RNA–Protein interactions for RNA: ENST00000216378.2

CDKL1-201, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 1 (best) BASIC

Gene CDKL1, Length 2,209 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-201ENST00000216378 STAG3Q9UJ98 1225 aa16.21■□□□□ 0.18
CDKL1-201ENST00000216378 ZNF142P52746 1687 aaPredicted RBP16.2■□□□□ 0.18
CDKL1-201ENST00000216378 STRCQ7RTU9 1775 aa16.19■□□□□ 0.18
CDKL1-201ENST00000216378 CCDC144AA2RUR9 1427 aa16.18■□□□□ 0.18
CDKL1-201ENST00000216378 ADGRB3O60242 1522 aa16.17■□□□□ 0.18
CDKL1-201ENST00000216378 TMEM2Q9UHN6 1383 aa16.16■□□□□ 0.18
CDKL1-201ENST00000216378 CLSPNQ9HAW4 1339 aa16.16■□□□□ 0.18
CDKL1-201ENST00000216378 ZNF326Q5BKZ1 582 aaKnown RBP16.16■□□□□ 0.18
CDKL1-201ENST00000216378 THEMISQ8N1K5 641 aaPredicted RBP16.16■□□□□ 0.18
CDKL1-201ENST00000216378 SPATA31E1Q6ZUB1 1445 aa16.16■□□□□ 0.18
CDKL1-201ENST00000216378 TXNDC2Q86VQ3 553 aa16.15■□□□□ 0.18
CDKL1-201ENST00000216378 HIRIP3Q9BW71 556 aaPredicted RBP16.15■□□□□ 0.18
CDKL1-201ENST00000216378 ZFYVE9O95405 1425 aa16.14■□□□□ 0.17
CDKL1-201ENST00000216378 NEURL4Q96JN8 1562 aa16.13■□□□□ 0.17
CDKL1-201ENST00000216378 ARHGAP23Q9P227 1491 aa16.12■□□□□ 0.17
CDKL1-201ENST00000216378 RIMS2Q9UQ26 1411 aa16.12■□□□□ 0.17
CDKL1-201ENST00000216378 SLC26A8Q96RN1 970 aa16.11■□□□□ 0.17
CDKL1-201ENST00000216378 SLIT1O75093 1534 aa16.11■□□□□ 0.17
CDKL1-201ENST00000216378 ADGRF5Q8IZF2 1346 aa16.11■□□□□ 0.17
CDKL1-201ENST00000216378 ANKLE2Q86XL3 938 aa16.1■□□□□ 0.17
CDKL1-201ENST00000216378 KDM2AQ9Y2K7 1162 aa16.1■□□□□ 0.17
CDKL1-201ENST00000216378 KIF1BO60333 1816 aa16.09■□□□□ 0.17
CDKL1-201ENST00000216378 NEXMIFQ5QGS0 1516 aa16.09■□□□□ 0.17
CDKL1-201ENST00000216378 SCAF11Q99590 1463 aaKnown RBP16.08■□□□□ 0.17
CDKL1-201ENST00000216378 MIER1Q8N108 512 aa16.06■□□□□ 0.16
CDKL1-201ENST00000216378 DCAF11Q8TEB1 546 aa16.06■□□□□ 0.16
CDKL1-201ENST00000216378 L3MBTL2Q969R5 705 aa16.06■□□□□ 0.16
CDKL1-201ENST00000216378 KDM5AP29375 1690 aaKnown RBP16.05■□□□□ 0.16
CDKL1-201ENST00000216378 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
CDKL1-201ENST00000216378 PPP1R15AO75807 674 aaPredicted RBP16.05■□□□□ 0.16
CDKL1-201ENST00000216378 RBM33Q96EV2 1170 aaKnown RBP16.05■□□□□ 0.16
