RNA–Protein interactions for RNA: ENST00000216962.8

PYGB-201, Transcript of glycogen phosphorylase B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PYGB, Length 4,134 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PYGB-201ENST00000216962 HSP90AB1P08238 724 aaKnown RBP12.66□□□□□ -0.38
PYGB-201ENST00000216962 CLUAP1Q96AJ1 413 aa12.66□□□□□ -0.38
PYGB-201ENST00000216962 ARHGEF11O15085 1522 aa12.66□□□□□ -0.38
PYGB-201ENST00000216962 PARD3Q8TEW0 1356 aa12.66□□□□□ -0.38
PYGB-201ENST00000216962 ARHGEF12Q9NZN5 1544 aa12.65□□□□□ -0.38
PYGB-201ENST00000216962 GPATCH8Q9UKJ3 1502 aaKnown RBP12.65□□□□□ -0.38
PYGB-201ENST00000216962 PDE3AQ14432 1141 aa12.65□□□□□ -0.38
PYGB-201ENST00000216962 OS9Q13438 667 aaPredicted RBP12.65□□□□□ -0.38
PYGB-201ENST00000216962 UHRF1BP1Q6BDS2 1440 aa12.65□□□□□ -0.38
PYGB-201ENST00000216962 NPHP1O15259 732 aa12.64□□□□□ -0.39
PYGB-201ENST00000216962 KIF14Q15058 1648 aa12.64□□□□□ -0.39
PYGB-201ENST00000216962 NUP153P49790 1475 aaKnown RBP12.64□□□□□ -0.39
PYGB-201ENST00000216962 KDM5BQ9UGL1 1544 aa12.64□□□□□ -0.39
PYGB-201ENST00000216962 GZF1Q9H116 711 aaPredicted RBP12.64□□□□□ -0.39
PYGB-201ENST00000216962 ABCA5Q8WWZ7 1642 aa12.64□□□□□ -0.39
PYGB-201ENST00000216962 ITSN2Q9NZM3 1697 aa12.63□□□□□ -0.39
PYGB-201ENST00000216962 PTMAP06454 111 aaKnown RBP12.63□□□□□ -0.39
PYGB-201ENST00000216962 ZNF330Q9Y3S2 320 aaPredicted RBP12.63□□□□□ -0.39
PYGB-201ENST00000216962 C20orf194Q5TEA3 1177 aa12.63□□□□□ -0.39
PYGB-201ENST00000216962 SPAG9O60271 1321 aaKnown RBP12.63□□□□□ -0.39
PYGB-201ENST00000216962 KDM6BO15054 1643 aa12.63□□□□□ -0.39
PYGB-201ENST00000216962 FGD1P98174 961 aa12.63□□□□□ -0.39
PYGB-201ENST00000216962 SYNJ2O15056 1496 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 U2AF1L5P0DN76 240 aaPredicted RBP12.62□□□□□ -0.39
PYGB-201ENST00000216962 PTMSP20962 102 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 U2AF1Q01081 240 aaKnown RBP eCLIP12.62□□□□□ -0.39
PYGB-201ENST00000216962 GBP4Q96PP9 640 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 NINLQ9Y2I6 1382 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 RAPGEF6Q8TEU7 1601 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 IPO8O15397 1037 aaKnown RBP12.62□□□□□ -0.39
PYGB-201ENST00000216962 KCNJ4P48050 445 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 MFAP1P55081 439 aaKnown RBP12.62□□□□□ -0.39
PYGB-201ENST00000216962 PLB1Q6P1J6 1458 aa12.62□□□□□ -0.39
PYGB-201ENST00000216962 SLFN5Q08AF3 891 aa12.61□□□□□ -0.39
PYGB-201ENST00000216962 SKAP1Q86WV1 359 aa12.61□□□□□ -0.39
PYGB-201ENST00000216962 DNTTIP2Q5QJE6 756 aaKnown RBP12.61□□□□□ -0.39
PYGB-201ENST00000216962 OSCARQ8IYS5 282 aa12.61□□□□□ -0.39
PYGB-201ENST00000216962 FAM43AQ8N2R8 423 aa12.61□□□□□ -0.39
PYGB-201ENST00000216962 CCDC141Q6ZP82 1450 aa12.6□□□□□ -0.39
PYGB-201ENST00000216962 MAGI1Q96QZ7 1491 aaPredicted RBP12.6□□□□□ -0.39
PYGB-201ENST00000216962 DUSP27Q5VZP5 1158 aa12.6□□□□□ -0.39
PYGB-201ENST00000216962 SMC4Q9NTJ3 1288 aa12.6□□□□□ -0.39
PYGB-201ENST00000216962 DDX11L8A8MPP1 907 aa12.6□□□□□ -0.39
PYGB-201ENST00000216962 ITPRIPQ8IWB1 547 aa12.6□□□□□ -0.39
PYGB-201ENST00000216962 PANK1Q8TE04 598 aa12.59□□□□□ -0.39
PYGB-201ENST00000216962 ADGRL2O95490 1459 aa12.59□□□□□ -0.39
PYGB-201ENST00000216962 GRIN2AQ12879 1464 aa12.59□□□□□ -0.39
PYGB-201ENST00000216962 RRP7AQ9Y3A4 280 aaKnown RBP12.59□□□□□ -0.39
PYGB-201ENST00000216962 BCAR3O75815 825 aa12.59□□□□□ -0.39
PYGB-201ENST00000216962 ZKSCAN2Q63HK3 967 aa12.59□□□□□ -0.39
PYGB-201ENST00000216962 CHMP5Q9NZZ3 219 aa12.58□□□□□ -0.4
PYGB-201ENST00000216962 RUNDC1Q96C34 613 aa12.58□□□□□ -0.4
PYGB-201ENST00000216962 INSRP06213 1382 aa12.58□□□□□ -0.4
PYGB-201ENST00000216962 BCL2L13Q9BXK5 485 aa12.58□□□□□ -0.4
PYGB-201ENST00000216962 SCAPERQ9BY12 1400 aa12.58□□□□□ -0.4
PYGB-201ENST00000216962 KIF3BO15066 747 aa12.57□□□□□ -0.4
PYGB-201ENST00000216962 DENND4BO75064 1496 aaPredicted RBP12.57□□□□□ -0.4
PYGB-201ENST00000216962 CFAP44Q96MT7 982 aa12.57□□□□□ -0.4
PYGB-201ENST00000216962 PRAG1Q86YV5 1406 aa12.57□□□□□ -0.4
PYGB-201ENST00000216962 ADAMTS12P58397 1594 aa12.57□□□□□ -0.4
PYGB-201ENST00000216962 ARHGAP5Q13017 1502 aa12.57□□□□□ -0.4
PYGB-201ENST00000216962 DISP3Q9P2K9 1392 aa12.57□□□□□ -0.4
PYGB-201ENST00000216962 PER1O15534 1290 aaPredicted RBP12.56□□□□□ -0.4
PYGB-201ENST00000216962 ZRSR1Q15695 479 aaKnown RBP12.56□□□□□ -0.4
PYGB-201ENST00000216962 KIAA0556O60303 1618 aa12.56□□□□□ -0.4
PYGB-201ENST00000216962 CASC1Q6TDU7 716 aa12.55□□□□□ -0.4
PYGB-201ENST00000216962 NKTRP30414 1462 aaKnown RBP12.55□□□□□ -0.4
PYGB-201ENST00000216962 SHANK2Q9UPX8 1470 aa12.55□□□□□ -0.4
PYGB-201ENST00000216962 CDK11BP21127 795 aaKnown RBP12.55□□□□□ -0.4
PYGB-201ENST00000216962 ELL2O00472 640 aaPredicted RBP12.55□□□□□ -0.4
PYGB-201ENST00000216962 KDM5CP41229 1560 aa12.54□□□□□ -0.4
PYGB-201ENST00000216962 DZIP1LQ8IYY4 767 aaKnown RBP12.54□□□□□ -0.4
PYGB-201ENST00000216962 DDX19BQ9UMR2 479 aa12.53□□□□□ -0.4
PYGB-201ENST00000216962 C22orf23Q9BZE7 217 aa12.53□□□□□ -0.4
PYGB-201ENST00000216962 C8orf34Q49A92 452 aa12.52□□□□□ -0.4
PYGB-201ENST00000216962 LTV1Q96GA3 475 aaPredicted RBP12.52□□□□□ -0.4
PYGB-201ENST00000216962 TESK2Q96S53 571 aa12.52□□□□□ -0.4
PYGB-201ENST00000216962 PDZRN3Q9UPQ7 1066 aa12.52□□□□□ -0.4
PYGB-201ENST00000216962 TCP11L2Q8N4U5 519 aa12.52□□□□□ -0.41
PYGB-201ENST00000216962 TRAK1Q9UPV9 953 aa12.52□□□□□ -0.41
PYGB-201ENST00000216962 MBD5Q9P267 1494 aa12.52□□□□□ -0.41
PYGB-201ENST00000216962 NUP160Q12769 1436 aa12.52□□□□□ -0.41
PYGB-201ENST00000216962 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
PYGB-201ENST00000216962 SKOR2Q2VWA4 1001 aaPredicted RBP12.52□□□□□ -0.41
PYGB-201ENST00000216962 COL17A1Q9UMD9 1497 aaPredicted RBP12.51□□□□□ -0.41
PYGB-201ENST00000216962 MRE11P49959 708 aa12.51□□□□□ -0.41
PYGB-201ENST00000216962 ADGBQ8N7X0 1667 aa12.51□□□□□ -0.41
PYGB-201ENST00000216962 BLMP54132 1417 aaPredicted RBP12.5□□□□□ -0.41
PYGB-201ENST00000216962 ZNF608Q9ULD9 1512 aaPredicted RBP12.5□□□□□ -0.41
PYGB-201ENST00000216962 CALD1Q05682 793 aaKnown RBP12.5□□□□□ -0.41
PYGB-201ENST00000216962 KDM2BQ8NHM5 1336 aa12.5□□□□□ -0.41
PYGB-201ENST00000216962 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.5□□□□□ -0.41
PYGB-201ENST00000216962 DISP1Q96F81 1524 aa12.49□□□□□ -0.41
PYGB-201ENST00000216962 WDR63Q8IWG1 891 aa12.49□□□□□ -0.41
PYGB-201ENST00000216962 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
PYGB-201ENST00000216962 FAM135AQ9P2D6 1515 aa12.49□□□□□ -0.41
PYGB-201ENST00000216962 ZMYM4Q5VZL5 1548 aa12.49□□□□□ -0.41
PYGB-201ENST00000216962 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
PYGB-201ENST00000216962 ISY1Q9ULR0 285 aaKnown RBP12.48□□□□□ -0.41
PYGB-201ENST00000216962 TRAK2O60296 914 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms