RNA–Protein interactions for RNA: ENST00000218652.11

NDFIP2-201, Transcript of Nedd4 family interacting protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDFIP2, Length 4,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP2-201ENST00000218652 VPS37CA5D8V6 355 aaPredicted RBP18.32■□□□□ 0.52
NDFIP2-201ENST00000218652 TPM1P09493 284 aa18.31■□□□□ 0.52
NDFIP2-201ENST00000218652 HOMER1Q86YM7 354 aa18.31■□□□□ 0.52
NDFIP2-201ENST00000218652 C9orf78Q9NZ63 289 aaPredicted RBP18.31■□□□□ 0.52
NDFIP2-201ENST00000218652 BAZ1AQ9NRL2 1556 aaPredicted RBP18.31■□□□□ 0.52
NDFIP2-201ENST00000218652 NFKBIBQ15653 356 aa18.3■□□□□ 0.52
NDFIP2-201ENST00000218652 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
NDFIP2-201ENST00000218652 FHOD3Q2V2M9 1422 aa18.29■□□□□ 0.52
NDFIP2-201ENST00000218652 CPLX1O14810 134 aa18.29■□□□□ 0.52
NDFIP2-201ENST00000218652 RUFY2Q8WXA3 655 aa18.29■□□□□ 0.52
NDFIP2-201ENST00000218652 COG3Q96JB2 828 aa18.29■□□□□ 0.52
NDFIP2-201ENST00000218652 RSPH4AQ5TD94 716 aa18.29■□□□□ 0.52
NDFIP2-201ENST00000218652 GPS2Q13227 327 aa18.28■□□□□ 0.52
NDFIP2-201ENST00000218652 USP47Q96K76 1375 aa18.28■□□□□ 0.52
NDFIP2-201ENST00000218652 IPO7O95373 1038 aaKnown RBP18.28■□□□□ 0.52
NDFIP2-201ENST00000218652 RIPK4P57078 832 aa18.28■□□□□ 0.52
NDFIP2-201ENST00000218652 SYNE3Q6ZMZ3 975 aa18.27■□□□□ 0.52
NDFIP2-201ENST00000218652 FBXW7Q969H0 707 aa18.27■□□□□ 0.52
NDFIP2-201ENST00000218652 BCL11BQ9C0K0 894 aaPredicted RBP18.27■□□□□ 0.52
NDFIP2-201ENST00000218652 MINK1Q8N4C8 1332 aaPredicted RBP18.27■□□□□ 0.52
NDFIP2-201ENST00000218652 CHMP4CQ96CF2 233 aa18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 PATL2C9JE40 543 aaKnown RBP18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 C22orf23Q9BZE7 217 aa18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 CCDC144AA2RUR9 1427 aa18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 APPP05067 770 aa18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 NEXNQ0ZGT2 675 aa18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 FKBP5Q13451 457 aaPredicted RBP18.26■□□□□ 0.51
NDFIP2-201ENST00000218652 RNF214Q8ND24 703 aa18.25■□□□□ 0.51
NDFIP2-201ENST00000218652 IFIT2P09913 472 aaKnown RBP18.25■□□□□ 0.51
NDFIP2-201ENST00000218652 API5Q9BZZ5 524 aaKnown RBP18.25■□□□□ 0.51
NDFIP2-201ENST00000218652 PCMTD1Q96MG8 357 aaPredicted RBP18.24■□□□□ 0.51
NDFIP2-201ENST00000218652 PANK1Q8TE04 598 aa18.24■□□□□ 0.51
NDFIP2-201ENST00000218652 NUCB2P80303 420 aa18.24■□□□□ 0.51
NDFIP2-201ENST00000218652 SMC3Q9UQE7 1217 aa18.24■□□□□ 0.51
NDFIP2-201ENST00000218652 DIAPH1O60610 1272 aaKnown RBP18.23■□□□□ 0.51
NDFIP2-201ENST00000218652 C1orf141Q5JVX7 400 aa18.23■□□□□ 0.51
NDFIP2-201ENST00000218652 TRIM29Q14134 588 aa18.22■□□□□ 0.51
NDFIP2-201ENST00000218652 CCDC70Q6NSX1 233 aa18.22■□□□□ 0.51
NDFIP2-201ENST00000218652 IFT57Q9NWB7 429 aa18.22■□□□□ 0.51
NDFIP2-201ENST00000218652 EVC2Q86UK5 1308 aa18.22■□□□□ 0.51
NDFIP2-201ENST00000218652 SETQ01105 290 aaPredicted RBP18.22■□□□□ 0.51
NDFIP2-201ENST00000218652 MSH5O43196 834 aa18.21■□□□□ 0.51
NDFIP2-201ENST00000218652 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.21■□□□□ 0.51
NDFIP2-201ENST00000218652 FOSBP53539 338 aa18.21■□□□□ 0.51
NDFIP2-201ENST00000218652 RAD21O60216 631 aa18.21■□□□□ 0.5
NDFIP2-201ENST00000218652 VGFO15240 615 aaPredicted RBP18.2■□□□□ 0.5
NDFIP2-201ENST00000218652 R3HCC1Q9Y3T6 440 aaKnown RBP18.2■□□□□ 0.5
NDFIP2-201ENST00000218652 TPM2P07951 284 aa18.19■□□□□ 0.5
NDFIP2-201ENST00000218652 RNF20Q5VTR2 975 aa18.19■□□□□ 0.5
NDFIP2-201ENST00000218652 SASS6Q6UVJ0 657 aa18.19■□□□□ 0.5
NDFIP2-201ENST00000218652 LRRFIP1Q32MZ4 808 aaKnown RBP18.19■□□□□ 0.5
NDFIP2-201ENST00000218652 INTS3Q68E01 1043 aaKnown RBP18.19■□□□□ 0.5
NDFIP2-201ENST00000218652 TRDNQ13061 729 aa18.19■□□□□ 0.5
NDFIP2-201ENST00000218652 ANKRD20A12PQ8NF67 263 aa18.18■□□□□ 0.5
NDFIP2-201ENST00000218652 G3BP1Q13283 466 aaKnown RBP eCLIP18.18■□□□□ 0.5
NDFIP2-201ENST00000218652 JPH4Q96JJ6 628 aa18.18■□□□□ 0.5
NDFIP2-201ENST00000218652 NASPP49321 788 aaPredicted RBP18.17■□□□□ 0.5
NDFIP2-201ENST00000218652 CCDC73Q6ZRK6 1079 aa18.17■□□□□ 0.5
NDFIP2-201ENST00000218652 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
NDFIP2-201ENST00000218652 MRE11P49959 708 aa18.16■□□□□ 0.5
NDFIP2-201ENST00000218652 HMOX1P09601 288 aa18.16■□□□□ 0.5
NDFIP2-201ENST00000218652 TEX35Q5T0J7 233 aa18.16■□□□□ 0.5
NDFIP2-201ENST00000218652 BRPF3Q9ULD4 1205 aa18.16■□□□□ 0.5
NDFIP2-201ENST00000218652 DHX16O60231 1041 aaKnown RBP18.16■□□□□ 0.5
NDFIP2-201ENST00000218652 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
NDFIP2-201ENST00000218652 MNS1Q8NEH6 495 aa18.15■□□□□ 0.5
NDFIP2-201ENST00000218652 RUNDC1Q96C34 613 aa18.15■□□□□ 0.5
NDFIP2-201ENST00000218652 SDF4Q9BRK5 362 aa18.15■□□□□ 0.5
NDFIP2-201ENST00000218652 KIF7Q2M1P5 1343 aa18.14■□□□□ 0.5
NDFIP2-201ENST00000218652 TRAK2O60296 914 aa18.14■□□□□ 0.49
NDFIP2-201ENST00000218652 NACADO15069 1562 aa18.14■□□□□ 0.49
NDFIP2-201ENST00000218652 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.14■□□□□ 0.49
NDFIP2-201ENST00000218652 NFXL1Q6ZNB6 911 aa18.13■□□□□ 0.49
NDFIP2-201ENST00000218652 RAPGEF2Q9Y4G8 1499 aa18.13■□□□□ 0.49
NDFIP2-201ENST00000218652 CCDC18Q5T9S5 1454 aa18.12■□□□□ 0.49
NDFIP2-201ENST00000218652 ADAMTS8Q9UP79 889 aa18.12■□□□□ 0.49
NDFIP2-201ENST00000218652 CAVIN1Q6NZI2 390 aaKnown RBP18.12■□□□□ 0.49
NDFIP2-201ENST00000218652 CCDC47Q96A33 483 aaKnown RBP18.12■□□□□ 0.49
NDFIP2-201ENST00000218652 GGNBP2Q9H3C7 697 aa18.12■□□□□ 0.49
NDFIP2-201ENST00000218652 FBXO3Q9UK99 471 aa18.11■□□□□ 0.49
NDFIP2-201ENST00000218652 DDX58O95786 925 aaKnown RBP18.11■□□□□ 0.49
NDFIP2-201ENST00000218652 TSPYL4Q9UJ04 414 aa18.11■□□□□ 0.49
NDFIP2-201ENST00000218652 HOOK1Q9UJC3 728 aaKnown RBP18.11■□□□□ 0.49
NDFIP2-201ENST00000218652 GNAI1P63096 354 aa18.1■□□□□ 0.49
NDFIP2-201ENST00000218652 NEUROD6Q96NK8 337 aa18.1■□□□□ 0.49
NDFIP2-201ENST00000218652 MROH2BQ7Z745 1585 aa18.1■□□□□ 0.49
NDFIP2-201ENST00000218652 NEK4P51957 841 aa18.09■□□□□ 0.49
NDFIP2-201ENST00000218652 IL27Q8NEV9 243 aa18.09■□□□□ 0.49
NDFIP2-201ENST00000218652 ARGLU1Q9NWB6 273 aaPredicted RBP18.09■□□□□ 0.49
NDFIP2-201ENST00000218652 CDC45O75419 566 aa18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 NAP1L1P55209 391 aaKnown RBP18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 HSP90B2PQ58FF3 399 aa18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 RALYLQ86SE5 291 aaKnown RBP18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 FMNL2Q96PY5 1086 aa18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 CCDC7Q96M83 1385 aa18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 VPS37DQ86XT2 251 aa18.08■□□□□ 0.49
NDFIP2-201ENST00000218652 EVA1CP58658 441 aa18.08■□□□□ 0.48
NDFIP2-201ENST00000218652 SAFBQ15424 915 aaKnown RBP eCLIP18.08■□□□□ 0.48
NDFIP2-201ENST00000218652 CCDC27Q2M243 656 aa18.08■□□□□ 0.48
NDFIP2-201ENST00000218652 SYTL4Q96C24 671 aaPredicted RBP18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 807.5 ms