CDKL1-201ENST00000216378 NPHP4O75161 1426 aaPredicted RBP16.05■□□□□ 0.16
CDKL1-201ENST00000216378 BCANQ96GW7 911 aa16.04■□□□□ 0.16
CDKL1-201ENST00000216378 POLR1AO95602 1720 aaPredicted RBP16.04■□□□□ 0.16
CDKL1-201ENST00000216378 EID1Q9Y6B2 187 aa16.04■□□□□ 0.16
CDKL1-201ENST00000216378 NRXN3Q9Y4C0 1643 aa16.02■□□□□ 0.16
CDKL1-201ENST00000216378 ADAMTS13Q76LX8 1427 aa16.02■□□□□ 0.16
CDKL1-201ENST00000216378 DAXXQ9UER7 740 aaPredicted RBP16.02■□□□□ 0.16
CDKL1-201ENST00000216378 PPLO60437 1756 aa16.02■□□□□ 0.16
CDKL1-201ENST00000216378 MED14O60244 1454 aa16.01■□□□□ 0.15
CDKL1-201ENST00000216378 IQGAP1P46940 1657 aa16.01■□□□□ 0.15
CDKL1-201ENST00000216378 YTHDC1Q96MU7 727 aaKnown RBP16■□□□□ 0.15
CDKL1-201ENST00000216378 METP08581 1390 aa16■□□□□ 0.15
CDKL1-201ENST00000216378 IFT172Q9UG01 1749 aa16■□□□□ 0.15
CDKL1-201ENST00000216378 TMEM132EQ6IEE7 984 aa16■□□□□ 0.15
CDKL1-201ENST00000216378 PLEKHG1Q9ULL1 1385 aa15.99■□□□□ 0.15
CDKL1-201ENST00000216378 CFAP70Q5T0N1 1121 aa15.99■□□□□ 0.15
CDKL1-201ENST00000216378 TONSLQ96HA7 1378 aa15.99■□□□□ 0.15
CDKL1-201ENST00000216378 NBPF8Q3BBV2 869 aa15.98■□□□□ 0.15
CDKL1-201ENST00000216378 STRCP1A6NGW2 1772 aa15.98■□□□□ 0.15
CDKL1-201ENST00000216378 PTPRUQ92729 1446 aa15.97■□□□□ 0.15
CDKL1-201ENST00000216378 VGFO15240 615 aaPredicted RBP15.96■□□□□ 0.15
CDKL1-201ENST00000216378 NBPF1Q3BBV0 1214 aa15.96■□□□□ 0.15
CDKL1-201ENST00000216378 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.96■□□□□ 0.15
CDKL1-201ENST00000216378 RPGRIP1LQ68CZ1 1315 aa15.96■□□□□ 0.15
CDKL1-201ENST00000216378 PIK3C2GO75747 1445 aa15.96■□□□□ 0.14
CDKL1-201ENST00000216378 NRXN1Q9ULB1 1477 aa15.93■□□□□ 0.14
CDKL1-201ENST00000216378 ASXL1Q8IXJ9 1541 aa15.93■□□□□ 0.14
CDKL1-201ENST00000216378 ALKQ9UM73 1620 aa15.93■□□□□ 0.14
CDKL1-201ENST00000216378 KCNA6P17658 529 aa15.93■□□□□ 0.14
CDKL1-201ENST00000216378 SETD1AO15047 1707 aaKnown RBP15.93■□□□□ 0.14
CDKL1-201ENST00000216378 SETBP1Q9Y6X0 1596 aa15.93■□□□□ 0.14
CDKL1-201ENST00000216378 STK26Q9P289 416 aa15.92■□□□□ 0.14
CDKL1-201ENST00000216378 HDGFP51858 240 aaKnown RBP15.91■□□□□ 0.14
CDKL1-201ENST00000216378 DMRT2Q9Y5R5 561 aa15.91■□□□□ 0.14
CDKL1-201ENST00000216378 TBX22Q9Y458 520 aa15.91■□□□□ 0.14
CDKL1-201ENST00000216378 MYOM2P54296 1465 aa15.91■□□□□ 0.14
CDKL1-201ENST00000216378 PRAG1Q86YV5 1406 aa15.9■□□□□ 0.14
CDKL1-201ENST00000216378 LTBP4Q8N2S1 1624 aa15.9■□□□□ 0.14
CDKL1-201ENST00000216378 C14orf93Q9H972 538 aaKnown RBP15.9■□□□□ 0.14
CDKL1-201ENST00000216378 AMOTL2Q9Y2J4 779 aa15.9■□□□□ 0.14
CDKL1-201ENST00000216378 DDX10Q13206 875 aaKnown RBP15.89■□□□□ 0.13
CDKL1-201ENST00000216378 WAPLQ7Z5K2 1190 aa15.87■□□□□ 0.13
CDKL1-201ENST00000216378 EIF5BO60841 1220 aaKnown RBP15.86■□□□□ 0.13
CDKL1-201ENST00000216378 ROBO2Q9HCK4 1378 aa15.86■□□□□ 0.13
CDKL1-201ENST00000216378 PLEKHH1Q9ULM0 1364 aa15.86■□□□□ 0.13
CDKL1-201ENST00000216378 ADGRB1O14514 1584 aa15.86■□□□□ 0.13
CDKL1-201ENST00000216378 SAFB2Q14151 953 aaKnown RBP eCLIP15.85■□□□□ 0.13
CDKL1-201ENST00000216378 CHD2O14647 1828 aaKnown RBP15.85■□□□□ 0.13
CDKL1-201ENST00000216378 TRAK1Q9UPV9 953 aa15.84■□□□□ 0.13
CDKL1-201ENST00000216378 LRRC7Q96NW7 1537 aa15.83■□□□□ 0.12
CDKL1-201ENST00000216378 TMEM94Q12767 1356 aa15.82■□□□□ 0.12
CDKL1-201ENST00000216378 PROSER2Q86WR7 435 aaPredicted RBP15.82■□□□□ 0.12
CDKL1-201ENST00000216378 UBE2Q2Q8WVN8 375 aa15.82■□□□□ 0.12
CDKL1-201ENST00000216378 TIMELESSQ9UNS1 1208 aa15.82■□□□□ 0.12
CDKL1-201ENST00000216378 YTHDC2Q9H6S0 1430 aaKnown RBP15.81■□□□□ 0.12
CDKL1-201ENST00000216378 XIRP1Q702N8 1843 aaKnown RBP15.81■□□□□ 0.12
CDKL1-201ENST00000216378 XRN1Q8IZH2 1706 aaKnown RBP15.81■□□□□ 0.12
CDKL1-201ENST00000216378 DIP2AQ14689 1571 aa15.8■□□□□ 0.12
CDKL1-201ENST00000216378 NWD1Q149M9 1564 aa15.8■□□□□ 0.12
CDKL1-201ENST00000216378 CERKQ8TCT0 537 aa15.79■□□□□ 0.12
CDKL1-201ENST00000216378 TRPM1Q7Z4N2 1603 aa15.79■□□□□ 0.12
CDKL1-201ENST00000216378 LRPPRCP42704 1394 aaKnown RBP15.78■□□□□ 0.12
CDKL1-201ENST00000216378 PRAM1Q96QH2 718 aa15.78■□□□□ 0.12
CDKL1-201ENST00000216378 ANO8Q9HCE9 1232 aaPredicted RBP15.78■□□□□ 0.12
CDKL1-201ENST00000216378 ROCK2O75116 1388 aaKnown RBP15.77■□□□□ 0.12
CDKL1-201ENST00000216378 HSPA5P11021 654 aaKnown RBP15.77■□□□□ 0.12
CDKL1-201ENST00000216378 PIK3R4Q99570 1358 aa15.76■□□□□ 0.11
CDKL1-201ENST00000216378 NUTM2FA1L443 756 aa15.75■□□□□ 0.11
CDKL1-201ENST00000216378 ABCC11Q96J66 1382 aa15.75■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms