RNA–Protein interactions for RNA: ENST00000216879.8

NSFL1C-201, Transcript of NSFL1 cofactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NSFL1C, Length 3,568 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSFL1C-201ENST00000216879 C22orf23Q9BZE7 217 aa20.95■□□□□ 0.94
NSFL1C-201ENST00000216879 ERBB4Q15303 1308 aa20.95■□□□□ 0.94
NSFL1C-201ENST00000216879 LAMC3Q9Y6N6 1575 aa20.95■□□□□ 0.94
NSFL1C-201ENST00000216879 HSCBQ8IWL3 235 aa20.95■□□□□ 0.94
NSFL1C-201ENST00000216879 CHMP5Q9NZZ3 219 aa20.93■□□□□ 0.94
NSFL1C-201ENST00000216879 FTSJ3Q8IY81 847 aaKnown RBP20.93■□□□□ 0.94
NSFL1C-201ENST00000216879 C9orf84Q5VXU9 1444 aa20.92■□□□□ 0.94
NSFL1C-201ENST00000216879 NCLP19338 710 aaKnown RBP20.92■□□□□ 0.94
NSFL1C-201ENST00000216879 MRE11P49959 708 aa20.92■□□□□ 0.94
NSFL1C-201ENST00000216879 WDR62O43379 1518 aa20.92■□□□□ 0.94
NSFL1C-201ENST00000216879 AMER1Q5JTC6 1135 aaPredicted RBP20.92■□□□□ 0.94
NSFL1C-201ENST00000216879 HSP90AB1P08238 724 aaKnown RBP20.91■□□□□ 0.94
NSFL1C-201ENST00000216879 NUP153P49790 1475 aaKnown RBP20.91■□□□□ 0.94
NSFL1C-201ENST00000216879 RRP9O43818 475 aaKnown RBP20.91■□□□□ 0.94
NSFL1C-201ENST00000216879 EIF3AQ14152 1382 aaKnown RBP20.9■□□□□ 0.94
NSFL1C-201ENST00000216879 ZNF521Q96K83 1311 aa20.9■□□□□ 0.94
NSFL1C-201ENST00000216879 PRAG1Q86YV5 1406 aa20.9■□□□□ 0.94
NSFL1C-201ENST00000216879 IQGAP2Q13576 1575 aa20.9■□□□□ 0.94
NSFL1C-201ENST00000216879 GPATCH8Q9UKJ3 1502 aaKnown RBP20.89■□□□□ 0.94
NSFL1C-201ENST00000216879 NKTRP30414 1462 aaKnown RBP20.89■□□□□ 0.94
NSFL1C-201ENST00000216879 PMFBP1Q8TBY8 1022 aa20.89■□□□□ 0.94
NSFL1C-201ENST00000216879 PLB1Q6P1J6 1458 aa20.88■□□□□ 0.93
NSFL1C-201ENST00000216879 RWDD1Q9H446 243 aaPredicted RBP20.88■□□□□ 0.93
NSFL1C-201ENST00000216879 FSD2A1L4K1 749 aa20.87■□□□□ 0.93
NSFL1C-201ENST00000216879 TROQ12816 1431 aaPredicted RBP20.87■□□□□ 0.93
NSFL1C-201ENST00000216879 PDE3AQ14432 1141 aa20.87■□□□□ 0.93
NSFL1C-201ENST00000216879 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
NSFL1C-201ENST00000216879 GAS2L3Q86XJ1 694 aa20.86■□□□□ 0.93
NSFL1C-201ENST00000216879 PLEKHH2Q8IVE3 1493 aa20.85■□□□□ 0.93
NSFL1C-201ENST00000216879 CHMP7Q8WUX9 453 aaPredicted RBP20.85■□□□□ 0.93
NSFL1C-201ENST00000216879 FAM13BQ9NYF5 915 aa20.85■□□□□ 0.93
NSFL1C-201ENST00000216879 KIAA1211Q6ZU35 1233 aa20.85■□□□□ 0.93
NSFL1C-201ENST00000216879 ITPRIPQ8IWB1 547 aa20.85■□□□□ 0.93
NSFL1C-201ENST00000216879 COL17A1Q9UMD9 1497 aaPredicted RBP20.84■□□□□ 0.93
NSFL1C-201ENST00000216879 MAGI2Q86UL8 1455 aa20.83■□□□□ 0.93
NSFL1C-201ENST00000216879 RARSP54136 660 aaKnown RBP20.83■□□□□ 0.92
NSFL1C-201ENST00000216879 ZNF608Q9ULD9 1512 aaPredicted RBP20.82■□□□□ 0.92
NSFL1C-201ENST00000216879 TSR2Q969E8 191 aaKnown RBP20.81■□□□□ 0.92
NSFL1C-201ENST00000216879 TCP11L2Q8N4U5 519 aa20.81■□□□□ 0.92
NSFL1C-201ENST00000216879 LNPKQ9C0E8 428 aa20.81■□□□□ 0.92
NSFL1C-201ENST00000216879 ANP32BQ92688 251 aaKnown RBP20.8■□□□□ 0.92
NSFL1C-201ENST00000216879 TNPO1Q92973 898 aaKnown RBP20.8■□□□□ 0.92
NSFL1C-201ENST00000216879 DDX11L8A8MPP1 907 aa20.8■□□□□ 0.92
NSFL1C-201ENST00000216879 TPRNQ4KMQ1 711 aa20.78■□□□□ 0.92
NSFL1C-201ENST00000216879 TRMT2AQ8IZ69 625 aaKnown RBP20.78■□□□□ 0.92
NSFL1C-201ENST00000216879 ARHGEF12Q9NZN5 1544 aa20.78■□□□□ 0.92
NSFL1C-201ENST00000216879 MORC1Q86VD1 984 aa20.78■□□□□ 0.92
NSFL1C-201ENST00000216879 SMC4Q9NTJ3 1288 aa20.78■□□□□ 0.92
NSFL1C-201ENST00000216879 R3HCC1Q9Y3T6 440 aaKnown RBP20.77■□□□□ 0.92
NSFL1C-201ENST00000216879 CHGAP10645 457 aaKnown RBP20.76■□□□□ 0.91
NSFL1C-201ENST00000216879 MSNP26038 577 aaKnown RBP20.76■□□□□ 0.91
NSFL1C-201ENST00000216879 CDCA8Q53HL2 280 aa20.76■□□□□ 0.91
NSFL1C-201ENST00000216879 A2MP01023 1474 aa20.75■□□□□ 0.91
NSFL1C-201ENST00000216879 RBM42Q9BTD8 480 aaKnown RBP20.75■□□□□ 0.91
NSFL1C-201ENST00000216879 GBP4Q96PP9 640 aa20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 U2AF1L5P0DN76 240 aaPredicted RBP20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 U2AF1Q01081 240 aaKnown RBP eCLIP20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 DDX49Q9Y6V7 483 aaKnown RBP20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 NASPP49321 788 aaPredicted RBP20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 FOXD4L5Q5VV16 416 aaPredicted RBP20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 FOXD4L4Q8WXT5 416 aaPredicted RBP20.74■□□□□ 0.91
NSFL1C-201ENST00000216879 A0A0U1RQG5 324 aaPredicted RBP20.73■□□□□ 0.91
NSFL1C-201ENST00000216879 U2SURPO15042 1029 aaKnown RBP20.72■□□□□ 0.91
NSFL1C-201ENST00000216879 MPNDQ8N594 471 aa20.72■□□□□ 0.91
NSFL1C-201ENST00000216879 NLRP1Q9C000 1473 aa20.72■□□□□ 0.91
NSFL1C-201ENST00000216879 DZIP1LQ8IYY4 767 aaKnown RBP20.72■□□□□ 0.91
NSFL1C-201ENST00000216879 SSFA2P28290 1259 aa20.71■□□□□ 0.91
NSFL1C-201ENST00000216879 CARD14Q9BXL6 1004 aa20.71■□□□□ 0.91
NSFL1C-201ENST00000216879 E9PCH4 1651 aa20.71■□□□□ 0.91
NSFL1C-201ENST00000216879 ZKSCAN2Q63HK3 967 aa20.7■□□□□ 0.9
NSFL1C-201ENST00000216879 PRDM10Q9NQV6 1147 aa20.7■□□□□ 0.9
NSFL1C-201ENST00000216879 CFAP70Q5T0N1 1121 aa20.7■□□□□ 0.9
NSFL1C-201ENST00000216879 MVPQ14764 893 aaKnown RBP20.69■□□□□ 0.9
NSFL1C-201ENST00000216879 XPCQ01831 940 aaPredicted RBP20.69■□□□□ 0.9
NSFL1C-201ENST00000216879 JPH4Q96JJ6 628 aa20.69■□□□□ 0.9
NSFL1C-201ENST00000216879 C1orf115Q9H7X2 142 aa20.69■□□□□ 0.9
NSFL1C-201ENST00000216879 KDM5DQ9BY66 1539 aa20.68■□□□□ 0.9
NSFL1C-201ENST00000216879 CD2BP2O95400 341 aaKnown RBP20.68■□□□□ 0.9
NSFL1C-201ENST00000216879 ADGRL2O95490 1459 aa20.68■□□□□ 0.9
NSFL1C-201ENST00000216879 DISP1Q96F81 1524 aa20.67■□□□□ 0.9
NSFL1C-201ENST00000216879 FAM135AQ9P2D6 1515 aa20.67■□□□□ 0.9
NSFL1C-201ENST00000216879 WDR7Q9Y4E6 1490 aa20.66■□□□□ 0.9
NSFL1C-201ENST00000216879 CAVIN1Q6NZI2 390 aaKnown RBP20.66■□□□□ 0.9
NSFL1C-201ENST00000216879 KIF21AQ7Z4S6 1674 aa20.66■□□□□ 0.9
NSFL1C-201ENST00000216879 MTHFSP49914 203 aa20.66■□□□□ 0.9
NSFL1C-201ENST00000216879 EXOSC9Q06265 439 aaKnown RBP20.66■□□□□ 0.9
NSFL1C-201ENST00000216879 MCTP1Q6DN14 999 aa20.66■□□□□ 0.9
NSFL1C-201ENST00000216879 GOLGA6L22H0YM25 854 aa20.65■□□□□ 0.9
NSFL1C-201ENST00000216879 RUNDC1Q96C34 613 aa20.65■□□□□ 0.9
NSFL1C-201ENST00000216879 SLC12A5Q9H2X9 1139 aa20.65■□□□□ 0.9
NSFL1C-201ENST00000216879 SAFB2Q14151 953 aaKnown RBP eCLIP20.65■□□□□ 0.9
NSFL1C-201ENST00000216879 RAPGEF6Q8TEU7 1601 aa20.64■□□□□ 0.9
NSFL1C-201ENST00000216879 TPM2P07951 284 aa20.64■□□□□ 0.9
NSFL1C-201ENST00000216879 ANKRD45Q5TZF3 282 aa20.64■□□□□ 0.9
NSFL1C-201ENST00000216879 GPRASP1Q5JY77 1395 aa20.64■□□□□ 0.89
NSFL1C-201ENST00000216879 CHAMP1Q96JM3 812 aa20.64■□□□□ 0.89
NSFL1C-201ENST00000216879 PLA2R1Q13018 1463 aa20.63■□□□□ 0.89
NSFL1C-201ENST00000216879 TRAK1Q9UPV9 953 aa20.63■□□□□ 0.89
NSFL1C-201ENST00000216879 APBB1O00213 710 aa20.62■□□□□ 0.89
NSFL1C-201ENST00000216879 FOXD4L6Q3SYB3 417 aaPredicted RBP20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms