMD9 1497 aaPredicted RBP20.42■□□□□ 0.86
TGFB1-201ENST00000221930 AFAP1Q8N556 730 aa20.4■□□□□ 0.86
TGFB1-201ENST00000221930 EIF5BO60841 1220 aaKnown RBP20.4■□□□□ 0.86
TGFB1-201ENST00000221930 TMF1P82094 1093 aa20.4■□□□□ 0.86
TGFB1-201ENST00000221930 CDCA7LQ96GN5 454 aa20.39■□□□□ 0.85
TGFB1-201ENST00000221930 EFCAB6Q5THR3 1501 aa20.38■□□□□ 0.85
TGFB1-201ENST00000221930 RCAN3Q9UKA8 241 aa20.38■□□□□ 0.85
TGFB1-201ENST00000221930 KIAA1210Q9ULL0 1709 aa20.38■□□□□ 0.85
TGFB1-201ENST00000221930 RRP1P56182 461 aaKnown RBP20.37■□□□□ 0.85
TGFB1-201ENST00000221930 RIMBP3CA6NJZ7 1639 aa20.36■□□□□ 0.85
TGFB1-201ENST00000221930 RIMBP3BA6NNM3 1639 aa20.36■□□□□ 0.85
TGFB1-201ENST00000221930 RIMBP3Q9UFD9 1639 aa20.36■□□□□ 0.85
TGFB1-201ENST00000221930 EXOC6Q8TAG9 804 aa20.35■□□□□ 0.85
TGFB1-201ENST00000221930 RICTORQ6R327 1708 aa20.35■□□□□ 0.85
TGFB1-201ENST00000221930 WASHC2CQ9Y4E1 1318 aa20.33■□□□□ 0.84
TGFB1-201ENST00000221930 CLTCL1P53675 1640 aa20.33■□□□□ 0.84
TGFB1-201ENST00000221930 ZC3H13Q5T200 1668 aaKnown RBP20.32■□□□□ 0.84
TGFB1-201ENST00000221930 FRMPD1Q5SYB0 1578 aa20.32■□□□□ 0.84
TGFB1-201ENST00000221930 MADDQ8WXG6 1647 aa20.31■□□□□ 0.84
TGFB1-201ENST00000221930 ABCA6Q8N139 1617 aa20.31■□□□□ 0.84
TGFB1-201ENST00000221930 KIF1BO60333 1816 aa20.3■□□□□ 0.84
TGFB1-201ENST00000221930 PDE3BQ13370 1112 aa20.3■□□□□ 0.84
TGFB1-201ENST00000221930 ZMYM4Q5VZL5 1548 aa20.3■□□□□ 0.84
TGFB1-201ENST00000221930 PPRC1Q5VV67 1664 aaKnown RBP20.29■□□□□ 0.84
TGFB1-201ENST00000221930 PLIN1O60240 522 aa20.29■□□□□ 0.84
TGFB1-201ENST00000221930 IFT172Q9UG01 1749 aa20.28■□□□□ 0.84
TGFB1-201ENST00000221930 MYOM2P54296 1465 aa20.27■□□□□ 0.83
TGFB1-201ENST00000221930 ADAMTS8Q9UP79 889 aa20.27■□□□□ 0.83
TGFB1-201ENST00000221930 KNSTRNQ9Y448 316 aa20.26■□□□□ 0.83
TGFB1-201ENST00000221930 IQGAP1P46940 1657 aa20.26■□□□□ 0.83
TGFB1-201ENST00000221930 DIP2BQ9P265 1576 aa20.26■□□□□ 0.83
TGFB1-201ENST00000221930 DIP2CQ9Y2E4 1556 aa20.26■□□□□ 0.83
TGFB1-201ENST00000221930 REREQ9P2R6 1566 aa20.25■□□□□ 0.83
TGFB1-201ENST00000221930 PAK3O75914 559 aaPredicted RBP20.24■□□□□ 0.83
TGFB1-201ENST00000221930 BLMP54132 1417 aaPredicted RBP20.23■□□□□ 0.83
TGFB1-201ENST00000221930 KIF3BO15066 747 aa20.23■□□□□ 0.83
TGFB1-201ENST00000221930 NOP58Q9Y2X3 529 aaKnown RBP20.22■□□□□ 0.83
TGFB1-201ENST00000221930 PPP2R1AP30153 589 aa20.21■□□□□ 0.83
TGFB1-201ENST00000221930 AMER1Q5JTC6 1135 aaPredicted RBP20.2■□□□□ 0.82
TGFB1-201ENST00000221930 CAMSAP1Q5T5Y3 1602 aa20.2■□□□□ 0.82
TGFB1-201ENST00000221930 ABCC3O15438 1527 aa20.19■□□□□ 0.82
TGFB1-201ENST00000221930 ADGRB3O60242 1522 aa20.19■□□□□ 0.82
TGFB1-201ENST00000221930 ARHGAP31Q2M1Z3 1444 aa20.18■□□□□ 0.82
TGFB1-201ENST00000221930 ANP32AP39687 249 aaKnown RBP20.18■□□□□ 0.82
TGFB1-201ENST00000221930 DAXXQ9UER7 740 aaPredicted RBP20.18■□□□□ 0.82
TGFB1-201ENST00000221930 SCAF11Q99590 1463 aaKnown RBP20.18■□□□□ 0.82
TGFB1-201ENST00000221930 NRXN1Q9ULB1 1477 aa20.18■□□□□ 0.82
TGFB1-201ENST00000221930 WDR43Q15061 677 aaKnown RBP eCLIP20.17■□□□□ 0.82
TGFB1-201ENST00000221930 PIK3C2BO00750 1634 aa20.16■□□□□ 0.82
TGFB1-201ENST00000221930 CDCA8Q53HL2 280 aa20.16■□□□□ 0.82
TGFB1-201ENST00000221930 CFAP70Q5T0N1 1121 aa20.16■□□□□ 0.82
TGFB1-201ENST00000221930 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
TGFB1-201ENST00000221930 SKAP1Q86WV1 359 aa20.14■□□□□ 0.82
TGFB1-201ENST00000221930 IPO9Q96P70 1041 aaKnown RBP20.14■□□□□ 0.82
TGFB1-201ENST00000221930 SETBP1Q9Y6X0 1596 aa20.14■□□□□ 0.81
TGFB1-201ENST00000221930 INSRP06213 1382 aa20.14■□□□□ 0.81
TGFB1-201ENST00000221930 C20orf194Q5TEA3 1177 aa20.14■□□□□ 0.81
TGFB1-201ENST00000221930 PLEKHH1Q9ULM0 1364 aa20.13■□□□□ 0.81
TGFB1-201ENST00000221930 NBR1Q14596 966 aa20.13■□□□□ 0.81
TGFB1-201ENST00000221930 UGGT1Q9NYU2 1555 aa20.13■□□□□ 0.81
TGFB1-201ENST00000221930 NPM2Q86SE8 214 aaKnown RBP20.13■□□□□ 0.81
TGFB1-201ENST00000221930 PPLO60437 1756 aa20.12■□□□□ 0.81
TGFB1-201ENST00000221930 AGLP35573 1532 aa20.12■□□□□ 0.81
TGFB1-201ENST00000221930 MROH2AA6NES4 1674 aa20.12■□□□□ 0.81
TGFB1-201ENST00000221930 PKNOX2Q96KN3 472 aa20.12■□□□□ 0.81
TGFB1-201ENST00000221930 ADGRF5Q8IZF2 1346 aa20.12■□□□□ 0.81
TGFB1-201ENST00000221930 MYO3AQ8NEV4 1616 aa20.11■□□□□ 0.81
TGFB1-201ENST00000221930 NOS1P29475 1434 aa20.11■□□□□ 0.81
TGFB1-201ENST00000221930 CCDC146Q8IYE0 955 aa20.11■□□□□ 0.81
TGFB1-201ENST00000221930 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
TGFB1-201ENST00000221930 NPATQ14207 1427 aa20.1■□□□□ 0.81
TGFB1-201ENST00000221930 EIF3AQ14152 1382 aaKnown RBP20.09■□□□□ 0.81
TGFB1-201ENST00000221930 PDE4AP27815 886 aa20.09■□□□□ 0.81
TGFB1-201ENST00000221930 DUSP27Q5VZP5 1158 aa20.08■□□□□ 0.81
TGFB1-201ENST00000221930 ASXL1Q8IXJ9 1541 aa20.08■□□□□ 0.81
TGFB1-201ENST00000221930 SYNMO15061 1565 aa20.08■□□□□ 0.81
TGFB1-201ENST00000221930 ZBTB47Q9UFB7 747 aaPredicted RBP20.08■□□□□ 0.8
TGFB1-201ENST00000221930 RPGRIP1LQ68CZ1 1315 aa20.08■□□□□ 0.8
TGFB1-201ENST00000221930 PPP6R1Q9UPN7 881 aa20.06■□□□□ 0.8
TGFB1-201ENST00000221930 CHGAP10645 457 aaKnown RBP20.06■□□□□ 0.8
TGFB1-201ENST00000221930 GOLGA2Q08379 1002 aa20.06■□□□□ 0.8
TGFB1-201ENST00000221930 MYOM1P52179 1685 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 SIGLEC1Q9BZZ2 1709 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 CYB5RLQ6IPT4 315 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 CARD14Q9BXL6 1004 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 BACH2Q9BYV9 841 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 DNAJC5Q9H3Z4 198 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 ZNF521Q96K83 1311 aa20.04■□□□□ 0.8
TGFB1-201ENST00000221930 KIF13AQ9H1H9 1805 aa20.03■□□□□ 0.8
TGFB1-201ENST00000221930 APAF1O14727 1248 aa20.02■□□□□ 0.8
TGFB1-201ENST00000221930 PIK3C2GO75747 1445 aa20.02■□□□□ 0.79
TGFB1-201ENST00000221930 SPINK5Q9NQ38 1064 aaPredicted RBP20.01■□□□□ 0.79
TGFB1-201ENST00000221930 SBNO2Q9Y2G9 1366 aa20.01■□□□□ 0.79
TGFB1-201ENST00000221930 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.01■□□□□ 0.79
TGFB1-201ENST00000221930 ERVK-7P63135 1459 aa20.01■□□□□ 0.79
TGFB1-201ENST00000221930 PREX1Q8TCU6 1659 aa20.01■□□□□ 0.79
TGFB1-201ENST00000221930 KDM5AP29375 1690 aaKnown RBP20■□□□□ 0.79
TGFB1-201ENST00000221930 MS4A1P11836 297 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms